FFCP PHASE1:Hg19::chr4:78741389..78741433,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:78741389..78741433,- | |||
|coexpression_cluster_id=C1055 | |coexpression_cluster_id=C1055 | ||
|description=CAGE_peak_at_chr4:78741389..78741433,- | |description=CAGE_peak_at_chr4:78741389..78741433,- | ||
|id=chr4:78741389..78741433,- | |id=chr4:78741389..78741433,- | ||
|ontology_enrichment_celltype=CL:0000791;3.54e-11;18!CL:0000789;3.54e-11;18!CL:0002419;3.54e-11;18!CL:0000084;1.15e-08;25!CL:0000625;6.37e-08;11!CL:0000860;1.25e-07;33!CL:0002057;1.25e-07;33!CL:0000576;1.47e-07;48!CL:0002087;8.98e-07;104 | |ontology_enrichment_celltype=CL:0000738!5.12e-21!140;CL:0000037!9.48e-18!172;CL:0000566!9.48e-18!172;CL:0002087!3.80e-16!119;CL:0000988!2.86e-15!182;CL:0002032!2.90e-15!165;CL:0000837!2.90e-15!165;CL:0002031!7.48e-15!124;CL:0000791!3.39e-11!18;CL:0000789!3.39e-11!18;CL:0002420!3.39e-11!18;CL:0002419!3.39e-11!18;CL:0000790!3.39e-11!18;CL:0000766!1.64e-10!76;CL:0002057!5.64e-10!42;CL:0000860!4.16e-09!45;CL:0000084!1.16e-08!25;CL:0000827!1.16e-08!25;CL:0000557!2.36e-08!71;CL:0000838!2.80e-08!52;CL:0000542!3.23e-08!53;CL:0000051!3.23e-08!53;CL:0000763!6.05e-08!112;CL:0000049!6.05e-08!112;CL:0002009!6.36e-08!65;CL:0000625!6.47e-08!11;CL:0002194!2.02e-07!63;CL:0000576!2.02e-07!63;CL:0000040!2.02e-07!63;CL:0000559!2.02e-07!63;CL:0000839!5.34e-07!70 | ||
| | |ontology_enrichment_celltype_v019=CL:0000791;3.54e-11;18!CL:0000789;3.54e-11;18!CL:0002419;3.54e-11;18!CL:0000084;1.15e-08;25!CL:0000625;6.37e-08;11!CL:0000860;1.25e-07;33!CL:0002057;1.25e-07;33!CL:0000576;1.47e-07;48!CL:0002087;8.98e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.26e-22,136;CL:0000037,1.47e-18,168;CL:0002087,3.79e-17,115;CL:0002032,5.19e-16,161;CL:0000837,5.19e-16,161;CL:0000988,6.51e-16,177;CL:0002031,9.23e-16,120;CL:0000766,1.62e-11,72;CL:0000791,3.39e-11,18;CL:0000789,3.39e-11,18;CL:0002420,3.39e-11,18;CL:0002419,3.39e-11,18;CL:0000790,3.39e-11,18;CL:0000860,5.64e-10,42;CL:0002057,5.64e-10,42;CL:0000557,3.13e-09,67;CL:0002009,8.03e-09,61;CL:0000084,1.16e-08,25;CL:0000827,1.16e-08,25;CL:0000763,1.52e-08,108;CL:0000049,1.52e-08,108;CL:0002194,2.72e-08,59;CL:0000576,2.72e-08,59;CL:0000040,2.72e-08,59;CL:0000559,2.72e-08,59;CL:0000838,2.80e-08,52;CL:0000542,3.23e-08,53;CL:0000051,3.23e-08,53;CL:0000625,6.47e-08,11;CL:0000473,8.06e-08,48;CL:0000234,8.06e-08,48;CL:0000839,9.20e-08,66 | |||
|ontology_enrichment_development_v019=CL:0000790;3.54e-11;18!CL:0002057;1.40e-07;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0007023;1.18e-07;114 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.14e-27!115;UBERON:0002193!1.66e-12!112;UBERON:0002390!1.50e-11!102;UBERON:0003061!1.50e-11!102;UBERON:0001049!1.80e-08!57;UBERON:0005068!1.80e-08!57;UBERON:0006241!1.80e-08!57;UBERON:0007135!1.80e-08!57;UBERON:0002405!1.02e-07!115;UBERON:0003080!2.55e-07!42;UBERON:0002780!6.46e-07!41;UBERON:0001890!6.46e-07!41;UBERON:0006240!6.46e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.18e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.16e-27,114;UBERON:0002193,2.30e-13,108;UBERON:0002390,2.04e-12,98;UBERON:0003061,2.04e-12,98;UBERON:0002405,1.21e-09,93;UBERON:0001049,4.43e-08,56;UBERON:0005068,4.43e-08,56;UBERON:0006241,4.43e-08,56;UBERON:0007135,4.43e-08,56;UBERON:0000073,2.14e-07,53;UBERON:0002616,2.14e-07,53;UBERON:0002371,5.73e-07,76;UBERON:0001474,5.98e-07,82;UBERON:0002780,6.46e-07,41;UBERON:0001890,6.46e-07,41;UBERON:0003080,6.46e-07,41;UBERON:0006240,6.46e-07,41 | |||
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4.16739039994203 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|short_description=p@chr4:78741389..78741433,- | |short_description=p@chr4:78741389..78741433,- | ||
}} | }} |
Latest revision as of 07:07, 30 July 2015
Short description: | p@chr4:78741389..78741433, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:78741389..78741433, - |
Coexpression cluster: | C1055_CD19_thymus_CD4_CD8_Neutrophils_Natural_cerebellum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.16e-27 | 114 |
hemolymphoid system | 2.30e-13 | 108 |
hematopoietic system | 2.04e-12 | 98 |
blood island | 2.04e-12 | 98 |
immune system | 1.21e-09 | 93 |
neural tube | 4.43e-08 | 56 |
neural rod | 4.43e-08 | 56 |
future spinal cord | 4.43e-08 | 56 |
neural keel | 4.43e-08 | 56 |
regional part of nervous system | 2.14e-07 | 53 |
regional part of brain | 2.14e-07 | 53 |
bone marrow | 5.73e-07 | 76 |
bone element | 5.98e-07 | 82 |
regional part of forebrain | 6.46e-07 | 41 |
forebrain | 6.46e-07 | 41 |
anterior neural tube | 6.46e-07 | 41 |
future forebrain | 6.46e-07 | 41 |