FFCP PHASE1:Hg19::chr4:71222797..71222807,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:71222797..71222807,+ | |||
|coexpression_cluster_id=C86 | |coexpression_cluster_id=C86 | ||
|description=CAGE_peak_at_chr4:71222797..71222807,+ | |description=CAGE_peak_at_chr4:71222797..71222807,+ | ||
Latest revision as of 06:19, 30 July 2015
| Short description: | p@chr4:71222797..71222807, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr4:71222797..71222807, + |
| Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr4:71222797..71222807+ |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell of large intestine | 1.55e-98 | 2 |
| intestinal epithelial cell | 3.10e-50 | 4 |
| epithelial cell of alimentary canal | 2.29e-11 | 20 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| rectum | 3.10e-50 | 4 |
| intestinal mucosa | 3.10e-50 | 4 |
| wall of intestine | 3.10e-50 | 4 |
| gastrointestinal system mucosa | 3.10e-50 | 4 |
| gastrointestinal system epithelium | 3.10e-50 | 4 |
| intestinal epithelium | 3.10e-50 | 4 |
| lower digestive tract | 1.48e-40 | 5 |
| epithelium of mucosa | 5.22e-26 | 8 |
| colon | 2.62e-23 | 9 |
| simple columnar epithelium | 2.62e-23 | 9 |
Showing 1 to 10 of 15 entries
| Ontology term | p-value | n |
|---|---|---|
| gastrointestinal system cancer | 1.43e-15 | 14 |
| adenocarcinoma | 2.15e-09 | 25 |
Showing 1 to 2 of 2 entries
