FFCP PHASE1:Hg19::chr4:74810127..74810130,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-111bp_to_ENST00000502804_5end | |association_with_transcript=-111bp_to_ENST00000502804_5end | ||
|cluster_id=chr4:74810127..74810130,- | |||
|coexpression_cluster_id=C773 | |coexpression_cluster_id=C773 | ||
|description=CAGE_peak_1_at_ENST00000502804_5end | |description=CAGE_peak_1_at_ENST00000502804_5end | ||
|id=chr4:74810127..74810130,- | |id=chr4:74810127..74810130,- | ||
|ontology_enrichment_celltype=CL:0000359!4.04e-21!32;CL:0000192!6.99e-16!42;CL:0000514!6.99e-16!42;CL:0000680!7.15e-12!57;CL:0000056!7.15e-12!57;CL:0000355!7.15e-12!57;CL:0000187!8.78e-12!54;CL:0000393!8.20e-11!60;CL:0000211!8.20e-11!60;CL:0002539!2.01e-10!10;CL:0000183!3.53e-10!59;CL:0002595!1.72e-09!5;CL:0000222!1.41e-08!119;CL:0000548!2.41e-08!679;CL:0000004!2.41e-08!679;CL:0000255!2.41e-08!679;CL:0000012!3.66e-08!682;CL:0000220!5.28e-08!246;CL:0002371!5.72e-08!591;CL:0002321!8.03e-08!248;CL:0000144!8.31e-07!625 | |ontology_enrichment_celltype=CL:0000359!4.04e-21!32;CL:0000192!6.99e-16!42;CL:0000514!6.99e-16!42;CL:0000680!7.15e-12!57;CL:0000056!7.15e-12!57;CL:0000355!7.15e-12!57;CL:0000187!8.78e-12!54;CL:0000393!8.20e-11!60;CL:0000211!8.20e-11!60;CL:0002539!2.01e-10!10;CL:0000183!3.53e-10!59;CL:0002595!1.72e-09!5;CL:0000222!1.41e-08!119;CL:0000548!2.41e-08!679;CL:0000004!2.41e-08!679;CL:0000255!2.41e-08!679;CL:0000012!3.66e-08!682;CL:0000220!5.28e-08!246;CL:0002371!5.72e-08!591;CL:0002321!8.03e-08!248;CL:0000144!8.31e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000359;7.76e-35;32!CL:0002595;5.97e-21;5!CL:0000192;2.19e-18;43!CL:0002539;1.23e-15;10!CL:0000569;7.21e-15;4!CL:0002593;3.50e-14;2!CL:0002494;9.39e-14;16!CL:0000187;1.71e-10;55!CL:0002592;1.40e-09;3!CL:0000393;8.89e-07;61!CL:0000211;8.89e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,7.92e-36,32;CL:0000192,5.99e-26,43;CL:0000514,5.99e-26,43;CL:0002595,7.73e-21,5;CL:0000187,1.12e-19,55;CL:0000680,1.63e-18,58;CL:0000056,1.63e-18,58;CL:0000355,1.63e-18,58;CL:0000393,1.82e-17,61;CL:0000211,1.82e-17,61;CL:0002539,1.53e-15,10;CL:0000569,8.93e-15,4;CL:0000011,8.93e-15,4;CL:0002593,3.74e-14,2;CL:0002494,1.24e-13,16;CL:0000222,4.33e-10,121;CL:0002592,1.53e-09,3;CL:0002321,1.14e-07,250;CL:0000048,4.95e-07,427;CL:0000723,7.39e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000514;2.19e-18;43!CL:0000011;7.21e-15;4!CL:0000355;2.64e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!4.00e-26!42;UBERON:0003509!4.00e-26!42;UBERON:0004572!4.00e-26!42;UBERON:0004573!4.67e-22!33;UBERON:0004571!4.67e-22!33;UBERON:0004872!1.19e-18!84;UBERON:0000055!1.79e-18!69;UBERON:0001981!5.16e-18!60;UBERON:0007500!5.16e-18!60;UBERON:0004537!5.16e-18!60;UBERON:0006965!5.16e-18!60;UBERON:0002049!6.99e-17!79;UBERON:0007798!6.99e-17!79;UBERON:0004535!3.32e-15!110;UBERON:0001