FFCP PHASE1:Hg19::chr4:88902759..88902776,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:88902759..88902776,+ | |||
|coexpression_cluster_id=C455 | |||
|description=CAGE_peak_at_chr4:88902759..88902776,+ | |description=CAGE_peak_at_chr4:88902759..88902776,+ | ||
|id=chr4:88902759..88902776,+ | |id=chr4:88902759..88902776,+ | ||
|ontology_enrichment_celltype=CL:0000235!3.41e-07!10 | |ontology_enrichment_celltype=CL:0000235!3.41e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000235;2.04e-44;6!CL:0000319;9.48e-18;1!CL:0000159;1.51e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.82e-44,6;CL:0000319,7.37e-18,1;CL:0000159,1.33e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;4.08e-18;1!UBERON:0003056;6.69e-07;3 | |||
|ontology_enrichment_disease=DOID:4468!7.45e-07!2 | |ontology_enrichment_disease=DOID:4468!7.45e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:3030;9.48e-18;1!DOID:4468;1.51e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,7.37e-18,1;DOID:4468,1.22e-09,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000941;4.08e-18;1!UBERON:0001785;4.08e-18;1!UBERON:0002464;4.08e-18;1!UBERON:0004904;4.08e-18;1!UBERON:0001021;4.08e-18;1!UBERON:0002038;9.48e-18;1!UBERON:0009661;9.48e-18;1!UBERON:0002950;9.48e-18;1!UBERON:0001891;9.48e-18;1!UBERON:0003714;9.87e-10;2!UBERON:0005162;9.87e-10;2!UBERON:0000122;9.87e-10;2!UBERON:0002148;1.51e-09;2!UBERON:0006331;1.51e-09;2!UBERON:0009662;1.51e-09;2!UBERON:0000125;2.96e-08;9!UBERON:0002308;2.96e-08;9!UBERON:0000988;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.75e-18,1;UBERON:0001785,3.75e-18,1;UBERON:0002464,3.75e-18,1;UBERON:0004904,3.75e-18,1;UBERON:0001021,3.75e-18,1;UBERON:0003902,3.75e-18,1;UBERON:0005425,3.75e-18,1;UBERON:0002038,1.70e-17,1;UBERON:0009661,1.70e-17,1;UBERON:0002950,1.70e-17,1;UBERON:0001891,1.70e-17,1;UBERON:0009616,1.70e-17,1;UBERON:0010286,1.70e-17,1;UBERON:0003714,9.46e-10,2;UBERON:0005162,9.46e-10,2;UBERON:0000122,9.46e-10,2;UBERON:0002148,1.71e-09,2;UBERON:0006331,1.71e-09,2;UBERON:0009662,1.71e-09,2;UBERON:0000125,3.55e-08,9;UBERON:0002308,3.55e-08,9;UBERON:0000988,9.64e-07,3 | |||
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| ||
|short_description=p@chr4:88902759..88902776,+ | |short_description=p@chr4:88902759..88902776,+ | ||
}} | }} |
Latest revision as of 07:52, 30 July 2015
Short description: | p@chr4:88902759..88902776, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:88902759..88902776, + |
Coexpression cluster: | C455_kidney_Macrophage_clear_endometrial_Monocytederived_large_spinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.82e-44 | 6 |
mucus secreting cell | 7.37e-18 | 1 |
seromucus secreting cell | 1.33e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.75e-18 | 1 |
cranial nerve | 3.75e-18 | 1 |
nerve trunk | 3.75e-18 | 1 |
nerve connecting eye with brain | 3.75e-18 | 1 |
nerve | 3.75e-18 | 1 |
retinal neural layer | 3.75e-18 | 1 |
presumptive neural retina | 3.75e-18 | 1 |
substantia nigra | 1.70e-17 | 1 |
midbrain nucleus | 1.70e-17 | 1 |
regional part of midbrain | 1.70e-17 | 1 |
midbrain | 1.70e-17 | 1 |
presumptive midbrain | 1.70e-17 | 1 |
midbrain neural tube | 1.70e-17 | 1 |
neural tissue | 9.46e-10 | 2 |
multi cell component structure | 9.46e-10 | 2 |
neuron projection bundle | 9.46e-10 | 2 |
locus ceruleus | 1.71e-09 | 2 |
brainstem nucleus | 1.71e-09 | 2 |
hindbrain nucleus | 1.71e-09 | 2 |
neural nucleus | 3.55e-08 | 9 |
nucleus of brain | 3.55e-08 | 9 |
pons | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 7.37e-18 | 1 |
clear cell adenocarcinoma | 1.22e-09 | 2 |