FFCP PHASE1:Hg19::chr4:99942777..99942781,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:99942777..99942781,- | |||
|coexpression_cluster_id=C83 | |coexpression_cluster_id=C83 | ||
|description=CAGE_peak_at_chr4:99942777..99942781,- | |description=CAGE_peak_at_chr4:99942777..99942781,- | ||
|id=chr4:99942777..99942781,- | |id=chr4:99942777..99942781,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002262;1.21e-13;2!CL:1000398;1.21e-13;2!CL:0000322;1.19e-09;3!CL:0002590;1.53e-09;3!CL:0002594;1.80e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,1.07e-13,2;CL:1000398,1.07e-13,2;CL:0000322,1.19e-09,3;CL:0002590,1.54e-09,3;CL:0002594,2.04e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!6.43e-09!27 | |ontology_enrichment_uberon=UBERON:0007100!6.43e-09!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0001281;1.21e-13;2!UBERON:0003497;1.21e-13;2!UBERON:0003909;1.21e-13;2!UBERON:0003835;1.21e-13;2!UBERON:0004821;1.19e-09;3!UBERON:0007499;1.19e-09;3!UBERON:0003215;1.19e-09;3!UBERON:0010368;1.19e-09;3!UBERON:0009911;1.19e-09;3!UBERON:0002299;1.19e-09;3!UBERON:0006524;1.19e-09;3!UBERON:0008874;1.19e-09;3!UBERON:0002169;1.19e-09;3!UBERON:0004894;1.19e-09;3!UBERON:0001280;1.53e-09;3!UBERON:0004647;1.53e-09;3!UBERON:0009856;1.49e-07;4!UBERON:0001310;1.80e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,1.07e-13,2;UBERON:0003497,1.07e-13,2;UBERON:0003909,1.07e-13,2;UBERON:0003835,1.07e-13,2;UBERON:0004821,1.19e-09,3;UBERON:0003215,1.19e-09,3;UBERON:0010368,1.19e-09,3;UBERON:0009911,1.19e-09,3;UBERON:0002299,1.19e-09,3;UBERON:0006524,1.19e-09,3;UBERON:0008874,1.19e-09,3;UBERON:0002169,1.19e-09,3;UBERON:0004894,1.19e-09,3;UBERON:0001280,1.41e-09,3;UBERON:0004647,1.41e-09,3;UBERON:0005171,1.41e-09,3;UBERON:0001310,2.04e-07,4 | |||
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| ||
|short_description=p@chr4:99942777..99942781,- | |short_description=p@chr4:99942777..99942781,- | ||
}} | }} |
Latest revision as of 08:17, 30 July 2015
Short description: | p@chr4:99942777..99942781, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:99942777..99942781, - |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 1.07e-13 | 2 |
endothelial cell of hepatic sinusoid | 1.07e-13 | 2 |
pneumocyte | 1.19e-09 | 3 |
smooth muscle cell of the brain vasculature | 1.54e-09 | 3 |
smooth muscle cell of the umbilical artery | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 1.07e-13 | 2 |
abdomen blood vessel | 1.07e-13 | 2 |
sinusoid | 1.07e-13 | 2 |
abdominal segment blood vessel | 1.07e-13 | 2 |
pulmonary alveolus epithelium | 1.19e-09 | 3 |
alveolus | 1.19e-09 | 3 |
pulmonary lobule | 1.19e-09 | 3 |
lobule | 1.19e-09 | 3 |
alveolus of lung | 1.19e-09 | 3 |
alveolar system | 1.19e-09 | 3 |
pulmonary acinus | 1.19e-09 | 3 |
alveolar sac | 1.19e-09 | 3 |
alveolar wall | 1.19e-09 | 3 |
liver parenchyma | 1.41e-09 | 3 |
liver lobule | 1.41e-09 | 3 |
hepatic duct | 1.41e-09 | 3 |
umbilical artery | 2.04e-07 | 4 |