FFCP PHASE1:Hg19::chr4:93623091..93623118,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:93623091..93623118,+ | |||
|coexpression_cluster_id=C434 | |||
|description=CAGE_peak_at_chr4:93623091..93623118,+ | |description=CAGE_peak_at_chr4:93623091..93623118,+ | ||
|id=chr4:93623091..93623118,+ | |id=chr4:93623091..93623118,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.54e-09;33!CL:0002057;6.54e-09;33!CL:0000473;2.53e-07;39!CL:0000234;2.53e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.94e-07,48;CL:0000234,1.94e-07,48;CL:0000860,2.34e-07,42;CL:0002057,2.34e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.62e-18!115;UBERON:0001049!1.92e-09!57;UBERON:0005068!1.92e-09!57;UBERON:0006241!1.92e-09!57;UBERON:0007135!1.92e-09!57;UBERON:0003080!3.10e-08!42;UBERON:0002616!6.67e-08!59;UBERON:0002780!6.89e-08!41;UBERON:0001890!6.89e-08!41;UBERON:0006240!6.89e-08!41;UBERON:0002020!4.76e-07!34;UBERON:0003528!4.76e-07!34 | |ontology_enrichment_uberon=UBERON:0007023!1.62e-18!115;UBERON:0001049!1.92e-09!57;UBERON:0005068!1.92e-09!57;UBERON:0006241!1.92e-09!57;UBERON:0007135!1.92e-09!57;UBERON:0003080!3.10e-08!42;UBERON:0002616!6.67e-08!59;UBERON:0002780!6.89e-08!41;UBERON:0001890!6.89e-08!41;UBERON:0006240!6.89e-08!41;UBERON:0002020!4.76e-07!34;UBERON:0003528!4.76e-07!34 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.47e-17,114;UBERON:0010371,1.47e-08,104;UBERON:0001049,2.56e-08,56;UBERON:0005068,2.56e-08,56;UBERON:0006241,2.56e-08,56;UBERON:0007135,2.56e-08,56;UBERON:0000073,5.47e-08,53;UBERON:0002616,5.47e-08,53;UBERON:0002780,1.72e-07,41;UBERON:0001890,1.72e-07,41;UBERON:0003080,1.72e-07,41;UBERON:0006240,1.72e-07,41;UBERON:0002346,4.42e-07,86;UBERON:0003075,7.43e-07,82;UBERON:0007284,7.43e-07,82;UBERON:0003528,9.47e-07,34;UBERON:0002020,9.47e-07,34 | |||
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| ||
|short_description=p@chr4:93623091..93623118,+ | |short_description=p@chr4:93623091..93623118,+ | ||
}} | }} |
Latest revision as of 08:05, 30 July 2015
Short description: | p@chr4:93623091..93623118, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:93623091..93623118, + |
Coexpression cluster: | C434_heart_left_Monocytederived_acute_skeletal_penis_seminal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.94e-07 | 48 |
phagocyte | 1.94e-07 | 48 |
classical monocyte | 2.34e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.34e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.47e-17 | 114 |
ecto-epithelium | 1.47e-08 | 104 |
neural tube | 2.56e-08 | 56 |
neural rod | 2.56e-08 | 56 |
future spinal cord | 2.56e-08 | 56 |
neural keel | 2.56e-08 | 56 |
regional part of nervous system | 5.47e-08 | 53 |
regional part of brain | 5.47e-08 | 53 |
regional part of forebrain | 1.72e-07 | 41 |
forebrain | 1.72e-07 | 41 |
anterior neural tube | 1.72e-07 | 41 |
future forebrain | 1.72e-07 | 41 |
neurectoderm | 4.42e-07 | 86 |
neural plate | 7.43e-07 | 82 |
presumptive neural plate | 7.43e-07 | 82 |
brain grey matter | 9.47e-07 | 34 |
gray matter | 9.47e-07 | 34 |