FFCP PHASE1:Hg19::chr5:110576837..110576844,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:110576837..110576844,+ | |||
|coexpression_cluster_id=C1473 | |||
|description=CAGE_peak_at_chr5:110576837..110576844,+ | |||
|id=chr5:110576837..110576844,+ | |||
|ontology_enrichment_celltype=CL:0000084!9.16e-24!25;CL:0000827!9.16e-24!25;CL:0000542!2.16e-18!53;CL:0000051!2.16e-18!53;CL:0000791!4.98e-18!18;CL:0000789!4.98e-18!18;CL:0002420!4.98e-18!18;CL:0002419!4.98e-18!18;CL:0000790!4.98e-18!18;CL:0000838!1.75e-17!52;CL:0000624!1.46e-10!6;CL:0002087!5.76e-10!119;CL:0000625!6.92e-09!11;CL:0000738!4.51e-08!140 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.98e-29;18!CL:0000789;7.98e-29;18!CL:0002419;7.98e-29;18!CL:0000084;1.89e-24;25!CL:0000624;2.11e-23;6!CL:0000815;2.83e-12;2!CL:0000792;2.83e-12;2!CL:0002677;2.83e-12;2!CL:0000625;3.83e-12;11!CL:0000898;1.83e-08;3!CL:0000623;3.22e-08;3!CL:0000542;4.06e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.95e-29,18;CL:0000789,5.95e-29,18;CL:0002420,5.95e-29,18;CL:0002419,5.95e-29,18;CL:0000790,5.95e-29,18;CL:0000084,1.86e-24,25;CL:0000827,1.86e-24,25;CL:0000624,1.68e-23,6;CL:0000838,3.90e-15,52;CL:0000542,8.46e-15,53;CL:0000051,8.46e-15,53;CL:0000815,2.27e-12,2;CL:0000792,2.27e-12,2;CL:0002677,2.27e-12,2;CL:0000625,3.40e-12,11;CL:0000898,1.58e-08,3;CL:0000623,2.84e-08,3;CL:0000825,2.84e-08,3;CL:0002087,1.95e-07,115;CL:0000738,8.63e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;7.98e-29;18!UBERON:0006215;1.83e-08;3!CL:0000051;4.06e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.63e-11!115;UBERON:0002020!7.79e-09!34;UBERON:0003528!7.79e-09!34;UBERON:0000178!8.40e-09!15;UBERON:0000179!8.40e-09!15;UBERON:0000463!8.40e-09!15;UBERON:0003075!8.93e-08!86;UBERON:0007284!8.93e-08!86;UBERON:0002346!1.07e-07!90;UBERON:0002791!3.29e-07!33;UBERON:0001049!3.79e-07!57;UBERON:0005068!3.79e-07!57;UBERON:0006241!3.79e-07!57;UBERON:0007135!3.79e-07!57;UBERON:0001893!6.85e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0,0,0.152826811495903,0.328402357799783,0.314843125254717,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0,0,0.868043482863407,0,0,0,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0.376484679085209,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,1.5644487552606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.73748563216283,6.6811829667358,1.43921049299656,0.167186495390678,2.60737813306872,3.78758244587787,5.84480185223734,0.668462741311041,2.65145316727353,1.99380505125259,2.16643091012012,1.0247305578054,0.780356085359269,2.46656856905514,2.48715016007264,0.289803085735052,1.63115219478266,2.1403266247177,5.22677619024884,1.13309342697566,0.383220493601921,0.68725489096526,1.26509846009751,1.59282707162048,0,0,0.752875595388864,0.511946444617674,0,1.18388626022008,0.821127996921047,2.01606743224732,1.60464117470104,2.75166367377318,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0,0,0,0.324547393654683,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.591092280605782,2.15627574859517,1.66845947163673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.620304078368662,1.94142780736755,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,1.13929437434833,0.238231775457789,0.411362273086194,0.648473311192717,0,3.17250070517708,0,0,0,0.371606350251437,0,0.711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0.276283915531148,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0.291604613383254,0,0,1.5677537021303,0,2.76448149828062,2.65992857058193,0.219385397153973,0,0,0,0.227884111694002,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0.426905989478705,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0.788662062837943,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0.129282956361551,0.13223260174269,0,0,0.213574825135389,0,0.828478110694391,0.496166021811951,0.592834895693833,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.554645257684261,0,0,0,0,0.570930667089935,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0.383683113910955,0.431299245586727,0,1.09209638192014,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0.205116364240755,0.252071696221718,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09394961803644,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.131545547125698,0,0,0.078493092850514,0.785577949580009,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0.467878926924211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0.20686599172379,0,0.23806443146374,0.322944549180031,1.24149428591716,0,0,0,0,0,0.0673520530145875,0,0,0,0.320182037633146,0,0,0,0,0.406896178315738,0,0.402547587182052,0.320568492303233 | |||
|short_description=p@chr5:110576837..110576844,+ | |||
}} |
Latest revision as of 08:41, 30 July 2015
Short description: | p@chr5:110576837..110576844, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:110576837..110576844, + |
Coexpression cluster: | C1473_CD4_cerebellum_thymus_neuroblastoma_CD8_Peripheral_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.95e-29 | 18 |
alpha-beta T cell | 5.95e-29 | 18 |
immature T cell | 5.95e-29 | 18 |
mature T cell | 5.95e-29 | 18 |
immature alpha-beta T cell | 5.95e-29 | 18 |
T cell | 1.86e-24 | 25 |
pro-T cell | 1.86e-24 | 25 |
CD4-positive, alpha-beta T cell | 1.68e-23 | 6 |
lymphoid lineage restricted progenitor cell | 3.90e-15 | 52 |
lymphocyte | 8.46e-15 | 53 |
common lymphoid progenitor | 8.46e-15 | 53 |
regulatory T cell | 2.27e-12 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.27e-12 | 2 |
naive regulatory T cell | 2.27e-12 | 2 |
CD8-positive, alpha-beta T cell | 3.40e-12 | 11 |
naive T cell | 1.58e-08 | 3 |
natural killer cell | 2.84e-08 | 3 |
pro-NK cell | 2.84e-08 | 3 |
nongranular leukocyte | 1.95e-07 | 115 |
leukocyte | 8.63e-07 | 136 |