FFCP PHASE1:Hg19::chr4:75410084..75410098,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:75410084..75410098,+ | |||
|coexpression_cluster_id=C186 | |coexpression_cluster_id=C186 | ||
|description=CAGE_peak_at_chr4:75410084..75410098,+ | |description=CAGE_peak_at_chr4:75410084..75410098,+ | ||
|id=chr4:75410084..75410098,+ | |id=chr4:75410084..75410098,+ | ||
|ontology_enrichment_celltype=CL:0002076;1.69e-13;42!CL:0002368;4.11e-12;13!CL:0002548;7.48e-12;6!CL:0002231;6.88e-07;3!CL:0000322;7.70e-07;3!CL:0002178;7.70e-07;3 | |ontology_enrichment_celltype=CL:0002076!4.43e-18!43;CL:0002368!8.34e-18!13;CL:0000223!2.80e-15!59;CL:0000066!3.74e-12!254;CL:0002202!2.94e-08!9;CL:0002632!2.94e-08!9 | ||
| | |ontology_enrichment_celltype_v019=CL:0002076;1.69e-13;42!CL:0002368;4.11e-12;13!CL:0002548;7.48e-12;6!CL:0002231;6.88e-07;3!CL:0000322;7.70e-07;3!CL:0002178;7.70e-07;3 | ||
|ontology_enrichment_disease=DOID:3111;1.22e-17;1!DOID:3603;1.22e-17;1!DOID:4074;8.69e-10;2!DOID:4905;8.69e-10;2!DOID:3498;8.69e-10;2!DOID:3910;1.22e-09;2!DOID:3493;1.22e-09;2 | |ontology_enrichment_celltype_v019_2=CL:0002076,5.15e-14,42;CL:0000223,1.21e-13,58;CL:0002368,4.43e-12,13;CL:0002548,6.70e-12,6;CL:0002231,6.88e-07,3;CL:0002178,7.28e-07,3;CL:0000322,7.70e-07,3 | ||
|ontology_enrichment_uberon=UBERON:0004903;1.22e-09;2!UBERON:0002173;1.22e-09;2!UBERON:0002186;1.22e-09;2!UBERON:0004821;7.70e-07;3!UBERON:0007499;7.70e-07;3!UBERON:0003215;7.70e-07;3!UBERON:0010368;7.70e-07;3!UBERON:0009911;7.70e-07;3!UBERON:0002299;7.70e-07;3!UBERON:0006524;7.70e-07;3!UBERON:0008874;7.70e-07;3!UBERON:0002169;7.70e-07;3!UBERON:0004894;7.70e-07;3 | |ontology_enrichment_development_v019=CL:0000223;4.48e-08;58 | ||
|ontology_enrichment_disease=DOID:305!9.67e-10!106;DOID:299!5.42e-08!25;DOID:4074!1.99e-07!2;DOID:4905!1.99e-07!2;DOID:3498!1.99e-07!2;DOID:0050687!3.37e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3111;1.22e-17;1!DOID:3603;1.22e-17;1!DOID:4074;8.69e-10;2!DOID:4905;8.69e-10;2!DOID:3498;8.69e-10;2!DOID:3910;1.22e-09;2!DOID:3493;1.22e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,1.44e-17,1;DOID:3603,1.44e-17,1;DOID:4074,8.69e-10,2;DOID:4905,8.69e-10,2;DOID:3498,8.69e-10,2;DOID:3493,1.12e-09,2;DOID:3910,1.22e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.90e-10!169;UBERON:0000925!3.90e-10!169;UBERON:0006595!3.90e-10!169;UBERON:0000065!6.72e-09!53;UBERON:0000077!2.41e-08!130;UBERON:0003104!7.82e-08!238;UBERON:0009142!7.82e-08!238;UBERON:0000464!7.94e-08!104;UBERON:0001004!1.38e-07!72;UBERON:0001007!2.42e-07!155;UBERON:0001555!2.42e-07!155;UBERON:0007026!2.42e-07!155;UBERON:0000466!3.99e-07!126;UBERON:0003914!4.06e-07!118;UBERON:0007196!5.37e-07!14;UBERON:0001558!5.37e-07!14;UBERON:0002294!6.98e-07!7;UBERON:0001173!6.98e-07!7;UBERON:0004912!6.98e-07!7;UBERON:0001041!7.41e-07!98;UBERON:0004921!9.08e-07!129;UBERON:0004185!9.08e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.22e-09;2!UBERON:0002173;1.22e-09;2!UBERON:0002186;1.22e-09;2!UBERON:0004821;7.70e-07;3!UBERON:0007499;7.70e-07;3!UBERON:0003215;7.70e-07;3!UBERON:0010368;7.70e-07;3!UBERON:0009911;7.70e-07;3!UBERON:0002299;7