FFCP PHASE1:Hg19::chr4:43341736..43341745,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:43341736..43341745,+ | |||
|coexpression_cluster_id=C1401 | |coexpression_cluster_id=C1401 | ||
|description=CAGE_peak_at_chr4:43341736..43341745,+ | |description=CAGE_peak_at_chr4:43341736..43341745,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002622!2.60e-11!3;CL:0000188!6.55e-07!9 | |ontology_enrichment_celltype=CL:0002622!2.60e-11!3;CL:0000188!6.55e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002601;1.84e-34;1!CL:1000306;1.38e-09;4!CL:0002547;1.38e-09;4 | |ontology_enrichment_celltype_v019=CL:0002601;1.84e-34;1!CL:1000306;1.38e-09;4!CL:0002547;1.38e-09;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002601,1.84e-34,1;CL:1000306,1.32e-09,4;CL:0002547,1.32e-09,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0060072!2.44e-09!4 | |ontology_enrichment_disease=DOID:0060072!2.44e-09!4 | ||
|ontology_enrichment_disease_v019=DOID:0060084;2.45e-12;3!DOID:127;2.45e-12;3!DOID:0060072;1.38e-09;4 | |ontology_enrichment_disease_v019=DOID:0060084;2.45e-12;3!DOID:127;2.45e-12;3!DOID:0060072;1.38e-09;4 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.59e-12,3;DOID:127,2.59e-12,3;DOID:0060072,1.44e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0003102!5.81e-09!95;UBERON:0000162!1.96e-08!14;UBERON:0001353!1.96e-08!14;UBERON:0000163!1.96e-08!14;UBERON:0006866!1.96e-08!14;UBERON:0000164!1.96e-08!14;UBERON:0000931!1.96e-08!14;UBERON:0000161!2.84e-08!35;UBERON:0002367!7.44e-08!11;UBERON:0010147!7.44e-08!11;UBERON:0009846!7.44e-08!11;UBERON:0003353!7.44e-08!11;UBERON:0004902!7.44e-08!11;UBERON:0003820!7.44e-08!11;UBERON:0009847!7.44e-08!11;UBERON:0004122!7.85e-08!15;UBERON:0001828!1.46e-07!8;UBERON:0003937!3.56e-07!12;UBERON:0005399!3.56e-07!12 | |ontology_enrichment_uberon=UBERON:0003102!5.81e-09!95;UBERON:0000162!1.96e-08!14;UBERON:0001353!1.96e-08!14;UBERON:0000163!1.96e-08!14;UBERON:0006866!1.96e-08!14;UBERON:0000164!1.96e-08!14;UBERON:0000931!1.96e-08!14;UBERON:0000161!2.84e-08!35;UBERON:0002367!7.44e-08!11;UBERON:0010147!7.44e-08!11;UBERON:0009846!7.44e-08!11;UBERON:0003353!7.44e-08!11;UBERON:0004902!7.44e-08!11;UBERON:0003820!7.44e-08!11;UBERON:0009847!7.44e-08!11;UBERON:0004122!7.85e-08!15;UBERON:0001828!1.46e-07!8;UBERON:0003937!3.56e-07!12;UBERON:0005399!3.56e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.38e-09;4!UBERON:0000415;1.38e-09;4!UBERON:0007240;1.38e-09;4!UBERON:0005742;1.38e-09;4!UBERON:0005734;1.38e-09;4!UBERON:0004664;1.38e-09;4!UBERON:0004663;1.38e-09;4!UBERON:0000995;8.07e-09;17!UBERON:0003975;2.21e-08;18!UBERON:0004175;2.56e-07;21 | |ontology_enrichment_uberon_v019=UBERON:0004797;1.38e-09;4!UBERON:0000415;1.38e-09;4!UBERON:0007240;1.38e-09;4!UBERON:0005742;1.38e-09;4!UBERON:0005734;1.38e-09;4!UBERON:0004664;1.38e-09;4!UBERON:0004663;1.38e-09;4!UBERON:0000995;8.07e-09;17!UBERON:0003975;2.21e-08;18!UBERON:0004175;2.56e-07;21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,1.32e-09,4;UBERON:0007240,1.32e-09,4;UBERON:0005742,1.32e-09,4;UBERON:0005734,1.32e-09,4;UBERON:0004664,1.32e-09,4;UBERON:0004663,1.32e-09,4;UBERON:0000995,2.60e-07,21;UBERON:0005795,5.09e-07,22;UBERON:0003975,5.09e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51577443545116,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0.204154171254893,0.368502951935304,0,0,0,0,0,0,0.125118519871964,0.554128230968366,0,0,0,0,0,0,0,0.600182192168805,0.206105058476878,0,0,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0.519254429183621,0,0,0.200506470303285,0,0.114814448164607,0.546273504020151,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,1.23238893691716,0,0.551346289938122,0.214840489736547,0,0,0,0,0,3.44554323735377,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,7.80474340955315,0.211107635297664,0,0,0,0.384888450902048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.261177619741208,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,2.17199840701485,0,0.979762080328227,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0.477890301491107,0,0,0,0.265841714557995,0,0,0.380805212168795,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51577443545116,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0.204154171254893,0.368502951935304,0,0,0,0,0,0,0.125118519871964,0.554128230968366,0,0,0,0,0,0,0,0.600182192168805,0.206105058476878,0,0,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0.519254429183621,0,0,0.200506470303285,0,0.114814448164607,0.546273504020151,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,1.23238893691716,0,0.551346289938122,0.214840489736547,0,0,0,0,0,3.44554323735377,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,7.80474340955315,0.211107635297664,0,0,0,0.384888450902048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.261177619741208,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,2.17199840701485,0,0.979762080328227,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.233713309847224,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0.477890301491107,0,0,0,0.265841714557995,0,0,0.380805212168795,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:43341736..43341745,+ | |short_description=p@chr4:43341736..43341745,+ | ||
}} | }} |
Latest revision as of 05:20, 30 July 2015
Short description: | p@chr4:43341736..43341745, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:43341736..43341745, + |
Coexpression cluster: | C1401_Smooth_Fibroblast_leiomyoma_malignant_Small_Skeletal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterine smooth muscle cell | 1.84e-34 | 1 |
fibroblast of tunica adventitia of artery | 1.32e-09 | 4 |
fibroblast of the aortic adventitia | 1.32e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
artery wall | 1.32e-09 | 4 |
tunica adventitia of artery | 1.32e-09 | 4 |
adventitia | 1.32e-09 | 4 |
tunica adventitia of blood vessel | 1.32e-09 | 4 |
aorta tunica adventitia | 1.32e-09 | 4 |
aorta wall | 1.32e-09 | 4 |
uterus | 2.60e-07 | 21 |
embryonic uterus | 5.09e-07 | 22 |
internal female genitalia | 5.09e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.59e-12 | 3 |
leiomyoma | 2.59e-12 | 3 |
benign neoplasm | 1.44e-09 | 4 |