FFCP PHASE1:Hg19::chr5:110576837..110576844,+: Difference between revisions
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|id=chr5:110576837..110576844,+
|short_description=p@chr5:110576837..110576844,+
|description=CAGE_peak_at_chr5:110576837..110576844,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:110576837..110576844,+ | |||
|coexpression_cluster_id=C1473 | |||
|description=CAGE_peak_at_chr5:110576837..110576844,+ | |||
|id=chr5:110576837..110576844,+ | |||
|ontology_enrichment_celltype=CL:0000084!9.16e-24!25;CL:0000827!9.16e-24!25;CL:0000542!2.16e-18!53;CL:0000051!2.16e-18!53;CL:0000791!4.98e-18!18;CL:0000789!4.98e-18!18;CL:0002420!4.98e-18!18;CL:0002419!4.98e-18!18;CL:0000790!4.98e-18!18;CL:0000838!1.75e-17!52;CL:0000624!1.46e-10!6;CL:0002087!5.76e-10!119;CL:0000625!6.92e-09!11;CL:0000738!4.51e-08!140 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.98e-29;18!CL:0000789;7.98e-29;18!CL:0002419;7.98e-29;18!CL:0000084;1.89e-24;25!CL:0000624;2.11e-23;6!CL:0000815;2.83e-12;2!CL:0000792;2.83e-12;2!CL:0002677;2.83e-12;2!CL:0000625;3.83e-12;11!CL:0000898;1.83e-08;3!CL:0000623;3.22e-08;3!CL:0000542;4.06e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.95e-29,18;CL:0000789,5.95e-29,18;CL:0002420,5.95e-29,18;CL:0002419,5.95e-29,18;CL:0000790,5.95e-29,18;CL:0000084,1.86e-24,25;CL:0000827,1.86e-24,25;CL:0000624,1.68e-23,6;CL:0000838,3.90e-15,52;CL:0000542,8.46e-15,53;CL:0000051,8.46e-15,53;CL:0000815,2.27e-12,2;CL:0000792,2.27e-12,2;CL:0002677,2.27e-12,2;CL:0000625,3.40e-12,11;CL:0000898,1.58e-08,3;CL:0000623,2.84e-08,3;CL:0000825,2.84e-08,3;CL:0002087,1.95e-07,115;CL:0000738,8.63e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;7.98e-29;18!UBERON:0006215;1.83e-08;3!CL:0000051;4.06e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.63e-11!115;UBERON:0002020!7.79e-09!34;UBERON:0003528!7.79e-09!34;UBERON:0000178!8.40e-09!15;UBERON:0000179!8.40e-09!15;UBERON:0000463!8.40e-09!15;UBERON:0003075!8.93e-08!86;UBERON:0007284!8.93e-08!86;UBERON:0002346!1.07e-07!90;UBERON:0002791!3.29e-07!33;UBERON:0001049!3.79e-07!57;UBERON:0005068!3.79e-07!57;UBERON:0006241!3.79e-07!57;UBERON:0007135!3.79e-07!57;UBERON:0001893!6.85e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr5:110576837..110576844,+ | |||
}} | }} |
Latest revision as of 08:41, 30 July 2015
Short description: | p@chr5:110576837..110576844, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:110576837..110576844, + |
Coexpression cluster: | C1473_CD4_cerebellum_thymus_neuroblastoma_CD8_Peripheral_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.95e-29 | 18 |
alpha-beta T cell | 5.95e-29 | 18 |
immature T cell | 5.95e-29 | 18 |
mature T cell | 5.95e-29 | 18 |
immature alpha-beta T cell | 5.95e-29 | 18 |
T cell | 1.86e-24 | 25 |
pro-T cell | 1.86e-24 | 25 |
CD4-positive, alpha-beta T cell | 1.68e-23 | 6 |
lymphoid lineage restricted progenitor cell | 3.90e-15 | 52 |
lymphocyte | 8.46e-15 | 53 |
common lymphoid progenitor | 8.46e-15 | 53 |
regulatory T cell | 2.27e-12 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.27e-12 | 2 |
naive regulatory T cell | 2.27e-12 | 2 |
CD8-positive, alpha-beta T cell | 3.40e-12 | 11 |
naive T cell | 1.58e-08 | 3 |
natural killer cell | 2.84e-08 | 3 |
pro-NK cell | 2.84e-08 | 3 |
nongranular leukocyte | 1.95e-07 | 115 |
leukocyte | 8.63e-07 | 136 |