FFCP PHASE1:Hg19::chr4:7846444..7846449,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:7846444..7846449,- | |||
|description=CAGE_peak_at_chr4:7846444..7846449,- | |description=CAGE_peak_at_chr4:7846444..7846449,- | ||
|id=chr4:7846444..7846449,- | |id=chr4:7846444..7846449,- | ||
|ontology_enrichment_celltype=CL:0000359!1.38e-34!32;CL:0000055!2.68e-32!180;CL:0000192!4.49e-32!42;CL:0000514!4.49e-32!42;CL:0000187!1.65e-27!54;CL:0000680!1.29e-26!57;CL:0000056!1.29e-26!57;CL:0000355!1.29e-26!57;CL:0000222!1.10e-24!119;CL:0000183!5.48e-24!59;CL:0000393!2.34e-23!60;CL:0000211!2.34e-23!60;CL:0000057!1.34e-17!75;CL:0000220!3.43e-15!246;CL:0002321!7.14e-15!248;CL:0002494!4.15e-14!16;CL:0000144!3.30e-12!625;CL:0002539!4.98e-11!10;CL:0000548!7.52e-11!679;CL:0000004!7.52e-11!679;CL:0000255!7.52e-11!679;CL:0002371!1.00e-10!591;CL:0000012!1.32e-10!682;CL:0000048!9.96e-10!430;CL:0000723!1.51e-09!436;CL:0000034!7.40e-09!444;CL:0002595!7.74e-08!5;CL:0002548!8.44e-08!6;CL:0000003!1.41e-07!722;CL:0002620!1.95e-07!23 | |ontology_enrichment_celltype=CL:0000359!1.38e-34!32;CL:0000055!2.68e-32!180;CL:0000192!4.49e-32!42;CL:0000514!4.49e-32!42;CL:0000187!1.65e-27!54;CL:0000680!1.29e-26!57;CL:0000056!1.29e-26!57;CL:0000355!1.29e-26!57;CL:0000222!1.10e-24!119;CL:0000183!5.48e-24!59;CL:0000393!2.34e-23!60;CL:0000211!2.34e-23!60;CL:0000057!1.34e-17!75;CL:0000220!3.43e-15!246;CL:0002321!7.14e-15!248;CL:0002494!4.15e-14!16;CL:0000144!3.30e-12!625;CL:0002539!4.98e-11!10;CL:0000548!7.52e-11!679;CL:0000004!7.52e-11!679;CL:0000255!7.52e-11!679;CL:0002371!1.00e-10!591;CL:0000012!1.32e-10!682;CL:0000048!9.96e-10!430;CL:0000723!1.51e-09!436;CL:0000034!7.40e-09!444;CL:0002595!7.74e-08!5;CL:0002548!8.44e-08!6;CL:0000003!1.41e-07!722;CL:0002620!1.95e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.90e-66;32!CL:0000192;1.20e-36;43!CL:0002539;5.60e-23;10!CL:0002595;2.76e-18;5!CL:0000187;7.05e-18;55!CL:0000393;5.78e-16;61!CL:0000211;5.78e-16;61!CL:1000306;1.53e-15;4!CL:0002547;1.53e-15;4!CL:0002594;2.97e-15;4!CL:0002494;1.08e-13;16!CL:0002592;3.78e-12;3!CL:0000569;5.72e-09;4!CL:0002593;2.13e-08;2!CL:0002589;2.91e-08;2!CL:0002596;2.91e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.38e-72,32;CL:0000192,5.68e-52,43;CL:0000514,5.68e-52,43;CL:0000187,3.85e-39,55;CL:0000680,9.17e-37,58;CL:0000056,9.17e-37,58;CL:0000355,9.17e-37,58;CL:0000393,1.27e-34,61;CL:0000211,1.27e-34,61;CL:0002539,5.39e-23,10;CL:0002595,1.55e-18,5;CL:0000222,5.33e-17,121;CL:0002594,2.26e-15,4;CL:1000306,2.44e-15,4;CL:0002547,2.44e-15,4;CL:0002494,9.04e-14,16;CL:0002592,2.76e-12,3;CL:0000048,1.43e-11,427;CL:0000723,2.95e-11,433;CL:0000034,7.49e-11,441;CL:0000569,5.58e-09,4;CL:0000011,5.58e-09,4;CL:0002593,2.17e-08,2;CL:0002596,2.71e-08,2;CL:0002589,3.90e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000514;1.20e-36;43!CL:0000355;4.46e-17;58!CL:0000011;5.72e-09;4 | |||