009!1.83e-14!113;UBERON:0003914!4.39e-12!118;UBERON:0000486!1.09e-10!82;UBERON:0001134!1.32e-10!61;UBERON:0002036!1.32e-10!61;UBERON:0003082!1.32e-10!61;UBERON:0004237!2.01e-10!10;UBERON:0004695!2.01e-10!10;UBERON:0002111!2.01e-10!10;UBERON:0004178!2.01e-10!10;UBERON:0002385!4.90e-10!63;UBERON:0001015!4.90e-10!63;UBERON:0000383!4.90e-10!63;UBERON:0003081!8.03e-10!216;UBERON:0003834!1.72e-09!5;UBERON:0001533!1.72e-09!5;UBERON:0000947!4.68e-09!21;UBERON:0010191!4.68e-09!21;UBERON:0002204!9.09e-09!167;UBERON:0004290!2.51e-08!70;UBERON:0000914!5.38e-08!83;UBERON:0002329!5.38e-08!83;UBERON:0003077!5.38e-08!83;UBERON:0003059!5.38e-08!83;UBERON:0007282!5.38e-08!83;UBERON:0009618!5.38e-08!83;UBERON:0007285!5.38e-08!83;UBERON:0000490!8.62e-08!138 | |ontology_enrichment_uberon=UBERON:0001637!4.00e-26!42;UBERON:0003509!4.00e-26!42;UBERON:0004572!4.00e-26!42;UBERON:0004573!4.67e-22!33;UBERON:0004571!4.67e-22!33;UBERON:0004872!1.19e-18!84;UBERON:0000055!1.79e-18!69;UBERON:0001981!5.16e-18!60;UBERON:0007500!5.16e-18!60;UBERON:0004537!5.16e-18!60;UBERON:0006965!5.16e-18!60;UBERON:0002049!6.99e-17!79;UBERON:0007798!6.99e-17!79;UBERON:0004535!3.32e-15!110;UBERON:0001009!1.83e-14!113;UBERON:0003914!4.39e-12!118;UBERON:0000486!1.09e-10!82;UBERON:0001134!1.32e-10!61;UBERON:0002036!1.32e-10!61;UBERON:0003082!1.32e-10!61;UBERON:0004237!2.01e-10!10;UBERON:0004695!2.01e-10!10;UBERON:0002111!2.01e-10!10;UBERON:0004178!2.01e-10!10;UBERON:0002385!4.90e-10!63;UBERON:0001015!4.90e-10!63;UBERON:0000383!4.90e-10!63;UBERON:0003081!8.03e-10!216;UBERON:0003834!1.72e-09!5;UBERON:0001533!1.72e-09!5;UBERON:0000947!4.68e-09!21;UBERON:0010191!4.68e-09!21;UBERON:0002204!9.09e-09!167;UBERON:0004290!2.51e-08!70;UBERON:0000914!5.38e-08!83;UBERON:0002329!5.38e-08!83;UBERON:0003077!5.38e-08!83;UBERON:0003059!5.38e-08!83;UBERON:0007282!5.38e-08!83;UBERON:0009618!5.38e-08!83;UBERON:0007285!5.38e-08!83;UBERON:0000490!8.62e-08!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.29e-27;33!UBERON:0004571;2.29e-27;33!UBERON:0003834;5.97e-21;5!UBERON:0001533;5.97e-21;5!UBERON:0001637;1.40e-18;42!UBERON:0003509;1.40e-18;42!UBERON:0004572;1.40e-18;42!UBERON:0004237;1.23e-15;10!UBERON:0004695;1.23e-15;10!UBERON:0002111;1.23e-15;10!UBERON:0004178;1.23e-15;10!UBERON:0003513;5.09e-15;7!UBERON:0002456;3.50e-14;2!UBERON:0000055;2.14e-11;65!UBERON:0001135;2.33e-10;15!UBERON:0000948;7.44e-10;22!UBERON:0003498;1.40e-09;3!UBERON:0005985;1.40e-09;3!UBERON:0001621;1.40e-09;3!UBERON:0007100;1.32e-08;25!UBERON:0007500;5.29e-08;56!UBERON:0001981;5.29e-08;56!UBERON:0004537;5.29e-08;56!UBERON:0000947;2.48e-07;21!UBERON:0010191;2.48e-07;21!UBERON:0002119;2.51e-07;4!UBERON:0003914;9.32e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,7.21e-30,33;UBERON:0004571,7.21e-30,33;UBERON:0001637,1.24e-26,42;UBERON:0003509,1.24e-26,42;UBERON:0004572,1.24e-26,42