FFCP PHASE1:Hg19::chr5:110574533..110574537,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:110574533..110574537,+ | |||
|coexpression_cluster_id=C1473 | |||
|description=CAGE_peak_at_chr5:110574533..110574537,+ | |||
|id=chr5:110574533..110574537,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.78e-18!53;CL:0000051!1.78e-18!53;CL:0000084!3.44e-18!25;CL:0000827!3.44e-18!25;CL:0000838!6.29e-18!52;CL:0000791!2.66e-16!18;CL:0000789!2.66e-16!18;CL:0002420!2.66e-16!18;CL:0002419!2.66e-16!18;CL:0000790!2.66e-16!18;CL:0000625!9.58e-11!11;CL:0000738!1.53e-08!140;CL:0002087!2.38e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.65e-23;18!CL:0000789;1.65e-23;18!CL:0002419;1.65e-23;18!CL:0000084;2.45e-18;25!CL:0000625;2.85e-16;11!CL:0000624;1.70e-10;6!CL:0000226;6.18e-08;3!CL:0000842;6.18e-08;3!CL:0000623;9.54e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.32e-23,18;CL:0000789,2.32e-23,18;CL:0002420,2.32e-23,18;CL:0002419,2.32e-23,18;CL:0000790,2.32e-23,18;CL:0000084,3.37e-18,25;CL:0000827,3.37e-18,25;CL:0000625,3.83e-16,11;CL:0000838,1.98e-11,52;CL:0000542,4.05e-11,53;CL:0000051,4.05e-11,53;CL:0000624,1.81e-10,6;CL:0000226,5.72e-08,3;CL:0000842,5.72e-08,3;CL:0000623,9.25e-08,3;CL:0000825,9.25e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.65e-23;18!UBERON:0006215;1.59e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.16e-17!115;UBERON:0002780!2.14e-16!41;UBERON:0001890!2.14e-16!41;UBERON:0006240!2.14e-16!41;UBERON:0001869!6.98e-16!32;UBERON:0001049!7.28e-16!57;UBERON:0005068!7.28e-16!57;UBERON:0006241!7.28e-16!57;UBERON:0007135!7.28e-16!57;UBERON:0003080!1.03e-15!42;UBERON:0001893!3.32e-15!34;UBERON:0002791!1.15e-14!33;UBERON:0002619!1.89e-14!22;UBERON:0002020!5.11e-14!34;UBERON:0003528!5.11e-14!34;UBERON:0002616!8.09e-14!59;UBERON:0001017!1.81e-13!82;UBERON:0000955!2.99e-13!69;UBERON:0006238!2.99e-13!69;UBERON:0001950!3.43e-13!20;UBERON:0000956!8.23e-13!25;UBERON:0000203!8.23e-13!25;UBERON:0000073!1.54e-12!94;UBERON:0001016!1.54e-12!94;UBERON:0005743!4.40e-12!86;UBERON:0003056!1.10e-10!61;UBERON:0003075!2.46e-10!86;UBERON:0007284!2.46e-10!86;UBERON:0000178!9.14e-10!15;UBERON:0000179!9.14e-10!15;UBERON:0000463!9.14e-10!15;UBERON:0002346!1.09e-09!90;UBERON:0000153!1.38e-07!129;UBERON:0007811!1.38e-07!129;UBERON:0001871!6.91e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.11e-10;22!UBERON:0001950;4.75e-10;20!UBERON:0000956;3.89e-09;25!UBERON:0000203;3.89e-09;25!UBERON:0002791;7.98e-09;32!UBERON:0001869;8.52e-09;32!UBERON:0000178;4.62e-08;15!UBERON:0000179;4.62e-08;15!UBERON:0000463;4.62e-08;15!UBERON:0003528;6.02e-08;34!UBERON:0002020;6.02e-08;34!UBERON:0001893;8.80e-08;34!UBERON:0000073;2.32e-07;53!UBERON:0002616;2.32e-07;53!UBERON:0002780;2.41e-07;41!UBERON:0001890;2.41e-07;41!UBERON:0001871;2.45e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.62e-11,53;UBERON:0002616,5.62e-11,53;UBERON:0002619,8.43e-11,22;UBERON:0001950,3.79e-10,20;UBERON:0001049,3.93e-10,56;UBERON:0005068,3.93e-10,56;UBERON:0006241,3.93e-10,56;UBERON:0007135,3.93e-10,56;UBERON:0002791,1.31e-09,32;UBERON:0001869,1.31e-09,32;UBERON:0000955,2.68e-09,68;UBERON:0006238,2.68e-09,68;UBERON:0000956,3.06e-09,25;UBERON:0000203,3.06e-09,25;UBERON:0002780,4.29e-09,41;UBERON:0001890,4.29e-09,41;UBERON:0003080,4.29e-09,41;UBERON:0006240,4.29e-09,41;UBERON:0001016,5.29e-09,89;UBERON:0003528,7.15e-09,34;UBERON:0002020,7.15e-09,34;UBERON:0001893,7.15e-09,34;UBERON:0007023,1.04e-08,114;UBERON:0000178,3.96e-08,15;UBERON:0000179,3.96e-08,15;UBERON:0000463,3.96e-08,15;UBERON:0001871,1.78e-07,6;UBERON:0001017,5.08e-07,81 