FFCP PHASE1:Hg19::chr5:1044530..1044539,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:1044530..1044539,+ | |||
|description=CAGE_peak_at_chr5:1044530..1044539,+ | |description=CAGE_peak_at_chr5:1044530..1044539,+ | ||
|id=chr5:1044530..1044539,+ | |id=chr5:1044530..1044539,+ | ||
|ontology_enrichment_celltype=CL:0002557!3.62e-07!1 | |ontology_enrichment_celltype=CL:0002557!3.62e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:1000487;5.04e-34;2!CL:0000746;3.27e-23;3!CL:0000214;3.27e-23;3!CL:0000737;8.69e-18;4!CL:0000153;1.12e-08;9!CL:0000447;1.12e-08;9 | |ontology_enrichment_celltype_v019=CL:1000487;5.04e-34;2!CL:0000746;3.27e-23;3!CL:0000214;3.27e-23;3!CL:0000737;8.69e-18;4!CL:0000153;1.12e-08;9!CL:0000447;1.12e-08;9 | ||
|ontology_enrichment_celltype_v019_2=CL:1000487,3.61e-34,2;CL:0000746,3.27e-23,3;CL:0000513,3.27e-23,3;CL:0000214,4.09e-23,3;CL:0000737,8.69e-18,4;CL:0000153,1.21e-08,9;CL:0000447,1.21e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000513;3.27e-23;3 | |ontology_enrichment_development_v019=CL:0000513;3.27e-23;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr5:1044530..1044539,+ | |short_description=p@chr5:1044530..1044539,+ | ||
}} | }} |
Latest revision as of 08:27, 30 July 2015
Short description: | p@chr5:1044530..1044539, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:1044530..1044539, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of prostate | 3.61e-34 | 2 |
cardiac muscle cell | 3.27e-23 | 3 |
cardiac muscle myoblast | 3.27e-23 | 3 |
synovial cell | 4.09e-23 | 3 |
striated muscle cell | 8.69e-18 | 4 |
GAG secreting cell | 1.21e-08 | 9 |
carbohydrate secreting cell | 1.21e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 4.09e-23 | 3 |
layer of synovial tissue | 4.09e-23 | 3 |
synovial joint | 4.09e-23 | 3 |
synovial membrane of synovial joint | 4.09e-23 | 3 |
articulation | 1.47e-09 | 8 |
skeletal joint | 1.47e-09 | 8 |
articular system | 1.47e-09 | 8 |
multilaminar epithelium | 3.31e-08 | 83 |
prostate gland | 2.32e-07 | 11 |
male accessory sex gland | 2.32e-07 | 11 |
embryonic cloacal epithelium | 2.32e-07 | 11 |
epithelium of hindgut | 2.32e-07 | 11 |
urogenital sinus epithelium | 2.32e-07 | 11 |
prostate bud | 2.32e-07 | 11 |
prostate field | 2.32e-07 | 11 |
sex gland | 7.48e-07 | 12 |
male reproductive gland | 7.48e-07 | 12 |
cavity lining | 8.38e-07 | 12 |
serous membrane | 8.38e-07 | 12 |