FFCP PHASE1:Hg19::chr4:74703963..74703975,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:74703963..74703975,+ | |||
|coexpression_cluster_id=C1524 | |coexpression_cluster_id=C1524 | ||
|description=CAGE_peak_at_chr4:74703963..74703975,+ | |description=CAGE_peak_at_chr4:74703963..74703975,+ | ||
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|ontology_enrichment_celltype=CL:0000359!2.32e-34!32;CL:0000680!1.55e-24!57;CL:0000056!1.55e-24!57;CL:0000355!1.55e-24!57;CL:0000187!1.82e-24!54;CL:0000192!1.88e-24!42;CL:0000514!1.88e-24!42;CL:0000393!7.15e-23!60;CL:0000211!7.15e-23!60;CL:0000183!1.07e-21!59;CL:0000055!3.43e-19!180;CL:0002539!1.32e-18!10;CL:0000222!4.61e-15!119;CL:0002595!1.33e-12!5;CL:0002494!1.59e-10!16;CL:0000220!6.56e-10!246;CL:0002321!9.89e-10!248;CL:0000048!2.55e-08!430;CL:0002592!2.84e-08!3;CL:0000723!5.58e-08!436;CL:0000034!1.52e-07!444;CL:0000144!1.99e-07!625;CL:0002371!2.01e-07!591;CL:0002582!3.41e-07!3 | |ontology_enrichment_celltype=CL:0000359!2.32e-34!32;CL:0000680!1.55e-24!57;CL:0000056!1.55e-24!57;CL:0000355!1.55e-24!57;CL:0000187!1.82e-24!54;CL:0000192!1.88e-24!42;CL:0000514!1.88e-24!42;CL:0000393!7.15e-23!60;CL:0000211!7.15e-23!60;CL:0000183!1.07e-21!59;CL:0000055!3.43e-19!180;CL:0002539!1.32e-18!10;CL:0000222!4.61e-15!119;CL:0002595!1.33e-12!5;CL:0002494!1.59e-10!16;CL:0000220!6.56e-10!246;CL:0002321!9.89e-10!248;CL:0000048!2.55e-08!430;CL:0002592!2.84e-08!3;CL:0000723!5.58e-08!436;CL:0000034!1.52e-07!444;CL:0000144!1.99e-07!625;CL:0002371!2.01e-07!591;CL:0002582!3.41e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.61e-59;32!CL:0000192;9.88e-34;43!CL:0002539;1.85e-31;10!CL:0000187;4.62e-17;55!CL:0002595;5.00e-17;5!CL:0002592;6.02e-16;3!CL:0002494;1.52e-14;16!CL:0000393;2.78e-14;61!CL:0000211;2.78e-14;61!CL:0002593;1.91e-11;2!CL:0002589;2.30e-10;2!CL:0002596;2.30e-10;2!CL:0000153;3.49e-09;9!CL:0000447;3.49e-09;9!CL:0000214;1.18e-07;3 | |ontology_enrichment_celltype_v019=CL:0000359;1.61e-59;32!CL:0000192;9.88e-34;43!CL:0002539;1.85e-31;10!CL:0000187;4.62e-17;55!CL:0002595;5.00e-17;5!CL:0002592;6.02e-16;3!CL:0002494;1.52e-14;16!CL:0000393;2.78e-14;61!CL:0000211;2.78e-14;61!CL:0002593;1.91e-11;2!CL:0002589;2.30e-10;2!CL:0002596;2.30e-10;2!CL:0000153;3.49e-09;9!CL:0000447;3.49e-09;9!CL:0000214;1.18e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,7.84e-64,32;CL:0000192,2.91e-46,43;CL:0000514,2.91e-46,43;CL:0000187,4.16e-35,55;CL:0000680,4.86e-33,58;CL:0000056,4.86e-33,58;CL:0000355,4.86e-33,58;CL:0002539,2.55e-31,10;CL:0000393,3.55e-31,61;CL:0000211,3.55e-31,61;CL:0000222,3.18e-18,121;CL:0002595,5.22e-17,5;CL:0002592,5.73e-16,3;CL:0002494,1.69e-14,16;CL:0002593,2.01e-11,2;CL:0002589,1.49e-10,2;CL:0002596,3.23e-10,2;CL:0000048,2.26e-09,427;CL:0000153,3.08e-09,9;CL:0000447,3.08e-09,9;CL:0000723,3.89e-09,433;CL:0000034,7.84e-09,441;CL:0002321,1.91e-08,250;CL:0000214,9.99e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000514;9.88e-34;43!CL:0000355;2.02e-16;58 | |ontology_enrichment_development_v019=CL:0000514;9.88e-34;43!CL:0000355;2.02e-16;58 | ||