|ontology_enrichment_disease=DOID:2394!1.92e-14!14;DOID:193!9.38e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.16e-19;14!DOID:120;2.95e-09;27!DOID:193;1.66e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.84e-19,14;DOID:120,3.36e-09,27;DOID:193,1.87e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.18e-38!42;UBERON:0003509!1.18e-38!42;UBERON:0004572!1.18e-38!42;UBERON:0004872!6.63e-34!84;UBERON:0001981!1.40e-30!60;UBERON:0007500!1.40e-30!60;UBERON:0004537!1.40e-30!60;UBERON:0006965!1.40e-30!60;UBERON:0002049!1.80e-30!79;UBERON:0007798!1.80e-30!79;UBERON:0004535!1.35e-29!110;UBERON:0000055!1.71e-28!69;UBERON:0001009!3.06e-28!113;UBERON:0004573!4.43e-28!33;UBERON:0004571!4.43e-28!33;UBERON:0001134!6.14e-24!61;UBERON:0002036!6.14e-24!61;UBERON:0003082!6.14e-24!61;UBERON:0002385!9.85e-23!63;UBERON:0001015!9.85e-23!63;UBERON:0000383!9.85e-23!63;UBERON:0003914!3.88e-22!118;UBERON:0004290!2.77e-20!70;UBERON:0000914!7.40e-20!83;UBERON:0002329!7.40e-20!83;UBERON:0003077!7.40e-20!83;UBERON:0003059!7.40e-20!83;UBERON:0007282!7.40e-20!83;UBERON:0009618!7.40e-20!83;UBERON:0007285!7.40e-20!83;UBERON:0000490!1.07e-18!138;UBERON:0000486!2.41e-16!82;UBERON:0000947!7.05e-14!21;UBERON:0010191!7.05e-14!21;UBERON:0005256!2.60e-11!143;UBERON:0000948!4.80e-11!24;UBERON:0005498!4.80e-11!24;UBERON:0004140!4.80e-11!24;UBERON:0009881!4.80e-11!24;UBERON:0004141!4.80e-11!24;UBERON:0003084!4.80e-11!24;UBERON:0007005!4.80e-11!24;UBERON:0004139!4.80e-11!24;UBERON:0004291!4.80e-11!24;UBERON:0004237!4.98e-11!10;UBERON:0004695!4.98e-11!10;UBERON:0002111!4.98e-11!10;UBERON:0004178!4.98e-11!10;UBERON:0001135!2.29e-09!15;UBERON:0007100!2.89e-09!27;UBERON:0004111!1.30e-08!241;UBERON:0000025!1.46e-08!194;UBERON:0000477!1.78e-08!286;UBERON:0000992!1.79e-08!13;UBERON:0000119!4.78e-08!312;UBERON:0003498!5.43e-08!5;UBERON:0005985!5.43e-08!5;UBERON:0003834!7.74e-08!5;UBERON:0001533!7.74e-08!5;UBERON:0000483!1.40e-07!309;UBERON:0002118!2.30e-07!5;UBERON:0004532!2.30e-07!5;UBERON:0002100!3.69e-07!216 | |ontology_enrichment_uberon=UBERON:0001637!1.18e-38!42;UBERON:0003509!1.18e-38!42;UBERON:0004572!1.18e-38!42;UBERON:0004872!6.63e-34!84;UBERON:0001981!1.40e-30!60;UBERON:0007500!1.40e-30!60;UBERON:0004537!1.40e-30!60;UBERON:0006965!1.40e-30!60;UBERON:0002049!1.80e-30!79;UBERON:0007798!1.80e-30!79;UBERON:0004535!1.35e-29!110;UBERON:0000055!1.71e-28!69;UBERON:0001009!3.06e-28!113;UBERON:0004573!4.43e-28!33;UBERON:0004571!4.43e-28!33;UBERON:0001134!6.14e-24!61;UBERON:0002036!6.14e-24!61;UBERON:0003082!6.14e-24!61;UBERON:0002385!9.85e-23!63;UBERON:0001015!9.85e-23!63;UBERON:0000383!9