;UBERON:0003834,7.73e-21,5;UBERON:0001533,7.73e-21,5;UBERON:0004872,8.29e-21,83;UBERON:0000055,1.74e-20,68;UBERON:0004535,5.54e-19,109;UBERON:0001009,2.30e-18,112;UBERON:0007500,3.75e-18,59;UBERON:0001981,3.75e-18,59;UBERON:0004537,3.75e-18,59;UBERON:0006965,3.75e-18,59;UBERON:0002049,1.93e-17,78;UBERON:0007798,1.93e-17,78;UBERON:0001134,3.87e-17,62;UBERON:0002036,3.87e-17,62;UBERON:0003082,3.87e-17,62;UBERON:0002385,1.62e-16,64;UBERON:0001015,1.62e-16,64;UBERON:0000383,1.62e-16,64;UBERON:0004237,1.53e-15,10;UBERON:0004695,1.53e-15,10;UBERON:0002111,1.53e-15,10;UBERON:0004178,1.53e-15,10;UBERON:0003513,6.11e-15,7;UBERON:0002329,1.30e-14,71;UBERON:0003059,1.30e-14,71;UBERON:0007282,1.30e-14,71;UBERON:0004290,1.30e-14,71;UBERON:0009618,1.30e-14,71;UBERON:0003077,2.27e-14,72;UBERON:0007285,2.27e-14,72;UBERON:0002456,3.74e-14,2;UBERON:0007524,3.90e-14,73;UBERON:0003914,1.09e-13,117;UBERON:0007503,4.74e-13,78;UBERON:0000486,4.25e-12,83;UBERON:0003081,1.80e-10,203;UBERON:0001135,2.68e-10,15;UBERON:0001621,1.53e-09,3;UBERON:0000948,6.54e-09,24;UBERON:0005498,6.54e-09,24;UBERON:0004140,6.54e-09,24;UBERON:0009881,6.54e-09,24;UBERON:0004141,6.54e-09,24;UBERON:0003084,6.54e-09,24;UBERON:0007005,6.54e-09,24;UBERON:0004139,6.54e-09,24;UBERON:0004291,6.54e-09,24;UBERON:0002204,1.82e-08,167;UBERON:0007100,7.36e-08,27;UBERON:0005256,2.32e-07,122;UBERON:0002119,2.72e-07,4;UBERON:0000947,2.74e-07,21;UBERON:0010191,2.74e-07,21;UBERON:0004111,3.08e-07,240;UBERON:0000025,7.08e-07,192 | |||
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|short_description=p1@ENST00000502804 | |short_description=p1@ENST00000502804 | ||
}} | }} |
Latest revision as of 06:46, 30 July 2015
Short description: | p1@ENST00000502804 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000502804_5end |
Coexpression cluster: | C773_Smooth_mesenchymal_Hair_Lymphatic_Preadipocyte_Aortic_anaplastic |
Association with transcript: | -111bp_to_ENST00000502804_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 7.92e-36 | 32 |
smooth muscle cell | 5.99e-26 | 43 |
smooth muscle myoblast | 5.99e-26 | 43 |
smooth muscle cell of the subclavian artery | 7.73e-21 | 5 |
muscle cell | 1.12e-19 | 55 |
muscle precursor cell | 1.63e-18 | 58 |
myoblast | 1.63e-18 | 58 |
multi-potent skeletal muscle stem cell | 1.63e-18 | 58 |
electrically responsive cell | 1.82e-17 | 61 |
electrically active cell | 1.82e-17 | 61 |
aortic smooth muscle cell | 1.53e-15 | 10 |
cardiac mesenchymal cell | 8.93e-15 | 4 |
migratory trunk neural crest cell | 8.93e-15 | 4 |
smooth muscle cell of the internal thoracic artery | 3.74e-14 | 2 |
cardiocyte | 1.24e-13 | 16 |
mesodermal cell | 4.33e-10 | 121 |
smooth muscle cell of the coronary artery | 1.53e-09 | 3 |
embryonic cell | 1.14e-07 | 250 |
multi fate stem cell | 4.95e-07 | 427 |
somatic stem cell | 7.39e-07 | 433 |