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,1.14620108621927,0.903106483949403,0.787107813136792,0.786728553697808,0.383829398097213,0,0,0,0,0,0,0,0.553995408531877,2.4065333696417,2.82114131930607,0,1.6194683300949,0,0.145398238779565,0,0.242584061187816,0,0.411167888021826,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0,0,2.42159801053347,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0.587237189370939,0.382273228125229,0,1.12101712596307,0,10.0321982758055,16.5064520354649,9.04646595597841,2.00623794468814,6.8443675993054,6.62826928028627,3.89653456815823,1.6711568532776,2.3568472597987,5.53834736459053,4.87446954777028,2.5618263945135,2.34106825607781,8.55077103939116,3.86890024900188,4.63684937176084,5.33831627383417,10.7016331235885,10.4535523804977,1.58633079776593,0.383220493601921,1.37450978193052,2.02415753615602,2.22995790026868,3.25541726928209,0.950452044448374,3.312652619711,4.60751800155906,3.74792179657038,4.49876778883632,0.821127996921047,5.24177532384304,5.08136371988664,11.8756011183895,0,0,0,0,0,0,0,0,0.283604451492204,0.443458794925128,0.790513071238134,0.261958150995425,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0.183201743930407,1.31780417436063,0,0,0,0.12663051166458,0,0,0,0,0,0,0.933633106199299,0,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0.161872944368132,0.702254033511242,0,0.122834317311768,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,5.73902029239046,0,0,0,0,0.100528972411631,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0.383382679165211,0.492663237895943,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0.672510863961164,2.56139988262505,3.45004119775228,6.41715181398742,0.508189248444927,0,0,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.37596867919507,4.74571241800957,3.62873696531711,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.309123034943167,0,0.165018999841176,0,0,0,0.096670718292122,0.462145851343933,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0.507447609232169,0.764637207142375,1.70894156152249,2.1440859791201,1.64544909234478,1.29694662238543,2.70015718619057,0.79312517629427,0,0,0,0.743212700502875,0,4.0550850708596,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0.557216921387392,0,0,0,0,1.9882952955326,1.96937182974718,0.111308705022906,0.329607748453519,0.211125408127993,0.398495976502139,2.21027132424918,0,0,0.738508832766417,0,0,0,0,0.0986434056369336,0,0,2.90799823828566,0.185536196323703,1.99613798001194,0,0,0,0.1137934482855,0,0.236387681767936,0.344743373241465,0.583209226766509,0.694499979733169,0.885741385813839,4.5826646677655,7.62908681585416,12.3848771122972,6.50204761697804,0.438770794307945,0,0.278847488557207,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,2.4441205797345,0.593042257361244,0.494255755786011,0.313265848516366,0.067401132980677,0,0.468528891450678,0.547364367646998,0,0,0,4.83962864194656,2.44