FFCP PHASE1:Hg19::chr5:121400446..121400468,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:121400446..121400468,- | |||
|coexpression_cluster_id=C421 | |||
|description=CAGE_peak_at_chr5:121400446..121400468,- | |||
|id=chr5:121400446..121400468,- | |||
|ontology_enrichment_celltype=CL:0000055!3.75e-29!180;CL:0000057!4.55e-22!75;CL:0002620!6.94e-12!23;CL:0002334!9.62e-11!12;CL:0000680!1.61e-10!57;CL:0000056!1.61e-10!57;CL:0000355!1.61e-10!57;CL:0000048!3.26e-10!430;CL:0000222!9.33e-10!119;CL:0000723!1.55e-09!436;CL:0000187!4.97e-09!54;CL:0000034!5.85e-09!444;CL:0000144!1.62e-08!625;CL:0000192!2.25e-08!42;CL:0000514!2.25e-08!42;CL:0002371!7.62e-08!591;CL:0000393!1.06e-07!60;CL:0000211!1.06e-07!60;CL:0000183!1.85e-07!59;CL:0000359!9.34e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002334;6.29e-11;12!CL:0000135;9.70e-09;3!CL:0000388;9.70e-09;3!CL:0000153;1.18e-08;9!CL:0000447;1.18e-08;9!CL:0002620;4.87e-08;23!CL:0002580;5.53e-08;3!CL:0000499;8.85e-08;28!CL:0000057;6.18e-07;73!CL:0002579;7.24e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.80e-20,76;CL:0002334,5.12e-11,12;CL:0000048,8.06e-10,427;CL:0000723,1.89e-09,433;CL:0000153,5.56e-09,9;CL:0000447,5.56e-09,9;CL:0000034,5.63e-09,441;CL:0000134,8.98e-09,354;CL:0000135,1.04e-08,3;CL:0000388,1.04e-08,3;CL:0002320,2.51e-08,361;CL:0002620,3.79e-08,23;CL:0002580,5.99e-08,3;CL:0000499,7.40e-08,28;CL:0000219,2.88e-07,386;CL:0002579,4.65e-07,3;CL:0000136,9.11e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.58e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:17;1.14e-07;5!DOID:450;1.14e-07;5!DOID:66;1.14e-07;5!DOID:423;1.14e-07;5!DOID:0080000;1.14e-07;5!DOID:11722;1.14e-07;5!DOID:2394;6.92e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.95e-08,5;DOID:450,7.95e-08,5;DOID:66,7.95e-08,5;DOID:423,7.95e-08,5;DOID:0080000,7.95e-08,5;DOID:11722,7.95e-08,5;DOID:2394,7.33e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!9.80e-10!61;UBERON:0002036!9.80e-10!61;UBERON:0003082!9.80e-10!61;UBERON:0004290!1.42e-09!70;UBERON:0000914!2.97e-09!83;UBERON:0002329!2.97e-09!83;UBERON:0003077!2.97e-09!83;UBERON:0003059!2.97e-09!83;UBERON:0007282!2.97e-09!83;UBERON:0009618!2.97e-09!83;UBERON:0007285!2.97e-09!83;UBERON:0002385!4.44e-09!63;UBERON:0001015!4.44e-09!63;UBERON:0000383!4.44e-09!63;UBERON:0002199!4.39e-08!45;UBERON:0002416!4.39e-08!45;UBERON:0000486!6.21e-08!82;UBERON:0002049!1.64e-07!79;UBERON:0007798!1.64e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.31e-11;9!UBERON:0000042;1.31e-11;9!UBERON:0003688;2.57e-09;6!UBERON:0002358;2.57e-09;6!UBERON:0003684;2.57e-09;6!UBERON:0001178;2.57e-09;6!UBERON:0007846;9.70e-09;3!UBERON:0000043;9.70e-09;3!UBERON:0007845;9.70e-09;3!UBERON:0001013;4.78e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.74e-09,6;UBERON:0002358,1.74e-09,6;UBERON:0003684,1.74e-09,6;UBERON:0001178,1.74e-09,6;UBERON:0002384,6.86e-09,371;UBERON:0007846,1.04e-08,3;UBERON:0000043,1.04e-08,3;UBERON:0007845,1.04e-08,3;UBERON:0004457,1.18e-08,12;UBERON:0000042,1.18e-08,12;UBERON:0001013,3.89e-07,14 | |||
|phase1_expression=2.72517568905835,0.214100523890983,0.986680828671798,7.00513088471913,2.68176656656373,6.10636966870258,0,1.26343974685366,0.261185628199839,0,0.697801167972428,0,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0.730310090387373,0.975865597581014,0.369363174230364,0,0.313454721478088,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.02290049474824,2.1686349143074,1.50401373190767,3.18662341713812,0,1.94653948121054,0.189069634328136,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0.208994966536811,1.29208379584664,0.35576626268671,0.33472061276467,0,0.760272105718513,0.488124115096339,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,3.97577561356255,1.13967460498122,2.78059279707759,5.44989579422746,0.354668382198357,0,1.06748995729705,0,0,0.134710672069688,0.163461903113459,0.454072282934794,1.15235184896,0,0,0.570471821544449,0.298897361103602,0,0.485618833104395,0.421352420106746,0.204154171254893,0,0,1.18800285728205,0.989067717114227,0,0,0,0,0.277064115484183,0,2.14541457059314,0.901428353439581,0.340296549480063,4.66413052791041,1.92201649936711,1.27159140695737,3.00091096084402,0.103052529238439,2.83404594050192,0.744467425326359,2.53164498361899,1.07180705677318,3.28163906517349,1.38074847963449,0.969876340912871,2.84007674013291,0.705264687593482,0.508681776931463,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,3.25057549622385,0.721879481669586,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0,1.29149563659404,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