|ontology_enrichment_disease=DOID:2394!1.22e-14!14 | |ontology_enrichment_disease=DOID:2394!1.22e-14!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;5.67e-12;14 | |ontology_enrichment_disease_v019=DOID:2394;5.67e-12;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,5.24e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0004573!3.02e-27!33;UBERON:0004571!3.02e-27!33;UBERON:0001637!8.38e-27!42;UBERON:0003509!8.38e-27!42;UBERON:0004572!8.38e-27!42;UBERON:0001134!2.27e-22!61;UBERON:0002036!2.27e-22!61;UBERON:0003082!2.27e-22!61;UBERON:0002385!2.15e-21!63;UBERON:0001015!2.15e-21!63;UBERON:0000383!2.15e-21!63;UBERON:0004872!3.63e-20!84;UBERON:0002049!1.20e-19!79;UBERON:0007798!1.20e-19!79;UBERON:0001009!5.45e-19!113;UBERON:0000486!1.18e-18!82;UBERON:0004237!1.32e-18!10;UBERON:0004695!1.32e-18!10;UBERON:0002111!1.32e-18!10;UBERON:0004178!1.32e-18!10;UBERON:0004535!1.36e-18!110;UBERON:0004290!2.00e-18!70;UBERON:0001981!3.32e-18!60;UBERON:0007500!3.32e-18!60;UBERON:0004537!3.32e-18!60;UBERON:0006965!3.32e-18!60;UBERON:0000055!1.20e-17!69;UBERON:0000914!1.13e-16!83;UBERON:0002329!1.13e-16!83;UBERON:0003077!1.13e-16!83;UBERON:0003059!1.13e-16!83;UBERON:0007282!1.13e-16!83;UBERON:0009618!1.13e-16!83;UBERON:0007285!1.13e-16!83;UBERON:0003834!1.33e-12!5;UBERON:0001533!1.33e-12!5;UBERON:0003914!1.41e-12!118;UBERON:0001135!1.07e-11!15;UBERON:0005256!9.34e-10!143;UBERON:0000490!5.12e-09!138;UBERON:0001621!2.84e-08!3;UBERON:0007100!3.87e-08!27;UBERON:0000992!6.50e-08!13;UBERON:0000948!6.77e-08!24;UBERON:0005498!6.77e-08!24;UBERON:0004140!6.77e-08!24;UBERON:0009881!6.77e-08!24;UBERON:0004141!6.77e-08!24;UBERON:0003084!6.77e-08!24;UBERON:0007005!6.77e-08!24;UBERON:0004139!6.77e-08!24;UBERON:0004291!6.77e-08!24;UBERON:0000947!8.88e-08!21;UBERON:0010191!8.88e-08!21;UBERON:0002118!9.71e-08!5;UBERON:0004532!9.71e-08!5;UBERON:0003513!1.16e-07!8 | |ontology_enrichment_uberon=UBERON:0004573!3.02e-27!33;UBERON:0004571!3.02e-27!33;UBERON:0001637!8.38e-27!42;UBERON:0003509!8.38e-27!42;UBERON:0004572!8.38e-27!42;UBERON:0001134!2.27e-22!61;UBERON:0002036!2.27e-22!61;UBERON:0003082!2.27e-22!61;UBERON:0002385!2.15e-21!63;UBERON:0001015!2.15e-21!63;UBERON:0000383!2.15e-21!63;UBERON:0004872!3.63e-20!84;UBERON:0002049!1.20e-19!79;UBERON:0007798!1.20e-19!79;UBERON:0001009!5.45e-19!113;UBERON:0000486!1.18