FFCP PHASE1:Hg19::chr4:74736251..74736276,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:74736251..74736276,+ | |||
|coexpression_cluster_id=C773 | |coexpression_cluster_id=C773 | ||
|description=CAGE_peak_at_chr4:74736251..74736276,+ | |description=CAGE_peak_at_chr4:74736251..74736276,+ | ||
|id=chr4:74736251..74736276,+ | |id=chr4:74736251..74736276,+ | ||
|ontology_enrichment_celltype=CL:0000359;9.54e-34;32!CL:0000192;1.47e-18;43!CL:0002539;3.25e-14;10!CL:0002595;4.98e-10;5!CL:0002494;7.46e-10;16!CL:0000187;3.88e-09;55!CL:0000393;7.65e-08;61!CL:0000211;7.65e-08;61!CL:0002594;2.44e-07;4 | |ontology_enrichment_celltype=CL:0000359!5.56e-20!32;CL:0000680!1.17e-19!57;CL:0000056!1.17e-19!57;CL:0000355!1.17e-19!57;CL:0000187!3.32e-18!54;CL:0000183!3.40e-17!59;CL:0000192!2.96e-16!42;CL:0000514!2.96e-16!42;CL:0000393!1.13e-15!60;CL:0000211!1.13e-15!60;CL:0000222!3.10e-15!119;CL:0002371!1.60e-13!591;CL:0000220!2.04e-13!246;CL:0002321!4.94e-13!248;CL:0000055!9.10e-12!180;CL:0000144!1.65e-11!625;CL:0000548!9.89e-11!679;CL:0000004!9.89e-11!679;CL:0000255!9.89e-11!679;CL:0000012!2.32e-10!682;CL:0002539!1.06e-09!10;CL:0000048!2.35e-08!430;CL:0000723!2.42e-08!436;CL:0000003!2.64e-08!722;CL:0000034!1.08e-07!444;CL:0002494!3.14e-07!16 | ||
| | |ontology_enrichment_celltype_v019=CL:0000359;9.54e-34;32!CL:0000192;1.47e-18;43!CL:0002539;3.25e-14;10!CL:0002595;4.98e-10;5!CL:0002494;7.46e-10;16!CL:0000187;3.88e-09;55!CL:0000393;7.65e-08;61!CL:0000211;7.65e-08;61!CL:0002594;2.44e-07;4 | ||
|ontology_enrichment_disease=DOID:120;4.37e-09;27!DOID:2394;8.39e-09;14!DOID:193;3.29e-08;29 | |ontology_enrichment_celltype_v019_2=CL:0000359,1.28e-35,32;CL:0000192,7.73e-26,43;CL:0000514,7.73e-26,43;CL:0000680,7.33e-21,58;CL:0000056,7.33e-21,58;CL:0000355,7.33e-21,58;CL:0000187,1.24e-19,55;CL:0000393,8.70e-17,61;CL:0000211,8.70e-17,61;CL:0002539,2.95e-14,10;CL:0000222,5.99e-14,121;CL:0000723,3.01e-11,433;CL:0002321,3.02e-11,250;CL:0000048,3.03e-11,427;CL:0000034,1.30e-10,441;CL:0002595,4.93e-10,5;CL:0002494,8.06e-10,16;CL:0002594,2.24e-07,4 | ||
|ontology_enrichment_uberon=UBERON:0001637;1.37e-20;42!UBERON:0003509;1.37e-20;42!UBERON:0004572;1.37e-20;42!UBERON:0004573;1.16e-19;33!UBERON:0004571;1.16e-19;33!UBERON:0004237;3.25e-14;10!UBERON:0004695;3.25e-14;10!UBERON:0002111;3.25e-14;10!UBERON:0004178;3.25e-14;10!UBERON:0007500;2.03e-11;56!UBERON:0001981;2.03e-11;56!UBERON:0004537;2.03e-11;56!UBERON:0000055;1.74e-10;65!UBERON:0003834;4.98e-10;5!UBERON:0001533;4.98e-10;5!UBERON:0002049;6.20e-10;75!UBERON:0007798;6.20e-10;75!UBERON:0001135;1.06e-08;15!UBERON:0001310;2.44e-07;4!UBERON:0003914;3.75e-07;74!UBERON:0003513;5.95e-07;7!UBERON:0000947;9.26e-07;21!UBERON:0010191;9.26e-07;21 | |ontology_enrichment_development_v019=CL:0000514;1.47e-18;43!CL:0000355;2.12e-10;58 | ||
|ontology_enrichment_disease=DOID:2394!1.07e-07!14;DOID:120!3.49e-07!27;DOID:193!5.06e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:120;4.37e-09;27!DOID:2394;8.39e-09;14!DOID:193;3.29e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:120,4.06e-09,27;DOID:2394,8.11e-09,14;DOID:193,3.07e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0001637!4.52e-23!42;UBERON:0003509!4.52e-23!42;UBERON:0004572!4.52e-23!42;UBERON:0004535!2.68e-20!110;UBERON:0001009!4.64e-19!113;UBERON:0000486!7.25e-19!82;UBERON:0002049!7.32e-19!79;UBERON:0007798!7.32e-19!79;UBERON:0000914!9.21e-19!83;UBERON:0002329!9.21e-19!83;UBERON:0003077!9.21e-19!83;UBERON:0003059!9.21e-19!83;UBERON:0007282!9.21e-19!83;UBERON:0009618!9.21e-19!83;UBERON:0007285!9.21e-19!83;UBERON:0004290!4.25e-18!70;UBERON:0004872!2.97e-17!84;UBERON:0001134!3.36e-17!61;UBERON:0002036!3.36e-17!61;UBERON:0003082!3.36e-17!61;UBERON:0004573!5.43e-17!33;UBERON:0004571!5.43e-17!33;UBERON:0002385!9.35e-17!63;UBERON:0001015!9.35e-17!63;UBERON:0000383!9.35e-17!63;UBERON:0000055!1.90e-16!69;UBERON:0001981!8.51e-16!60;UBERON:0007500!8.51e-16!60;UBERON:0004537!8.51e-16!60;UBERON:0006965!8.51e-16!60;UBERON:0002204!1.16e-13!167;UBERON:0000926!3.90e-12!448;UBERON:0004120!3.90e-12!448;UBERON:0006603!3.90e-12!448;UBERON:0000490!5.51e-12!138;UBERON:0005256!1.33e-11!143;UBERON:0003081!1.57e-11!216;UBERON:0003914!2.43e-11!118;UBERON:0000467!6.66e-10!625;UBERON:0000480!8.74e-10!626;UBERON:0004237!1.06e-09!10;UBERON:0004695!1.06e-09!10;UBERON:0002111!1.06e-09!10;UBERON:0004178!1.06e-09!10;UBERON:0001135!3.49e-09!15;UBERON:0000923!1.16e-08!604;UBERON:0005291!1.16e-08!604;UBERON:0006598!1.16e-08!604;UBERON:0002532!1.16e-08!604;UBERON:0000468!1.24e-08!659;UBERON:0002050!1.49e-08!605;UBERON:0005423!1.49e-08!605;UBERON:0000922!2.43e-08!612;UBERON:0000947!1.64e-07!21;UBERON:0010191!1.64e-07!21;UBERON:0002100!4.61e-07!216;UBERON:0003104!5.06e-07!238;UBERON:0009142!5.06e-07!238;UBERON:0000477!5.41e-07!286;UBERON:0000119!6.16e-07!312;UBERON:0000483!9.83e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.37e-20;42!UBERON:0003509;1.37e-20;42!UBERON:0004572;1.37e-20;42!UBERON:0004573;1.16e-19;33!UBERON:0004571;1.16e-19;33!UBERON:0004237;3.25e-14;10!UBERON:0004695;3.25e-14;10!UBERON:0002111;3.25e-14;10!UBERON:0004178;3.25e-14;10!UBERON:0007500;2.03e-11;56!UBERON:0001981;2.03e-11;56!UBERON:0004537;2.03e-11;56!UBERON:0000055;1.74e-10;65!UBERON:0003834;4.98e-10;5!UBERON:0001533;4.98e-10;5!UBERON:0002049;6.20e-10;75!UBERON:0007798;6.20e-10;75!UBERON:0001135;1.06e-08;15!UBERON:0001310;2.44e-07;4!UBERON:0003914;3.75e-07;74!UBERON:0003513;5.95e-07;7!UBERON:0000947;9.26e-07;21!UBERON:0010191;9.26e-07;21 | |||
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| ||
|short_description=p@chr4:74736251..74736276,+ | |short_description=p@chr4:74736251..74736276,+ | ||
}} | }} |
Latest revision as of 06:45, 30 July 2015
Short description: | p@chr4:74736251..74736276, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:74736251..74736276, + |
Coexpression cluster: | C773_Smooth_mesenchymal_Hair_Lymphatic_Preadipocyte_Aortic_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.28e-35 | 32 |
smooth muscle cell | 7.73e-26 | 43 |
smooth muscle myoblast | 7.73e-26 | 43 |
muscle precursor cell | 7.33e-21 | 58 |
myoblast | 7.33e-21 | 58 |
multi-potent skeletal muscle stem cell | 7.33e-21 | 58 |
muscle cell | 1.24e-19 | 55 |
electrically responsive cell | 8.70e-17 | 61 |
electrically active cell | 8.70e-17 | 61 |
aortic smooth muscle cell | 2.95e-14 | 10 |
mesodermal cell | 5.99e-14 | 121 |
somatic stem cell | 3.01e-11 | 433 |
embryonic cell | 3.02e-11 | 250 |
multi fate stem cell | 3.03e-11 | 427 |
stem cell | 1.30e-10 | 441 |
smooth muscle cell of the subclavian artery | 4.93e-10 | 5 |
cardiocyte | 8.06e-10 | 16 |
smooth muscle cell of the umbilical artery | 2.24e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 4.06e-09 | 27 |
ovarian cancer | 8.11e-09 | 14 |
reproductive organ cancer | 3.07e-08 | 29 |