.70e-07;3!UBERON:0006524;7.70e-07;3!UBERON:0008874;7.70e-07;3!UBERON:0002169;7.70e-07;3!UBERON:0004894;7.70e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.22e-09,2;UBERON:0002173,1.22e-09,2;UBERON:0002186,1.22e-09,2;UBERON:0004821,7.70e-07,3;UBERON:0003215,7.70e-07,3;UBERON:0010368,7.70e-07,3;UBERON:0009911,7.70e-07,3;UBERON:0002299,7.70e-07,3;UBERON:0006524,7.70e-07,3;UBERON:0008874,7.70e-07,3;UBERON:0002169,7.70e-07,3;UBERON:0004894,7.70e-07,3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794455084879313,0.286836620748814,0,0,1.06748995729705,0,0,1.34710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,2.24803506515239,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,3.95948252424354,0,0.182091168006717,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.48335359146061,0,0,0,0,0,0,0,5.12383237619032,0.768760269460425,1.02090169995667,0.6069466851333,0,0,0,0,0,0.869932992075073,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0.520855522170466,0,0.724999575434793,0,2.2882828526349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,8.74009366322734,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.277349346026277,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.391102765469606,0.160317640503067,0,0,0.144090417154106,0.687219576995494,0,0.432164393964449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844802692155252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,1.05656061679314,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0.887136517302272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0.118332000730565,0,0,1.14553434272025,0,0,0,2.45375584038107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,14.1157948686277,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.244209805832924,0.320182037633146,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:75410084..75410098,+ | |short_description=p@chr4:75410084..75410098,+ | ||
}} | }} |
Latest revision as of 06:50, 30 July 2015
Short description: | p@chr4:75410084..75410098, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:75410084..75410098, + |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 5.15e-14 | 42 |
endodermal cell | 1.21e-13 | 58 |
respiratory epithelial cell | 4.43e-12 | 13 |
cardiac fibroblast | 6.70e-12 | 6 |
epithelial cell of prostate | 6.88e-07 | 3 |
epithelial cell of stomach | 7.28e-07 | 3 |
pneumocyte | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.22e-09 | 2 |
alveolar duct | 1.22e-09 | 2 |
bronchiole | 1.22e-09 | 2 |
pulmonary alveolus epithelium | 7.70e-07 | 3 |
alveolus | 7.70e-07 | 3 |
pulmonary lobule | 7.70e-07 | 3 |
lobule | 7.70e-07 | 3 |
alveolus of lung | 7.70e-07 | 3 |
alveolar system | 7.70e-07 | 3 |
pulmonary acinus | 7.70e-07 | 3 |
alveolar sac | 7.70e-07 | 3 |
alveolar wall | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 1.44e-17 | 1 |
mucinous cystadenocarcinoma | 1.44e-17 | 1 |
pancreas adenocarcinoma | 8.69e-10 | 2 |
pancreatic carcinoma | 8.69e-10 | 2 |
pancreatic ductal adenocarcinoma | 8.69e-10 | 2 |
signet ring cell adenocarcinoma | 1.12e-09 | 2 |
lung adenocarcinoma | 1.22e-09 | 2 |