e-18!82;UBERON:0004237!1.32e-18!10;UBERON:0004695!1.32e-18!10;UBERON:0002111!1.32e-18!10;UBERON:0004178!1.32e-18!10;UBERON:0004535!1.36e-18!110;UBERON:0004290!2.00e-18!70;UBERON:0001981!3.32e-18!60;UBERON:0007500!3.32e-18!60;UBERON:0004537!3.32e-18!60;UBERON:0006965!3.32e-18!60;UBERON:0000055!1.20e-17!69;UBERON:0000914!1.13e-16!83;UBERON:0002329!1.13e-16!83;UBERON:0003077!1.13e-16!83;UBERON:0003059!1.13e-16!83;UBERON:0007282!1.13e-16!83;UBERON:0009618!1.13e-16!83;UBERON:0007285!1.13e-16!83;UBERON:0003834!1.33e-12!5;UBERON:0001533!1.33e-12!5;UBERON:0003914!1.41e-12!118;UBERON:0001135!1.07e-11!15;UBERON:0005256!9.34e-10!143;UBERON:0000490!5.12e-09!138;UBERON:0001621!2.84e-08!3;UBERON:0007100!3.87e-08!27;UBERON:0000992!6.50e-08!13;UBERON:0000948!6.77e-08!24;UBERON:0005498!6.77e-08!24;UBERON:0004140!6.77e-08!24;UBERON:0009881!6.77e-08!24;UBERON:0004141!6.77e-08!24;UBERON:0003084!6.77e-08!24;UBERON:0007005!6.77e-08!24;UBERON:0004139!6.77e-08!24;UBERON:0004291!6.77e-08!24;UBERON:0000947!8.88e-08!21;UBERON:0010191!8.88e-08!21;UBERON:0002118!9.71e-08!5;UBERON:0004532!9.71e-08!5;UBERON:0003513!1.16e-07!8 | ||
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|short_description=p@chr4:74703963..74703975,+ | |short_description=p@chr4:74703963..74703975,+ | ||
}} | }} |
Latest revision as of 06:44, 30 July 2015
Short description: | p@chr4:74703963..74703975, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:74703963..74703975, + |
Coexpression cluster: | C1524_Smooth_mesenchymal_Chondrocyte_Aortic_Synoviocyte_Preadipocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 7.84e-64 | 32 |
smooth muscle cell | 2.91e-46 | 43 |
smooth muscle myoblast | 2.91e-46 | 43 |
muscle cell | 4.16e-35 | 55 |
muscle precursor cell | 4.86e-33 | 58 |
myoblast | 4.86e-33 | 58 |
multi-potent skeletal muscle stem cell | 4.86e-33 | 58 |
aortic smooth muscle cell | 2.55e-31 | 10 |
electrically responsive cell | 3.55e-31 | 61 |
electrically active cell | 3.55e-31 | 61 |
mesodermal cell | 3.18e-18 | 121 |
smooth muscle cell of the subclavian artery | 5.22e-17 | 5 |
smooth muscle cell of the coronary artery | 5.73e-16 | 3 |
cardiocyte | 1.69e-14 | 16 |
smooth muscle cell of the internal thoracic artery | 2.01e-11 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 1.49e-10 | 2 |
smooth muscle cell of the carotid artery | 3.23e-10 | 2 |
multi fate stem cell | 2.26e-09 | 427 |
GAG secreting cell | 3.08e-09 | 9 |
carbohydrate secreting cell | 3.08e-09 | 9 |
somatic stem cell | 3.89e-09 | 433 |
stem cell | 7.84e-09 | 441 |
embryonic cell | 1.91e-08 | 250 |
synovial cell | 9.99e-08 | 3 |
Ontology term | p-value | n |
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