FFCP PHASE1:Hg19::chr5:121411232..121411247,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:121411232..121411247,- | |||
|coexpression_cluster_id=C421 | |coexpression_cluster_id=C421 | ||
|description=CAGE_peak_at_chr5:121411232..121411247,- | |description=CAGE_peak_at_chr5:121411232..121411247,- | ||
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|ontology_enrichment_celltype=CL:0000055!2.88e-24!180;CL:0000057!8.67e-22!75;CL:0002334!4.28e-14!12;CL:0002620!1.23e-13!23;CL:0000048!9.29e-13!430;CL:0000723!4.19e-12!436;CL:0000034!2.87e-11!444;CL:0000680!1.91e-08!57;CL:0000056!1.91e-08!57;CL:0000355!1.91e-08!57;CL:0000144!9.53e-08!625;CL:0000187!1.08e-07!54;CL:0000393!1.11e-07!60;CL:0000211!1.11e-07!60;CL:0000192!1.24e-07!42;CL:0000514!1.24e-07!42;CL:0000222!3.66e-07!119 | |ontology_enrichment_celltype=CL:0000055!2.88e-24!180;CL:0000057!8.67e-22!75;CL:0002334!4.28e-14!12;CL:0002620!1.23e-13!23;CL:0000048!9.29e-13!430;CL:0000723!4.19e-12!436;CL:0000034!2.87e-11!444;CL:0000680!1.91e-08!57;CL:0000056!1.91e-08!57;CL:0000355!1.91e-08!57;CL:0000144!9.53e-08!625;CL:0000187!1.08e-07!54;CL:0000393!1.11e-07!60;CL:0000211!1.11e-07!60;CL:0000192!1.24e-07!42;CL:0000514!1.24e-07!42;CL:0000222!3.66e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002334;4.23e-18;12!CL:0000135;5.68e-12;3!CL:0000388;5.68e-12;3!CL:0002579;9.87e-12;3!CL:1000306;2.75e-09;4!CL:0002547;2.75e-09;4!CL:0002195;6.43e-08;2!CL:0002571;6.43e-08;2!CL:0002620;9.30e-07;23 | |ontology_enrichment_celltype_v019=CL:0002334;4.23e-18;12!CL:0000135;5.68e-12;3!CL:0000388;5.68e-12;3!CL:0002579;9.87e-12;3!CL:1000306;2.75e-09;4!CL:0002547;2.75e-09;4!CL:0002195;6.43e-08;2!CL:0002571;6.43e-08;2!CL:0002620;9.30e-07;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002334,6.50e-18,12;CL:0000057,3.92e-16,76;CL:0000135,3.09e-12,3;CL:0000388,3.09e-12,3;CL:0002579,1.51e-11,3;CL:1000306,2.24e-09,4;CL:0002547,2.24e-09,4;CL:0002195,1.40e-07,2;CL:0002571,1.40e-07,2;CL:0000134,4.03e-07,354;CL:0002620,6.10e-07,23;CL:0002320,8.15e-07,361 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!1.34e-09!14;DOID:17!9.79e-07!5;DOID:450!9.79e-07!5;DOID:66!9.79e-07!5;DOID:423!9.79e-07!5;DOID:0080000!9.79e-07!5;DOID:11722!9.79e-07!5 | |ontology_enrichment_disease=DOID:2394!1.34e-09!14;DOID:17!9.79e-07!5;DOID:450!9.79e-07!5;DOID:66!9.79e-07!5;DOID:423!9.79e-07!5;DOID:0080000!9.79e-07!5;DOID:11722!9.79e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:0060084;2.50e-12;3!DOID:127;2.50e-12;3!DOID:0060072;2.40e-09;4!DOID:17;4.33e-07;5!DOID:450;4.33e-07;5!DOID:66;4.33e-07;5!DOID:423;4.33e-07;5!DOID:0080000;4.33e-07;5!DOID:11722;4.33e-07;5 | |ontology_enrichment_disease_v019=DOID:0060084;2.50e-12;3!DOID:127;2.50e-12;3!DOID:0060072;2.40e-09;4!DOID:17;4.33e-07;5!DOID:450;4.33e-07;5!DOID:66;4.33e-07;5!DOID:423;4.33e-07;5!DOID:0080000;4.33e-07;5!DOID:11722;4.33e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.37e-12,3;DOID:127,2.37e-12,3;DOID:0060072,2.31e-09,4;DOID:17,3.06e-07,5;DOID:450,3.06e-07,5;DOID:66,3.06e-07,5;DOID:423,3.06e-07,5;DOID:0080000,3.06e-07,5;DOID:11722,3.06e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.07e-08!45;UBERON:0002416!1.07e-08!45;UBERON:0002097!2.16e-08!40;UBERON:0003688!6.02e-08!6;UBERON:0002358!6.02e-08!6;UBERON:0003684!6.02e-08!6;UBERON:0001178!6.02e-08!6;UBERON:0004290!9.30e-08!70;UBERON:0001134!2.20e-07!61;UBERON:0002036!2.20e-07!61;UBERON:0003082!2.20e-07!61;UBERON:0000486!3.54e-07!82;UBERON:0002385!6.51e-07!63;UBERON:0001015!6.51e-07!63;UBERON:0000383!6.51e-07!63 | |ontology_enrichment_uberon=UBERON:0002199!1.07e-08!45;UBERON:0002416!1.07e-08!45;UBERON:0002097!2.16e-08!40;UBERON:0003688!6.02e-08!6;UBERON:0002358!6.02e-08!6;UBERON:0003684!6.02e-08!6;UBERON:0001178!6.02e-08!6;UBERON:0004290!9.30e-08!70;UBERON:0001134!2.20e-07!61;UBERON:0002036!2.20e-07!61;UBERON:0003082!2.20e-07!61;UBERON:0000486!3.54e-07!82;UBERON:0002385!6.51e-07!63;UBERON:0001015!6.51e-07!63;UBERON:0000383!6.51e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.78e-15;6!UBERON:0002358;1.78e-15;6!UBERON:0003684;1.78e-15;6!UBERON:0001178;1.78e-15;6!UBERON:0004457;2.88e-14;9!UBERON:0000042;2.88e-14;9!UBERON:0007846;5.68e-12;3!UBERON:0000043;5.68e-12;3!UBERON:0007845;5.68e-12;3!UBERON:0004797;2.75e-09;4!UBERON:0000415;2.75e-09;4!UBERON:0007240;2.75e-09;4!UBERON:0005742;2.75e-09;4!UBERON:0005734;2.75e-09;4!UBERON:0004664;2.75e-09;4!UBERON:0004663;2.75e-09;4!UBERON:0005406;6.43e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0003688;1.78e-15;6!UBERON:0002358;1.78e-15;6!UBERON:0003684;1.78e-15;6!UBERON:0001178;1.78e-15;6!UBERON:0004457;2.88e-14;9!UBERON:0000042;2.88e-14;9!UBERON:0007846;5.68e-12;3!UBERON:0000043;5.68e-12;3!UBERON:0007845;5.68e-12;3!UBERON:0004797;2.75e-09;4!UBERON:0000415;2.75e-09;4!UBERON:0007240;2.75e-09;4!UBERON:0005742;2.75e-09;4!UBERON:0005734;2.75e-09;4!UBERON:0004664;2.75e-09;4!UBERON:0004663;2.75e-09;4!UBERON:0005406;6.43e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.78e-15,6;UBERON:0002358,2.78e-15,6;UBERON:0003684,2.78e-15,6;UBERON:0001178,2.78e-15,6;UBERON:0007846,3.09e-12,3;UBERON:0000043,3.09e-12,3;UBERON:0007845,3.09e-12,3;UBERON:0004457,1.78e-10,12;UBERON:0000042,1.78e-10,12;UBERON:0000415,2.24e-09,4;UBERON:0007240,2.24e-09,4;UBERON:0005742,2.24e-09,4;UBERON:0005734,2.24e-09,4;UBERON:0004664,2.24e-09,4;UBERON:0004663,2.24e-09,4;UBERON:0005406,4.51e-08,2;UBERON:0002384,5.54e-07,371 | |||
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| ||
|short_description=p@chr5:121411232..121411247,- | |short_description=p@chr5:121411232..121411247,- | ||
}} | }} |
Latest revision as of 09:07, 30 July 2015
Short description: | p@chr5:121411232..121411247, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:121411232..121411247, - |
Coexpression cluster: | C421_Smooth_Fibroblast_epithelioid_hepatic_Sertoli_Ewing_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 6.50e-18 | 12 |
fibroblast | 3.92e-16 | 76 |
fibrocyte | 3.09e-12 | 3 |
tendon cell | 3.09e-12 | 3 |
omentum preadipocyte | 1.51e-11 | 3 |
fibroblast of tunica adventitia of artery | 2.24e-09 | 4 |
fibroblast of the aortic adventitia | 2.24e-09 | 4 |
hepatic stem cell | 1.40e-07 | 2 |
hepatic mesenchymal stem cell | 1.40e-07 | 2 |
mesenchymal cell | 4.03e-07 | 354 |
skin fibroblast | 6.10e-07 | 23 |
connective tissue cell | 8.15e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.78e-15 | 6 |
peritoneum | 2.78e-15 | 6 |
abdominal cavity | 2.78e-15 | 6 |
visceral peritoneum | 2.78e-15 | 6 |
dense regular connective tissue | 3.09e-12 | 3 |
tendon | 3.09e-12 | 3 |
regular connective tissue | 3.09e-12 | 3 |
cavity lining | 1.78e-10 | 12 |
serous membrane | 1.78e-10 | 12 |
artery wall | 2.24e-09 | 4 |
tunica adventitia of artery | 2.24e-09 | 4 |
adventitia | 2.24e-09 | 4 |
tunica adventitia of blood vessel | 2.24e-09 | 4 |
aorta tunica adventitia | 2.24e-09 | 4 |
aorta wall | 2.24e-09 | 4 |
perirenal fat | 4.51e-08 | 2 |
connective tissue | 5.54e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.37e-12 | 3 |
leiomyoma | 2.37e-12 | 3 |
benign neoplasm | 2.31e-09 | 4 |
musculoskeletal system disease | 3.06e-07 | 5 |
myotonic disease | 3.06e-07 | 5 |
muscle tissue disease | 3.06e-07 | 5 |
myopathy | 3.06e-07 | 5 |
muscular disease | 3.06e-07 | 5 |
myotonic dystrophy | 3.06e-07 | 5 |