FFCP PHASE1:Hg19::chr5:115368162..115368176,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:115368162..115368176,+ | |||
|coexpression_cluster_id=C52 | |coexpression_cluster_id=C52 | ||
|description=CAGE_peak_at_chr5:115368162..115368176,+ | |description=CAGE_peak_at_chr5:115368162..115368176,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000159!3.24e-07!2 | |ontology_enrichment_celltype=CL:0000159!3.24e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002379;2.21e-15;1!CL:0002149;1.39e-10;6!CL:0002255;1.39e-10;6!CL:0002097;1.29e-08;2!CL:0002593;2.40e-08;2 | |ontology_enrichment_celltype_v019=CL:0002379;2.21e-15;1!CL:0002149;1.39e-10;6!CL:0002255;1.39e-10;6!CL:0002097;1.29e-08;2!CL:0002593;2.40e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002379,1.54e-15,1;CL:0002149,1.36e-10,6;CL:0002255,1.36e-10,6;CL:0002097,1.29e-08,2;CL:0002593,2.48e-08,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!3.49e-12!106;DOID:299!1.56e-10!25;DOID:14566!1.85e-09!239;DOID:162!3.73e-09!235;DOID:0050687!5.45e-09!143;DOID:193!1.48e-08!29;DOID:120!1.51e-07!27;DOID:4468!3.05e-07!2 | |ontology_enrichment_disease=DOID:305!3.49e-12!106;DOID:299!1.56e-10!25;DOID:14566!1.85e-09!239;DOID:162!3.73e-09!235;DOID:0050687!5.45e-09!143;DOID:193!1.48e-08!29;DOID:120!1.51e-07!27;DOID:4468!3.05e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:3620;2.21e-15;1!DOID:3565;2.21e-15;1!DOID:299;2.86e-14;25!DOID:3001;1.39e-10;6!DOID:4468;2.40e-08;2!DOID:4929;2.40e-08;2 | |ontology_enrichment_disease_v019=DOID:3620;2.21e-15;1!DOID:3565;2.21e-15;1!DOID:299;2.86e-14;25!DOID:3001;1.39e-10;6!DOID:4468;2.40e-08;2!DOID:4929;2.40e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3620,1.54e-15,1;DOID:3565,1.54e-15,1;DOID:299,2.90e-14,25;DOID:3001,1.36e-10,6;DOID:305,5.51e-10,106;DOID:4468,2.15e-08,2;DOID:4929,2.87e-08,2;DOID:0050687,3.74e-07,143 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004913;2.21e-15;1!UBERON:0003703;2.21e-15;1!UBERON:0001174;2.21e-15;1!UBERON:0004914;2.21e-15;1!UBERON:0002456;2.40e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0004913;2.21e-15;1!UBERON:0003703;2.21e-15;1!UBERON:0001174;2.21e-15;1!UBERON:0004914;2.21e-15;1!UBERON:0002456;2.40e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,3.17e-15,1;UBERON:0003703,3.17e-15,1;UBERON:0001174,3.17e-15,1;UBERON:0004914,3.17e-15,1;UBERON:0002456,2.48e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03423704220986,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,1.21856744815642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.670854344285,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0.20453736500431,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,2.13213910407454,0,0,0,0,0,0,0,0,0.421996129056054,1.63232808159148,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0.609414446062818,0,0.343972064943233,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,3.19695375331408,0,0,0,0.432164393964449,0,0,0,0,0.101998217636322,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6468607378872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.966695013382396,0,0,0.400027764663154,0,0,0,25.2331977833567,0,0,0.453411851024545,0,0.97894681802587,0.179088841081487,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07962490351128,0,0,0.231051332300676,0,0,0,0,0,0,0,0.49131575253029,1.03499260351932,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0,0,0.215927591218621,1.43325506366115,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0.22910686854405,2.79185747097888,4.77769469488717,0.894843454382338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320965466756673,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03423704220986,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,1.21856744815642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.670854344285,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0.20453736500431,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,2.13213910407454,0,0,0,0,0,0,0,0,0.421996129056054,1.63232808159148,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0.609414446062818,0,0.343972064943233,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,3.19695375331408,0,0,0,0.432164393964449,0,0,0,0,0.101998217636322,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6468607378872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.966695013382396,0,0,0.400027764663154,0,0,0,25.2331977833567,0,0,0.453411851024545,0,0.97894681802587,0.179088841081487,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07962490351128,0,0,0.231051332300676,0,0,0,0,0,0,0,0.49131575253029,1.03499260351932,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0,0,0.215927591218621,1.43325506366115,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0.22910686854405,2.79185747097888,4.77769469488717,0.894843454382338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320965466756673,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:115368162..115368176,+ | |short_description=p@chr5:115368162..115368176,+ | ||
}} | }} |
Latest revision as of 08:54, 30 July 2015
Short description: | p@chr5:115368162..115368176, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:115368162..115368176, + |
Coexpression cluster: | C52_adult_NK_chronic_cord_testis_embryonic_myeloma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 1.54e-15 | 1 |
epithelial cell of uterus | 1.36e-10 | 6 |
stromal cell of endometrium | 1.36e-10 | 6 |
cortical cell of adrenal gland | 1.29e-08 | 2 |
smooth muscle cell of the internal thoracic artery | 2.48e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 3.17e-15 | 1 |
extrahepatic bile duct | 3.17e-15 | 1 |
common bile duct | 3.17e-15 | 1 |
duodenal papilla | 3.17e-15 | 1 |
internal thoracic artery | 2.48e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.54e-15 | 1 |
meningioma | 1.54e-15 | 1 |
adenocarcinoma | 2.90e-14 | 25 |
female reproductive endometrioid cancer | 1.36e-10 | 6 |
carcinoma | 5.51e-10 | 106 |
clear cell adenocarcinoma | 2.15e-08 | 2 |
tubular adenocarcinoma | 2.87e-08 | 2 |
cell type cancer | 3.74e-07 | 143 |