0.1466765716419,1.42198887333556,0,0.845302752556,0.531876233169741,1.04007436911366,0,0,0,2.00169191121407,0.542621605391443,0,0,1.06617584622764,0,0,0.871533458600294,1.29964888536674,0,0,0,0.718874566474748,0,0,4.1986578933598,0.821905290201534,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0,1.45579603071565,2.67643483195743,1.26161932027148,1.28855556491985,0.601892199455438,0,0,0.664225598535437,0.184369168541703,0.521301686808497,0,0,0,0,0,0,0,0,2.48107807818777,2.30192959932094,3.92924132206303,1.79394808957981,1.02341449813341,1.93024705372329,4.45254199334973,0.925258162815933,1.24293207719189,0.492762936082855,0.519254429183621,0.929683027679674,0,0,0,0.114814448164607,1.0925470080403,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0.863663664408557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21367859688319,0.193341436584244,0,0.15350367472613,0,0.214840489736547,0.290033387828457,0,0.0890320356467374,0,0,0,0.10115778085555,3.253918845081,11.0184321390724,0.6970372701606,0,0,0,0.18532421910392,0.429374660225974,0,0.632758849437452,0.571890581771475,0.255897791311334,1.28381696410176,0,0,1.2591072030832,0.274537029736055,0.235624804691373,0.606547444719948,1.58510321173008,0,0,0.974853958525138,0,0,0.424216295861138,1.13008116620243,0.551365343546124,0.66343897524122,0.438450885253763,0.578775534266688,0.655894752046633,0,0,0,0.286822704408103,0.687743287091848,0.35667105148125,0,1.89996871767898,4.93942339439853,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0.222617410045812,0,0,0,0,0,0,0,5.59871257791253,0,0,0,0.0986434056369336,0,4.44547960578548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.278847488557207,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0.330991955875499,0,0,0,0,0,0,0,0,7.56738542875113,0,0,0,0,0,0.225980740780532,0.137041924646751,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0.543616824294456,0.104602846312333,0,0,0,0,0,2.57859264851974,0,0,0,0.717873024576814,0,0,0,0,1.08089965062721,0,0,0.0824158583811665,0,0,0,0.795229689809303,0,0,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0.211200673038813,0,0,0,0,0,2.71499800876856,0.864221491201268,0.979762080328227,0,0,0.340776043570843,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,1.19403842309499,0.934853239388898,2.77402930751307,0.947015026375446,1.0062716070103,0,0.457680136793847,1.05861646634267,0.310874401165561,0.147855149989634,0.796483835818512,0,0.621051827505038,1.24411862352257,3.72178400381193,0.521745061811734,1.6528336989694,1.14241563650639,2.03435366602331,1.09109195521536,0.537052785212442,0.464033759878494,2.78667122089031,0,1.37358282073117,1.34699795506368,0,0,0,0,0.226705925512272,1.15761237161917,0.244736704506468,1.07453304648892,0,0,1.76689145945881,0.578742114812744,1.18259708457151,0,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,1.59002175326709,0,0,1.05802783107205,0.918736432059601,0,0,0,0,0.2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| |||
|short_description=p@chr5:121400446..121400468,- | |||
}} |
Latest revision as of 09:06, 30 July 2015
Short description: | p@chr5:121400446..121400468, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:121400446..121400468, - |
Coexpression cluster: | C421_Smooth_Fibroblast_epithelioid_hepatic_Sertoli_Ewing_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.80e-20 | 76 |
preadipocyte | 5.12e-11 | 12 |
multi fate stem cell | 8.06e-10 | 427 |
somatic stem cell | 1.89e-09 | 433 |
GAG secreting cell | 5.56e-09 | 9 |
carbohydrate secreting cell | 5.56e-09 | 9 |
stem cell | 5.63e-09 | 441 |
mesenchymal cell | 8.98e-09 | 354 |
fibrocyte | 1.04e-08 | 3 |
tendon cell | 1.04e-08 | 3 |
connective tissue cell | 2.51e-08 | 361 |
skin fibroblast | 3.79e-08 | 23 |
preadipocyte of the breast | 5.99e-08 | 3 |
stromal cell | 7.40e-08 | 28 |
motile cell | 2.88e-07 | 386 |
omentum preadipocyte | 4.65e-07 | 3 |
fat cell | 9.11e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.74e-09 | 6 |
peritoneum | 1.74e-09 | 6 |
abdominal cavity | 1.74e-09 | 6 |
visceral peritoneum | 1.74e-09 | 6 |
connective tissue | 6.86e-09 | 371 |
dense regular connective tissue | 1.04e-08 | 3 |
tendon | 1.04e-08 | 3 |
regular connective tissue | 1.04e-08 | 3 |
cavity lining | 1.18e-08 | 12 |
serous membrane | 1.18e-08 | 12 |
adipose tissue | 3.89e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.95e-08 | 5 |
myotonic disease | 7.95e-08 | 5 |
muscle tissue disease | 7.95e-08 | 5 |
myopathy | 7.95e-08 | 5 |
muscular disease | 7.95e-08 | 5 |
myotonic dystrophy | 7.95e-08 | 5 |
ovarian cancer | 7.33e-07 | 14 |