FFCP PHASE1:Hg19::chr4:43341753..43341762,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:43341753..43341762,+ | |||
|coexpression_cluster_id=C1401 | |coexpression_cluster_id=C1401 | ||
|description=CAGE_peak_at_chr4:43341753..43341762,+ | |description=CAGE_peak_at_chr4:43341753..43341762,+ | ||
|id=chr4:43341753..43341762,+ | |id=chr4:43341753..43341762,+ | ||
|ontology_enrichment_celltype=CL:0000188!8.42e-15!9;CL:0000515!1.08e-11!4;CL:0002622!3.58e-09!3;CL:0002570!6.14e-09!8;CL:0000680!1.49e-07!57;CL:0000056!1.49e-07!57;CL:0000355!1.49e-07!57;CL:1000306!7.25e-07!4;CL:0002547!7.25e-07!4 | |ontology_enrichment_celltype=CL:0000188!8.42e-15!9;CL:0000515!1.08e-11!4;CL:0002622!3.58e-09!3;CL:0002570!6.14e-09!8;CL:0000680!1.49e-07!57;CL:0000056!1.49e-07!57;CL:0000355!1.49e-07!57;CL:1000306!7.25e-07!4;CL:0002547!7.25e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002601;1.06e-23;1!CL:0000228;3.67e-23;1!CL:0002372;3.67e-23;1!CL:0000680;1.69e-13;7!CL:0000188;1.02e-10;9!CL:0002582;1.26e-08;3!CL:0000594;1.26e-08;3!CL:1000306;7.07e-07;4!CL:0002547;7.07e-07;4!CL:0000056;8.85e-07;4!CL:0000737;8.85e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002601,1.07e-23,1;CL:0000228,3.28e-23,1;CL:0002372,3.28e-23,1;CL:0000188,1.12e-10,9;CL:0002582,1.40e-08,3;CL:0000594,1.51e-08,3;CL:1000306,6.87e-07,4;CL:0002547,6.87e-07,4;CL:0000737,8.61e-07,4;CL:0000515,8.61e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;8.85e-07;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.26e-08;3!DOID:127;1.26e-08;3!DOID:0060072;8.85e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.04e-08,3;DOID:127,1.04e-08,3;DOID:0060072,7.70e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004290!2.30e-07!70;UBERON:0000486!2.33e-07!82;UBERON:0000914!2.36e-07!83;UBERON:0002329!2.36e-07!83;UBERON:0003077!2.36e-07!83;UBERON:0003059!2.36e-07!83;UBERON:0007282!2.36e-07!83;UBERON:0009618!2.36e-07!83;UBERON:0007285!2.36e-07!83;UBERON:0001013!6.51e-07!14;UBERON:0000415!7.25e-07!4;UBERON:0007240!7.25e-07!4;UBERON:0005742!7.25e-07!4;UBERON:0005734!7.25e-07!4;UBERON:0004664!7.25e-07!4;UBERON:0004663!7.25e-07!4;UBERON:0001134!7.75e-07!61;UBERON:0002036!7.75e-07!61;UBERON:0003082!7.75e-07!61 | |ontology_enrichment_uberon=UBERON:0004290!2.30e-07!70;UBERON:0000486!2.33e-07!82;UBERON:0000914!2.36e-07!83;UBERON:0002329!2.36e-07!83;UBERON:0003077!2.36e-07!83;UBERON:0003059!2.36e-07!83;UBERON:0007282!2.36e-07!83;UBERON:0009618!2.36e-07!83;UBERON:0007285!2.36e-07!83;UBERON:0001013!6.51e-07!14;UBERON:0000415!7.25e-07!4;UBERON:0007240!7.25e-07!4;UBERON:0005742!7.25e-07!4;UBERON:0005734!7.25e-07!4;UBERON:0004664!7.25e-07!4;UBERON:0004663!7.25e-07!4;UBERON:0001134!7.75e-07!61;UBERON:0002036!7.75e-07!61;UBERON:0003082!7.75e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;7.07e-07;4!UBERON:0000415;7.07e-07;4!UBERON:0007240;7.07e-07;4!UBERON:0005742;7.07e-07;4!UBERON:0005734;7.07e-07;4!UBERON:0004664;7.07e-07;4!UBERON:0004663;7.07e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,6.87e-07,4;UBERON:0007240,6.87e-07,4;UBERON:0005742,6.87e-07,4;UBERON:0005734,6.87e-07,4;UBERON:0004664,6.87e-07,4;UBERON:0004663,6.87e-07,4 | |||
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|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,3.70745706277013,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0.140450806702248,0.61246251376468,0,0,0,0,0.910161361938026,0,0,0.125118519871964,0.831192346452549,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.337552664482532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0.845302752556,0,0,0,0,0,0,0,0,0.977208552881205,0,0,0.904318131178758,0,0.199945982364114,0,0,0,0.239624855491583,0,1.42636905040718,0.144781306667579,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0.246381468041427,1.03850885836724,0,0,0,0,0.459257792658427,0.364182336013434,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0.924291702687866,0.15350367472613,0.413509717453592,0.214840489736547,0,1.02271952899321,0,0,0,3.06270509987002,0,0,0,0,0,0,0.869932992075073,0.18532421910392,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.74046021734136,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587954384486266,0.69647365264322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,1.95952416065645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,1.10961172300523,0.189403005275089,0,0,0,0.151230923763239,0.15543720058278,0.295710299979268,0.159296767163702,0,0,0.414706207840855,0,0,0.150257608997218,0.380805212168795,0.406870733204662,0.727394636810238,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:43341753..43341762,+ | |short_description=p@chr4:43341753..43341762,+ | ||
}} | }} |
Latest revision as of 05:20, 30 July 2015
Short description: | p@chr4:43341753..43341762, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:43341753..43341762, + |
Coexpression cluster: | C1401_Smooth_Fibroblast_leiomyoma_malignant_Small_Skeletal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterine smooth muscle cell | 1.07e-23 | 1 |
multinucleate cell | 3.28e-23 | 1 |
myotube | 3.28e-23 | 1 |
cell of skeletal muscle | 1.12e-10 | 9 |
visceral preadipocyte | 1.40e-08 | 3 |
skeletal muscle satellite cell | 1.51e-08 | 3 |
fibroblast of tunica adventitia of artery | 6.87e-07 | 4 |
fibroblast of the aortic adventitia | 6.87e-07 | 4 |
striated muscle cell | 8.61e-07 | 4 |
skeletal muscle myoblast | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
artery wall | 6.87e-07 | 4 |
tunica adventitia of artery | 6.87e-07 | 4 |
adventitia | 6.87e-07 | 4 |
tunica adventitia of blood vessel | 6.87e-07 | 4 |
aorta tunica adventitia | 6.87e-07 | 4 |
aorta wall | 6.87e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.04e-08 | 3 |
leiomyoma | 1.04e-08 | 3 |
benign neoplasm | 7.70e-07 | 4 |