FFCP PHASE1:Hg19::chr5:1049320..1049333,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:1049320..1049333,+ | |||
|coexpression_cluster_id=C42 | |coexpression_cluster_id=C42 | ||
|description=CAGE_peak_at_chr5:1049320..1049333,+ | |description=CAGE_peak_at_chr5:1049320..1049333,+ | ||
|id=chr5:1049320..1049333,+ | |id=chr5:1049320..1049333,+ | ||
|ontology_enrichment_celltype=CL:0000167!5.79e-08!1;CL:0000164!5.79e-08!1;CL:0000502!5.79e-08!1;CL:0000172!5.79e-08!1;CL:0000173!5.79e-08!1;CL:0002351!5.79e-08!1 | |ontology_enrichment_celltype=CL:0000167!5.79e-08!1;CL:0000164!5.79e-08!1;CL:0000502!5.79e-08!1;CL:0000172!5.79e-08!1;CL:0000173!5.79e-08!1;CL:0002351!5.79e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:1000487;7.05e-34;2!CL:0000214;3.27e-23;3!CL:0000153;1.12e-08;9!CL:0000447;1.12e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:1000487,7.05e-34,2;CL:0000214,3.27e-23,3;CL:0000153,1.12e-08,9;CL:0000447,1.12e-08,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4430!5.79e-08!1;DOID:5409!9.32e-08!4 | |ontology_enrichment_disease=DOID:4430!5.79e-08!1;DOID:5409!9.32e-08!4 | ||
|ontology_enrichment_disease_v019=DOID:5409;7.35e-18;4!DOID:1325;8.16e-11;7!DOID:3904;8.16e-11;7!DOID:3905;1.04e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,7.35e-18,4;DOID:1325,8.16e-11,7;DOID:3904,8.16e-11,7;DOID:3905,1.04e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0001871!2.64e-13!7;UBERON:0002771!1.52e-09!3;UBERON:0002619!5.44e-07!22 | |ontology_enrichment_uberon=UBERON:0001871!2.64e-13!7;UBERON:0002771!1.52e-09!3;UBERON:0002619!5.44e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0006915;3.27e-23;3!UBERON:0007616;3.27e-23;3!UBERON:0002217;3.27e-23;3!UBERON:0002018;3.27e-23;3!UBERON:0004905;1.35e-09;8!UBERON:0000982;1.35e-09;8!UBERON:0004770;1.35e-09;8!UBERON:0004457;1.12e-08;9!UBERON:0000042;1.12e-08;9!UBERON:0002367;2.63e-07;11!UBERON:0010147;2.63e-07;11!UBERON:0000486;7.92e-07;12!UBERON:0003937;8.38e-07;12!UBERON:0005399;8.38e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,3.27e-23,3;UBERON:0007616,3.27e-23,3;UBERON:0002217,3.27e-23,3;UBERON:0002018,3.27e-23,3;UBERON:0004905,1.35e-09,8;UBERON:0000982,1.35e-09,8;UBERON:0004770,1.35e-09,8;UBERON:0005153,2.92e-08,37;UBERON:0002367,2.63e-07,11;UBERON:0010147,2.63e-07,11;UBERON:0009846,2.63e-07,11;UBERON:0003353,2.63e-07,11;UBERON:0004902,2.63e-07,11;UBERON:0003820,2.63e-07,11;UBERON:0009847,2.63e-07,11;UBERON:0004457,7.92e-07,12;UBERON:0000042,7.92e-07,12;UBERON:0003937,8.38e-07,12;UBERON:0005399,8.38e-07,12;UBERON:0005157,1.00e-06,47 | |||
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|short_description=p@chr5:1049320..1049333,+ | |short_description=p@chr5:1049320..1049333,+ | ||
}} | }} |
Latest revision as of 08:27, 30 July 2015
Short description: | p@chr5:1049320..1049333, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:1049320..1049333, + |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of prostate | 7.05e-34 | 2 |
synovial cell | 3.27e-23 | 3 |
GAG secreting cell | 1.12e-08 | 9 |
carbohydrate secreting cell | 1.12e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 3.27e-23 | 3 |
layer of synovial tissue | 3.27e-23 | 3 |
synovial joint | 3.27e-23 | 3 |
synovial membrane of synovial joint | 3.27e-23 | 3 |
articulation | 1.35e-09 | 8 |
skeletal joint | 1.35e-09 | 8 |
articular system | 1.35e-09 | 8 |
epithelial bud | 2.92e-08 | 37 |
prostate gland | 2.63e-07 | 11 |
male accessory sex gland | 2.63e-07 | 11 |
embryonic cloacal epithelium | 2.63e-07 | 11 |
epithelium of hindgut | 2.63e-07 | 11 |
urogenital sinus epithelium | 2.63e-07 | 11 |
prostate bud | 2.63e-07 | 11 |
prostate field | 2.63e-07 | 11 |
cavity lining | 7.92e-07 | 12 |
serous membrane | 7.92e-07 | 12 |
sex gland | 8.38e-07 | 12 |
male reproductive gland | 8.38e-07 | 12 |
epithelial fold | 1.00e-06 | 47 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 7.35e-18 | 4 |
bronchus cancer | 8.16e-11 | 7 |
bronchogenic carcinoma | 8.16e-11 | 7 |
lung carcinoma | 1.04e-08 | 9 |