858209304392,0.063186579628488,0.450970258243478,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0.19871461170299,0.823040347426423,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0.547621515567972,0,0,0.525774708558629,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,1.59045937961861,0.681017030557878,0,0.137539436597234,0,0.2249738915515,0,0.607495566580247,0,0.0788057072991982,0.157363764404994,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0.943225830597996,2.48543433208317,1.48849806543585,0.790446527591777,0.121792598380896,0.638341257770182,0,0,0,0,0.314108192500469,3.54427271986794,0.610131324509816,0.625954653532499,0,1.55300672151593,0.18628920882415,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0.147855149989634,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0.428883182749851,0,0,0.231522474323834,0,0.179088841081487,0,0,0.176689145945881,0,0.168942440653073,0,0,0,1.10606748921385,0.194860308839388,0,0,0,0,0,0.999936979274649,0,0.861074898304078,0,0.184105950251841,0,0,1.15104934173287,1.50954735955355,0,4.14996625129653,0,0,0.123935764259002,0,0,1.10406443001755,0,0,0,0.899209151350433,0,1.27707087245721,2.46139637088906,0.756215088665154,0.207471757392654,0.484426936895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| |||
|short_description=p@chr5:110574533..110574537,+ | |||
}} |
Latest revision as of 08:41, 30 July 2015
Short description: | p@chr5:110574533..110574537, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:110574533..110574537, + |
Coexpression cluster: | C1473_CD4_cerebellum_thymus_neuroblastoma_CD8_Peripheral_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.32e-23 | 18 |
alpha-beta T cell | 2.32e-23 | 18 |
immature T cell | 2.32e-23 | 18 |
mature T cell | 2.32e-23 | 18 |
immature alpha-beta T cell | 2.32e-23 | 18 |
T cell | 3.37e-18 | 25 |
pro-T cell | 3.37e-18 | 25 |
CD8-positive, alpha-beta T cell | 3.83e-16 | 11 |
lymphoid lineage restricted progenitor cell | 1.98e-11 | 52 |
lymphocyte | 4.05e-11 | 53 |
common lymphoid progenitor | 4.05e-11 | 53 |
CD4-positive, alpha-beta T cell | 1.81e-10 | 6 |
single nucleate cell | 5.72e-08 | 3 |
mononuclear cell | 5.72e-08 | 3 |
natural killer cell | 9.25e-08 | 3 |
pro-NK cell | 9.25e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 5.62e-11 | 53 |
regional part of brain | 5.62e-11 | 53 |
regional part of cerebral cortex | 8.43e-11 | 22 |
neocortex | 3.79e-10 | 20 |
neural tube | 3.93e-10 | 56 |
neural rod | 3.93e-10 | 56 |
future spinal cord | 3.93e-10 | 56 |
neural keel | 3.93e-10 | 56 |
regional part of telencephalon | 1.31e-09 | 32 |
cerebral hemisphere | 1.31e-09 | 32 |
brain | 2.68e-09 | 68 |
future brain | 2.68e-09 | 68 |
cerebral cortex | 3.06e-09 | 25 |
pallium | 3.06e-09 | 25 |
regional part of forebrain | 4.29e-09 | 41 |
forebrain | 4.29e-09 | 41 |
anterior neural tube | 4.29e-09 | 41 |
future forebrain | 4.29e-09 | 41 |
nervous system | 5.29e-09 | 89 |
brain grey matter | 7.15e-09 | 34 |
gray matter | 7.15e-09 | 34 |
telencephalon | 7.15e-09 | 34 |
adult organism | 1.04e-08 | 114 |
blood | 3.96e-08 | 15 |
haemolymphatic fluid | 3.96e-08 | 15 |
organism substance | 3.96e-08 | 15 |
temporal lobe | 1.78e-07 | 6 |
central nervous system | 5.08e-07 | 81 |