FFCP PHASE1:Hg19::chr4:43341736..43341745,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:43341736..43341745,+ | |||
|coexpression_cluster_id=C1401 | |||
|description=CAGE_peak_at_chr4:43341736..43341745,+ | |description=CAGE_peak_at_chr4:43341736..43341745,+ | ||
|id=chr4:43341736..43341745,+ | |id=chr4:43341736..43341745,+ | ||
|ontology_enrichment_celltype=CL:0002622!2.60e-11!3;CL:0000188!6.55e-07!9 | |ontology_enrichment_celltype=CL:0002622!2.60e-11!3;CL:0000188!6.55e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002601;1.84e-34;1!CL:1000306;1.38e-09;4!CL:0002547;1.38e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002601,1.84e-34,1;CL:1000306,1.32e-09,4;CL:0002547,1.32e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060072!2.44e-09!4 | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.45e-12;3!DOID:127;2.45e-12;3!DOID:0060072;1.38e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.59e-12,3;DOID:127,2.59e-12,3;DOID:0060072,1.44e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0003102!5.81e-09!95;UBERON:0000162!1.96e-08!14;UBERON:0001353!1.96e-08!14;UBERON:0000163!1.96e-08!14;UBERON:0006866!1.96e-08!14;UBERON:0000164!1.96e-08!14;UBERON:0000931!1.96e-08!14;UBERON:0000161!2.84e-08!35;UBERON:0002367!7.44e-08!11;UBERON:0010147!7.44e-08!11;UBERON:0009846!7.44e-08!11;UBERON:0003353!7.44e-08!11;UBERON:0004902!7.44e-08!11;UBERON:0003820!7.44e-08!11;UBERON:0009847!7.44e-08!11;UBERON:0004122!7.85e-08!15;UBERON:0001828!1.46e-07!8;UBERON:0003937!3.56e-07!12;UBERON:0005399!3.56e-07!12 | |ontology_enrichment_uberon=UBERON:0003102!5.81e-09!95;UBERON:0000162!1.96e-08!14;UBERON:0001353!1.96e-08!14;UBERON:0000163!1.96e-08!14;UBERON:0006866!1.96e-08!14;UBERON:0000164!1.96e-08!14;UBERON:0000931!1.96e-08!14;UBERON:0000161!2.84e-08!35;UBERON:0002367!7.44e-08!11;UBERON:0010147!7.44e-08!11;UBERON:0009846!7.44e-08!11;UBERON:0003353!7.44e-08!11;UBERON:0004902!7.44e-08!11;UBERON:0003820!7.44e-08!11;UBERON:0009847!7.44e-08!11;UBERON:0004122!7.85e-08!15;UBERON:0001828!1.46e-07!8;UBERON:0003937!3.56e-07!12;UBERON:0005399!3.56e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.38e-09;4!UBERON:0000415;1.38e-09;4!UBERON:0007240;1.38e-09;4!UBERON:0005742;1.38e-09;4!UBERON:0005734;1.38e-09;4!UBERON:0004664;1.38e-09;4!UBERON:0004663;1.38e-09;4!UBERON:0000995;8.07e-09;17!UBERON:0003975;2.21e-08;18!UBERON:0004175;2.56e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,1.32e-09,4;UBERON:0007240,1.32e-09,4;UBERON:0005742,1.32e-09,4;UBERON:0005734,1.32e-09,4;UBERON:0004664,1.32e-09,4;UBERON:0004663,1.32e-09,4;UBERON:0000995,2.60e-07,21;UBERON:0005795,5.09e-07,22;UBERON:0003975,5.09e-07,22 | |||
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| ||
|short_description=p@chr4:43341736..43341745,+ | |short_description=p@chr4:43341736..43341745,+ | ||
}} | }} |
Latest revision as of 05:20, 30 July 2015
Short description: | p@chr4:43341736..43341745, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:43341736..43341745, + |
Coexpression cluster: | C1401_Smooth_Fibroblast_leiomyoma_malignant_Small_Skeletal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterine smooth muscle cell | 1.84e-34 | 1 |
fibroblast of tunica adventitia of artery | 1.32e-09 | 4 |
fibroblast of the aortic adventitia | 1.32e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
artery wall | 1.32e-09 | 4 |
tunica adventitia of artery | 1.32e-09 | 4 |
adventitia | 1.32e-09 | 4 |
tunica adventitia of blood vessel | 1.32e-09 | 4 |
aorta tunica adventitia | 1.32e-09 | 4 |
aorta wall | 1.32e-09 | 4 |
uterus | 2.60e-07 | 21 |
embryonic uterus | 5.09e-07 | 22 |
internal female genitalia | 5.09e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.59e-12 | 3 |
leiomyoma | 2.59e-12 | 3 |
benign neoplasm | 1.44e-09 | 4 |