FFCP PHASE1:Hg19::chr4:88902876..88902895,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:88902876..88902895,+ | |||
|coexpression_cluster_id=C455 | |||
|description=CAGE_peak_at_chr4:88902876..88902895,+ | |||
|id=chr4:88902876..88902895,+ | |||
|ontology_enrichment_celltype=CL:0000235!4.09e-09!10 | |||
|ontology_enrichment_celltype_v019=CL:0000235;2.10e-60;6!CL:0000319;3.81e-11;1!CL:0000473;6.79e-08;39!CL:0000234;6.79e-08;39!CL:0002149;1.86e-07;6!CL:0002255;1.86e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.72e-60,6;CL:0000319,4.01e-11,1;CL:0002149,1.47e-07,6;CL:0002255,1.47e-07,6;CL:0000473,3.29e-07,48;CL:0000234,3.29e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;7.40e-21;2!DOID:3030;3.81e-11;1!DOID:3001;1.86e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,5.20e-21,2;DOID:3030,4.01e-11,1;DOID:3001,1.47e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.04e-20!57;UBERON:0005068!9.04e-20!57;UBERON:0006241!9.04e-20!57;UBERON:0007135!9.04e-20!57;UBERON:0003075!4.58e-19!86;UBERON:0007284!4.58e-19!86;UBERON:0002346!7.91e-18!90;UBERON:0005743!3.50e-16!86;UBERON:0001017!4.05e-16!82;UBERON:0007023!1.19e-15!115;UBERON:0002616!1.53e-15!59;UBERON:0000073!5.26e-15!94;UBERON:0001016!5.26e-15!94;UBERON:0002020!6.24e-15!34;UBERON:0003528!6.24e-15!34;UBERON:0000955!2.08e-13!69;UBERON:0006238!2.08e-13!69;UBERON:0003056!7.64e-12!61;UBERON:0002791!9.38e-12!33;UBERON:0002780!1.00e-11!41;UBERON:0001890!1.00e-11!41;UBERON:0006240!1.00e-11!41;UBERON:0003080!2.37e-11!42;UBERON:0001893!2.61e-11!34;UBERON:0003076!1.12e-10!15;UBERON:0003057!1.12e-10!15;UBERON:0001869!2.21e-10!32;UBERON:0002298!4.39e-10!8;UBERON:0002308!2.33e-09!9;UBERON:0000125!2.33e-09!9;UBERON:0004121!1.03e-08!169;UBERON:0000924!2.58e-08!173;UBERON:0006601!2.58e-08!173;UBERON:0000956!3.01e-08!25;UBERON:0000203!3.01e-08!25;UBERON:0004733!3.20e-08!12;UBERON:0002028!3.20e-08!12;UBERON:0007277!3.20e-08!12;UBERON:0000033!3.36e-08!123;UBERON:0000153!3.66e-08!129;UBERON:0007811!3.66e-08!129;UBERON:0006331!5.08e-08!3;UBERON:0002619!5.34e-08!22;UBERON:0004732!1.66e-07!13;UBERON:0000988!2.26e-07!3;UBERON:0001950!3.47e-07!20;UBERON:0001871!8.76e-07!7;UBERON:0000062!8.83e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;1.78e-11;1!UBERON:0009661;1.78e-11;1!UBERON:0002950;1.78e-11;1!UBERON:0001891;1.78e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.78e-11,1;UBERON:0009661,1.78e-11,1;UBERON:0002950,1.78e-11,1;UBERON:0001891,1.78e-11,1;UBERON:0009616,1.78e-11,1;UBERON:0010286,1.78e-11,1 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.196468613246569,0,0,0.649094787309367,0.348259474598534,0.797747763113191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,2.21595305478658,4.68008530278475,4.01304138179566,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34434894420094,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,3.01354254859276,6.32501818449095,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.422206515571503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0.716084698702437,0,0.197286811273867,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,1.26598838716816,2.61172493054636,0,0,0,0,0,0,0,0,0,0,0.937057782901357,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,1.99226682220855,1.38674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,1.23214841002794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0.544813624446302,0,0,0,0,0,0,0,5.83162234014067,0.104909176269996,0,2.15144807199414,0,0,0,0,1.08599920350743,0,0,0,0,0,0,0,0,0.387848869084652,0.52893040697076,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.887432412294818,0.248385611765534,0,0,0.606596470166591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0,0.829550616910385,0,0,0,0,1.2288645437686,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638535436228605,1.02558182120378,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0.620060389503552,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0.135939465953663,0.197318320688547,0,0,0,0,0,0,0.431855182437243,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57046773691956,0.297046400327086,0,0,0,0,0,0,0,0,0,0,2.29343333042322,0,0.271965960763659,0.436350690340377,0,0,0,0,0.883164973845552,0,0,0,0,0,0,0.0757786982182394,0,0,0.310298987585686,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:88902876..88902895,+ | |||
}} |
Latest revision as of 07:53, 30 July 2015
Short description: | p@chr4:88902876..88902895, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:88902876..88902895, + |
Coexpression cluster: | C455_kidney_Macrophage_clear_endometrial_Monocytederived_large_spinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.72e-60 | 6 |
mucus secreting cell | 4.01e-11 | 1 |
epithelial cell of uterus | 1.47e-07 | 6 |
stromal cell of endometrium | 1.47e-07 | 6 |
defensive cell | 3.29e-07 | 48 |
phagocyte | 3.29e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 1.78e-11 | 1 |
midbrain nucleus | 1.78e-11 | 1 |
regional part of midbrain | 1.78e-11 | 1 |
midbrain | 1.78e-11 | 1 |
presumptive midbrain | 1.78e-11 | 1 |
midbrain neural tube | 1.78e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 5.20e-21 | 2 |
mucinous adenocarcinoma | 4.01e-11 | 1 |
female reproductive endometrioid cancer | 1.47e-07 | 6 |