FFCP PHASE1:Hg19::chr4:78741549..78741569,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:78741549..78741569,+
|short_description=p@chr4:78741549..78741569,+
|description=CAGE_peak_at_chr4:78741549..78741569,+
|association_with_transcript=NA
|E...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:78741549..78741569,+ | |||
|coexpression_cluster_id=C2148 | |||
|description=CAGE_peak_at_chr4:78741549..78741569,+ | |||
|id=chr4:78741549..78741569,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.76e-42!140;CL:0000037!1.75e-36!172;CL:0000566!1.75e-36!172;CL:0000988!5.81e-35!182;CL:0002032!1.17e-32!165;CL:0000837!1.17e-32!165;CL:0002031!1.43e-32!124;CL:0002087!6.02e-30!119;CL:0000838!3.53e-23!52;CL:0000542!1.99e-22!53;CL:0000051!1.99e-22!53;CL:0000791!1.40e-16!18;CL:0000789!1.40e-16!18;CL:0002420!1.40e-16!18;CL:0002419!1.40e-16!18;CL:0000790!1.40e-16!18;CL:0000084!1.45e-14!25;CL:0000827!1.45e-14!25;CL:0000766!2.03e-14!76;CL:0000763!1.47e-12!112;CL:0000049!1.47e-12!112;CL:0002057!6.69e-12!42;CL:0000860!3.74e-11!45;CL:0000236!6.25e-11!14;CL:0000625!1.14e-10!11;CL:0000839!3.19e-10!70;CL:0002393!3.54e-10!9;CL:0002397!3.54e-10!9;CL:0000557!4.33e-10!71;CL:0000094!1.86e-09!8;CL:0002009!4.55e-09!65;CL:0002194!4.47e-08!63;CL:0000576!4.47e-08!63;CL:0000040!4.47e-08!63;CL:0000559!4.47e-08!63;CL:0000945!6.10e-08!24;CL:0000826!6.10e-08!24;CL:0000081!1.05e-07!11;CL:0000624!1.99e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.34e-32;18!CL:0000789;1.34e-32;18!CL:0002419;1.34e-32;18!CL:0000084;4.04e-22;25!CL:0000625;8.47e-22;11!CL:0000542;1.79e-21;53!CL:0000236;4.32e-20;13!CL:0000094;3.91e-19;8!CL:0000081;1.43e-16;11!CL:0002393;5.11e-15;6!CL:0002397;5.11e-15;6!CL:0000624;1.14e-14;6!CL:0000945;1.72e-11;24!CL:0002087;2.13e-11;104!CL:0000898;1.74e-08;3!CL:0000775;3.44e-08;3!CL:0000738;4.00e-08;136!CL:0000988;4.92e-08;177!CL:0000767;4.96e-08;3!CL:0000875;1.70e-07;3!CL:0000623;1.70e-07;3!CL:0002396;1.70e-07;3!CL:0000226;2.90e-07;3!CL:0000842;2.90e-07;3!CL:0000784;6.69e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.12e-51,136;CL:0000037,3.46e-40,168;CL:0000988,1.12e-38,177;CL:0000838,6.31e-37,52;CL:0002087,2.08e-36,115;CL:0000542,4.79e-36,53;CL:0000051,4.79e-36,53;CL:0002031,3.22e-34,120;CL:0002032,2.05e-33,161;CL:0000837,2.05e-33,161;CL:0000791,8.42e-33,18;CL:0000789,8.42e-33,18;CL:0002420,8.42e-33,18;CL:0002419,8.42e-33,18;CL:0000790,8.42e-33,18;CL:0000084,2.93e-22,25;CL:0000827,2.93e-22,25;CL:0000625,5.71e-22,11;CL:0002393,7.25e-21,9;CL:0002397,7.25e-21,9;CL:0000094,3.00e-19,8;CL:0000236,1.47e-18,14;CL:0000081,1.32e-16,11;CL:0000624,1.04e-14,6;CL:0000766,3.70e-13,72;CL:0000945,1.47e-11,24;CL:0000826,1.47e-11,24;CL:0000134,4.61e-11,354;CL:0002320,1.52e-10,361;CL:0000219,9.69e-09,386;CL:0000898,1.74e-08,3;CL:0000775,2.88e-08,3;CL:0000767,4.74e-08,3;CL:0000875,1.22e-07,3;CL:0002396,1.22e-07,3;CL:0000623,1.64e-07,3;CL:0000825,1.64e-07,3;CL:0000860,1.65e-07,42;CL:0002057,1.65e-07,42;CL:0000763,1.70e-07,108;CL:0000049,1.70e-07,108;CL:0000226,3.13e-07,3;CL:0000842,3.13e-07,3;CL:0000048,5.08e-07,427;CL:0000784,8.12e-07,3;CL:0000034,9.23e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000790;1.34e-32;18!CL:0000051;1.79e-21;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.38e-19!102;UBERON:0003061!9.38e-19!102;UBERON:0002193!1.60e-17!112;UBERON:0000178!7.87e-10!15;UBERON:0000179!7.87e-10!15;UBERON:0000463!7.87e-10!15;UBERON:0002371!4.60e-09!80;UBERON:0002405!5.30e-09!115;UBERON:0001474!4.11e-08!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.77e-12,98;UBERON:0003061,7.77e-12,98;UBERON:0002193,4.66e-10,108;UBERON:0002384,7.66e-10,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,11.0141997517693,4.22212337906934,4.95411594611443,0,0,0,0.154934401160603,0.142169232487422,2.64240395401362,14.4038806218288,11.2304890583279,16.058804432973,0.223915474239924,0,0,0.145398238779565,0,0,0,0,0.309706370895104,1.1507695692886,0.512321413058201,0.709446689665756,0.344745680736619,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0.989553900560148,0.997318288108159,0.426224750532694,1.7412554317715,0,0,0,0.521482918420201,0.65156653411535,0.605399502633369,0.368277635987565,0.316462387440884,4.01385043992689,8.07896339867165,4.40283155567589,3.48218756554135