.85e-23!63;UBERON:0003914!3.88e-22!118;UBERON:0004290!2.77e-20!70;UBERON:0000914!7.40e-20!83;UBERON:0002329!7.40e-20!83;UBERON:0003077!7.40e-20!83;UBERON:0003059!7.40e-20!83;UBERON:0007282!7.40e-20!83;UBERON:0009618!7.40e-20!83;UBERON:0007285!7.40e-20!83;UBERON:0000490!1.07e-18!138;UBERON:0000486!2.41e-16!82;UBERON:0000947!7.05e-14!21;UBERON:0010191!7.05e-14!21;UBERON:0005256!2.60e-11!143;UBERON:0000948!4.80e-11!24;UBERON:0005498!4.80e-11!24;UBERON:0004140!4.80e-11!24;UBERON:0009881!4.80e-11!24;UBERON:0004141!4.80e-11!24;UBERON:0003084!4.80e-11!24;UBERON:0007005!4.80e-11!24;UBERON:0004139!4.80e-11!24;UBERON:0004291!4.80e-11!24;UBERON:0004237!4.98e-11!10;UBERON:0004695!4.98e-11!10;UBERON:0002111!4.98e-11!10;UBERON:0004178!4.98e-11!10;UBERON:0001135!2.29e-09!15;UBERON:0007100!2.89e-09!27;UBERON:0004111!1.30e-08!241;UBERON:0000025!1.46e-08!194;UBERON:0000477!1.78e-08!286;UBERON:0000992!1.79e-08!13;UBERON:0000119!4.78e-08!312;UBERON:0003498!5.43e-08!5;UBERON:0005985!5.43e-08!5;UBERON:0003834!7.74e-08!5;UBERON:0001533!7.74e-08!5;UBERON:0000483!1.40e-07!309;UBERON:0002118!2.30e-07!5;UBERON:0004532!2.30e-07!5;UBERON:0002100!3.69e-07!216 | ||
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|short_description=p@chr4:7846444..7846449,- | |short_description=p@chr4:7846444..7846449,- | ||
}} | }} |
Latest revision as of 07:05, 30 July 2015
Short description: | p@chr4:7846444..7846449, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:7846444..7846449, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.38e-72 | 32 |
smooth muscle cell | 5.68e-52 | 43 |
smooth muscle myoblast | 5.68e-52 | 43 |
muscle cell | 3.85e-39 | 55 |
muscle precursor cell | 9.17e-37 | 58 |
myoblast | 9.17e-37 | 58 |
multi-potent skeletal muscle stem cell | 9.17e-37 | 58 |
electrically responsive cell | 1.27e-34 | 61 |
electrically active cell | 1.27e-34 | 61 |
aortic smooth muscle cell | 5.39e-23 | 10 |
smooth muscle cell of the subclavian artery | 1.55e-18 | 5 |
mesodermal cell | 5.33e-17 | 121 |
smooth muscle cell of the umbilical artery | 2.26e-15 | 4 |
fibroblast of tunica adventitia of artery | 2.44e-15 | 4 |
fibroblast of the aortic adventitia | 2.44e-15 | 4 |
cardiocyte | 9.04e-14 | 16 |
smooth muscle cell of the coronary artery | 2.76e-12 | 3 |
multi fate stem cell | 1.43e-11 | 427 |
somatic stem cell | 2.95e-11 | 433 |
stem cell | 7.49e-11 | 441 |
cardiac mesenchymal cell | 5.58e-09 | 4 |
migratory trunk neural crest cell | 5.58e-09 | 4 |
smooth muscle cell of the internal thoracic artery | 2.17e-08 | 2 |
smooth muscle cell of the carotid artery | 2.71e-08 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 3.90e-08 | 2 |
Ontology term | p-value | n |
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