FFCP PHASE1:Hg19::chr4:55527639..55527644,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:55527639..55527644,- | |||
|coexpression_cluster_id=C530 | |||
|description=CAGE_peak_at_chr4:55527639..55527644,- | |||
|id=chr4:55527639..55527644,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000243;4.46e-07;15!CL:0000125;4.46e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,4.46e-07,15;CL:0000125,4.46e-07,15;CL:0000030,4.46e-07,15;CL:0000339,4.46e-07,15;CL:0000333,4.79e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0007123;3.04e-11;5!UBERON:0006238;1.19e-10;10!CL:0000339;4.46e-07;15 | |||
|ontology_enrichment_disease=DOID:162!1.51e-10!235;DOID:14566!4.91e-10!239 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.08e-14;8!DOID:3112;3.08e-14;1!DOID:3093;8.26e-10;11!DOID:154;1.12e-07;2!DOID:4236;1.12e-07;2!DOID:1909;1.87e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.01e-14,8;DOID:3112,3.08e-14,1;DOID:3093,8.26e-10,11;DOID:154,1.12e-07,2;DOID:4236,1.12e-07,2;DOID:1909,1.45e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.15e-07!45;UBERON:0002416!1.15e-07!45;UBERON:0002097!5.48e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;3.04e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,3.04e-11,5;UBERON:0004117,3.04e-11,5;UBERON:0007689,3.04e-11,5;UBERON:0007123,3.04e-11,5;UBERON:0003091,3.04e-11,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0.293600439334847,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0.576175924479999,0.234321431833797,0.312160076830321,0,0,0.117434498643765,0.323745888736263,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.538168907066586,0,0,0,0.206105058476878,0,0,0.337552664482532,0,0.504867548488229,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0.207328115540772,0,0,0.126995788584338,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.22001485746285,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0,0,0,0.275673144969061,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.45040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0.425846237690326,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0.166211681900156,0.225595660617181,0,0,3.98482838720789,2.06617552674492,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.300646838828985,0,0,0.330991955875499,0,0,0,0,0,0,0.783532859223623,0,0,0,0,0,0,0,0,1.91858694505451,0.19871461170299,0,0,0.160317640503067,0,0.19980960958213,0,0.114536596165916,0,0,0,0,1.76675467895698,1.569042694685,1.4279750469085,0,0,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0.422401346077626,0,0,0,0,0,0,0,0,0,1.72394293573612,0,0.453248366080503,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.909894705249887,1.99825733481477,0,0,0,0,0.233713309847224,0,0,0.251567901752575,0.889811221596536,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0.406870733204662,0.363697318405119,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0.358177682162975,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,3.93131818615695,0,0,0,0,0,0,0.368211900503681,0,0,0,0,1.10086159299127,0,0.33946505990805,0,0.247871528518004,0,0.318004350653419,0,0,0,1.531227386766,0,0,0,0,0,0,0,0,0,0,0.550285795565037,0.577628330751691,0.381382095467167,0,0,0,0.20170506870352,0,0,12.4466657307674,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0.230467975111559,0,0,0,0.236387681767936,0.222462803784138,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,0,0,4.26101077806331,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:55527639..55527644,- | |||
}} |
Latest revision as of 05:41, 30 July 2015
Short description: | p@chr4:55527639..55527644, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:55527639..55527644, - |
Coexpression cluster: | C530_papillary_salivary_skin_Smooth_leiomyoma_lung_Keratinocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 4.46e-07 | 15 |
glial cell | 4.46e-07 | 15 |
glioblast | 4.46e-07 | 15 |
glioblast (sensu Vertebrata) | 4.46e-07 | 15 |
migratory neural crest cell | 4.79e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 3.04e-11 | 5 |
pharyngeal pouch | 3.04e-11 | 5 |
thyroid diverticulum | 3.04e-11 | 5 |
pharyngeal pouch 2 | 3.04e-11 | 5 |
thyroid primordium | 3.04e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.01e-14 | 8 |
papillary adenocarcinoma | 3.08e-14 | 1 |
nervous system cancer | 8.26e-10 | 11 |
mixed cell type cancer | 1.12e-07 | 2 |
carcinosarcoma | 1.12e-07 | 2 |
melanoma | 1.45e-07 | 2 |