,3.30389164251314,3.05378614724452,4.56020389985998,2.98375015798635,4.93193215164512,5.27988733383968,6.55366333514558,9.7846017924991,1.70692089026603,5.20514783146816,5.17277195959035,5.2883589822789,4.77026877267682,3.98449078376614,5.87237189370939,4.58727873750275,0,1.68152568894461,0.790152254325231,6.49142241375649,3.93010762749165,5.55124047298675,2.67498392625085,10.4295125322749,12.3096429491031,11.6896037044747,2.22820913770347,7.65975359434577,8.86135578334484,8.93652750424551,1.92136979588513,2.86130564631732,3.28875809207352,2.21080014228679,2.89803085735052,6.07974908964448,4.54819407752512,2.09071047609954,1.69964014046349,10.7301738208538,7.21617635513523,7.84361045260459,3.50421955756506,1.95325036156926,9.50452044448374,1.80690142893327,1.91979916731628,3.74792179657038,1.4206635122641,2.46338399076314,2.82249440514625,4.54648332831962,4.19990771260117,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,1.90792499444274,4.0039643754609,1.11437250398869,0.39752481473341,0,0.347140501607594,0,0.838998872419812,0,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0.949265659568129,0.366403487860815,7.9068250461638,31.022421131866,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0.435758888184812,0,0,0.196221465125346,0,0.738155454624648,0,0,1.47008711385542,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,1.86595303986695,0.576479813667846,1.51490920111656,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,2.95546140302891,4.31255149719035,4.49200626979119,0,0,0,0,0.637938751653163,17.9761685747324,2.99161459204025,13.6757119433892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,7.11856862701436,2.02782359826544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0.507447609232169,0.764637207142375,1.70894156152249,0.476463550915578,1.23408681925858,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,0,0.0711418433484141,0,0.199579371432817,0.383010740264733,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0.447352215784832,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0.295930216910801,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0.173624994933292,0,0,0,0.331737779793674,0,0,0.10893846351899,0,0,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0.158936578980379,0,0,0,0,0,0.176915129006678,0,1.18608451472249,0.123563938946503,0,0.134802265961354,0,0,0.182454789215666,0,0,0,0,0.30607276163049,0.252746318513952,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0.272406812223151,0.321506296930038,0,0,0.899895566206002,4.6428117273477,0.182248669974074,0,0,0.104909176269996,0.105600336519406,0,0,0,0,0,0.542999601753713,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0.39669780522807,0,0,1.38823636338003,0.314408610199332,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0.122026264901963,0.1251909307065,0,0.443716206147409,0.248385611765534,0.138348634936231,0,0.151649117541648,0,0,0,0.144921028610825,0,0.467426619694449,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0,0.19998739585493,0.106691729694141,2.75543967457305,0,0,0,0,0,0,0,0.109209638192014,0,0,0.123935764259002,0,0,1.41951141002256,0,0,0,0.128458450192919,0,0.478901577171454,0.205116364240755,0.252071696221718,0.276629009856872,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.271878931907327,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0.47775168788705,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0.235676547101626,0,0,0,0,0.751871343838829,1.03132620757723,0.0999411559249289,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0.151557396436479,0,0,0.20686599172379,0,0,0.710478008196067,2.60713800042603,0,0,0,0,0,0.336760265072938,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,11.0141997517693,4.22212337906934,4.95411594611443,0,0,0,0.154934401160603,0.142169232487422,2.64240395401362,14.4038806218288,11.2304890583279,16.058804432973,0.223915474239924,0,0,0.145398238779565,0,0,0,0,0.309706370895104,1.1507695692886,0.512321413058201,0.709446689665756,0.344745680736619,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0.989553900560148,0.997318288108159,0.426224750532694,1.7412554317715,0,0,0,0.521482918420201,0.65156653411535,0.605399502633369,0.368277635987565,0.316462387440884,4.01385043992