FFCP PHASE1:Hg19::chr4:779349..779383,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:779349..779383,+ | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_at_chr4:779349..779383,+ | |description=CAGE_peak_at_chr4:779349..779383,+ | ||
|id=chr4:779349..779383,+ | |id=chr4:779349..779383,+ | ||
|ontology_enrichment_celltype=CL:0000039!5.74e-17!7;CL:0000586!5.74e-17!7;CL:0002322!2.46e-13!5;CL:0002598!1.88e-08!1 | |ontology_enrichment_celltype=CL:0000039!5.74e-17!7;CL:0000586!5.74e-17!7;CL:0002322!2.46e-13!5;CL:0002598!1.88e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.15e-112;7!CL:0000586;3.15e-112;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.15e-112,7;CL:0000586,3.15e-112,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.78e-79;10!UBERON:0005564;5.78e-79;10!UBERON:0006603;8.14e-08;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;1.49e-36;22!DOID:2994;1.49e-36;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.49e-36,22;DOID:2994,1.49e-36,22;DOID:305,2.62e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0000473!7.23e-15!8;UBERON:0001950!3.93e-11!20;UBERON:0003135!7.56e-11!11;UBERON:0005743!1.09e-10!86;UBERON:0002619!4.03e-10!22;UBERON:0001017!1.48e-09!82;UBERON:0000073!1.78e-09!94;UBERON:0001016!1.78e-09!94;UBERON:0003056!2.30e-09!61;UBERON:0002780!2.34e-09!41;UBERON:0001890!2.34e-09!41;UBERON:0006240!2.34e-09!41;UBERON:0001869!2.43e-09!32;UBERON:0003080!4.09e-09!42;UBERON:0002791!4.84e-09!33;UBERON:0000956!6.78e-09!25;UBERON:0000203!6.78e-09!25;UBERON:0002020!9.26e-09!34;UBERON:0003528!9.26e-09!34;UBERON:0001893!9.26e-09!34;UBERON:0001871!2.62e-08!7;UBERON:0002902!3.57e-08!1;UBERON:0009899!3.57e-08!1;UBERON:0000955!5.41e-08!69;UBERON:0006238!5.41e-08!69;UBERON:0002581!5.82e-08!1;UBERON:0002022!7.16e-08!1 | |ontology_enrichment_uberon=UBERON:0000473!7.23e-15!8;UBERON:0001950!3.93e-11!20;UBERON:0003135!7.56e-11!11;UBERON:0005743!1.09e-10!86;UBERON:0002619!4.03e-10!22;UBERON:0001017!1.48e-09!82;UBERON:0000073!1.78e-09!94;UBERON:0001016!1.78e-09!94;UBERON:0003056!2.30e-09!61;UBERON:0002780!2.34e-09!41;UBERON:0001890!2.34e-09!41;UBERON:0006240!2.34e-09!41;UBERON:0001869!2.43e-09!32;UBERON:0003080!4.09e-09!42;UBERON:0002791!4.84e-09!33;UBERON:0000956!6.78e-09!25;UBERON:0000203!6.78e-09!25;UBERON:0002020!9.26e-09!34;UBERON:0003528!9.26e-09!34;UBERON:0001893!9.26e-09!34;UBERON:0001871!2.62e-08!7;UBERON:0002902!3.57e-08!1;UBERON:0009899!3.57e-08!1;UBERON:0000955!5.41e-08!69;UBERON:0006238!5.41e-08!69;UBERON:0002581!5.82e-08!1;UBERON:0002022!7.16e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.26e-98;8!UBERON:0003135;6.65e-72;11!UBERON:0000991;3.06e-38;21!UBERON:0003101;1.49e-36;22!UBERON:0000079;1.49e-36;22!UBERON:0002323;4.89e-17;45!UBERON:0003133;5.60e-14;44!UBERON:0000922;1.73e-13;49!UBERON:0002553;4.70e-11;52!UBERON:0004458;1.35e-09;48!UBERON:0005156;4.31e-09;59!UBERON:0000990;4.31e-09;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.26e-98,8;UBERON:0003135,6.65e-72,11;UBERON:0000991,3.06e-38,21;UBERON:0009196,3.06e-38,21;UBERON:0009117,3.06e-38,21;UBERON:0005564,3.06e-38,21;UBERON:0004176,1.49e-36,22;UBERON:0003101,1.49e-36,22;UBERON:0000079,1.49e-36,22;UBERON:0002323,5.01e-18,46;UBERON:0003133,2.57e-17,48;UBERON:0004458,5.55e-17,49;UBERON:0003886,1.70e-15,54;UBERON:0005156,2.92e-14,59;UBERON:0000990,2.92e-14,59;UBERON:0002553,7.99e-14,61 | |||
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|short_description=p@chr4:779349..779383,+ | |short_description=p@chr4:779349..779383,+ | ||
}} | }} |
Latest revision as of 07:02, 30 July 2015
Short description: | p@chr4:779349..779383, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:779349..779383, + |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.15e-112 | 7 |
germ cell | 3.15e-112 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 2.26e-98 | 8 |
male reproductive organ | 6.65e-72 | 11 |
gonad | 3.06e-38 | 21 |
indifferent external genitalia | 3.06e-38 | 21 |
indifferent gonad | 3.06e-38 | 21 |
gonad primordium | 3.06e-38 | 21 |
external genitalia | 1.49e-36 | 22 |
male organism | 1.49e-36 | 22 |
male reproductive system | 1.49e-36 | 22 |
body cavity | 5.01e-18 | 46 |
reproductive organ | 2.57e-17 | 48 |
body cavity or lining | 5.55e-17 | 49 |
body cavity precursor | 1.70e-15 | 54 |
reproductive structure | 2.92e-14 | 59 |
reproductive system | 2.92e-14 | 59 |
anatomical cavity | 7.99e-14 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.49e-36 | 22 |
germ cell cancer | 1.49e-36 | 22 |
carcinoma | 2.62e-08 | 106 |