689,8.07896339867165,4.40283155567589,3.48218756554135,3.30389164251314,3.05378614724452,4.56020389985998,2.98375015798635,4.93193215164512,5.27988733383968,6.55366333514558,9.7846017924991,1.70692089026603,5.20514783146816,5.17277195959035,5.2883589822789,4.77026877267682,3.98449078376614,5.87237189370939,4.58727873750275,0,1.68152568894461,0.790152254325231,6.49142241375649,3.93010762749165,5.55124047298675,2.67498392625085,10.4295125322749,12.3096429491031,11.6896037044747,2.22820913770347,7.65975359434577,8.86135578334484,8.93652750424551,1.92136979588513,2.86130564631732,3.28875809207352,2.21080014228679,2.89803085735052,6.07974908964448,4.54819407752512,2.09071047609954,1.69964014046349,10.7301738208538,7.21617635513523,7.84361045260459,3.50421955756506,1.95325036156926,9.50452044448374,1.80690142893327,1.91979916731628,3.74792179657038,1.4206635122641,2.46338399076314,2.82249440514625,4.54648332831962,4.19990771260117,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,1.90792499444274,4.0039643754609,1.11437250398869,0.39752481473341,0,0.347140501607594,0,0.838998872419812,0,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0.949265659568129,0.366403487860815,7.9068250461638,31.022421131866,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0.435758888184812,0,0,0.196221465125346,0,0.738155454624648,0,0,1.47008711385542,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,1.86595303986695,0.576479813667846,1.51490920111656,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,2.95546140302891,4.31255149719035,4.49200626979119,0,0,0,0,0.637938751653163,17.9761685747324,2.99161459204025,13.6757119433892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,7.11856862701436,2.02782359826544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0.507447609232169,0.764637207142375,1.70894156152249,0.476463550915578,1.23408681925858,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,0,0.0711418433484141,0,0.199579371432817,0.383010740264733,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0.447352215784832,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0.295930216910801,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0.173624994933292,0,0,0,0.331737779793674,0,0,0.10893846351899,0,0,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0.158936578980379,0,0,0,0,0,0.176915129006678,0,1.18608451472249,0.123563938946503,0,0.134802265961354,0,0,0.182454789215666,0,0,0,0,0.30607276163049,0.252746318513952,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0.272406812223151,0.321506296930038,0,0,0.899895566206002,4.6428117273477,0.182248669974074,0,0,0.104909176269996,0.105600336519406,0,0,0,0,0,0.542999601753713,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0.39669780522807,0,0,1.38823636338003,0.314408610199332,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0.122026264901963,0.1251909307065,0,0.443716206147409,0.248385611765534,0.138348634936231,0,0.151649117541648,0,0,0,0.144921028610825,0,0.467426619694449,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0,0.19998739585493,0.106691729694141,2.75543967457305,0,0,0,0,0,0,0,0.109209638192014,0,0,0.123935764259002,0,0,1.41951141002256,0,0,0,0.128458450192919,0,0.478901577171454,0.205116364240755,0.252071696221718,0.276629009856872,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0.271878931907327,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0.47775168788705,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0.235676547101626,0,0,0,0,0.751871343838829,1.03132620757723,0.0999411559249289,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0.151557396436479,0,0,0.20686599172379,0,0,0.710478008196067,2.60713800042603,0,0,0,0,0,0.336760265072938,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p@chr4:78741549..78741569,+ | |||
}} | }} |
Latest revision as of 07:07, 30 July 2015
Short description: | p@chr4:78741549..78741569, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:78741549..78741569, + |
Coexpression cluster: | C2148_Eosinophils_CD4_CD19_Neutrophils_CD14_Basophils_CD14CD16 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.77e-12 | 98 |
blood island | 7.77e-12 | 98 |
hemolymphoid system | 4.66e-10 | 108 |
connective tissue | 7.66e-10 | 371 |