FFCP PHASE1:Hg19::chr4:39033232..39033249,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:39033232..39033249,- | |||
|description=CAGE_peak_at_chr4:39033232..39033249,- | |description=CAGE_peak_at_chr4:39033232..39033249,- | ||
|id=chr4:39033232..39033249,- | |id=chr4:39033232..39033249,- | ||
|ontology_enrichment_celltype=CL:0000945!2.62e-18!24;CL:0000826!2.62e-18!24;CL:0000838!2.76e-09!52;CL:0000542!5.07e-09!53;CL:0000051!5.07e-09!53;CL:0002150!5.42e-07!3;CL:0000861!5.42e-07!3 | |ontology_enrichment_celltype=CL:0000945!2.62e-18!24;CL:0000826!2.62e-18!24;CL:0000838!2.76e-09!52;CL:0000542!5.07e-09!53;CL:0000051!5.07e-09!53;CL:0002150!5.42e-07!3;CL:0000861!5.42e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.32e-22;24!CL:0002195;6.42e-09;2!CL:0002571;6.42e-09;2!CL:0000542;9.83e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.16e-22,24;CL:0000826,1.16e-22,24;CL:0000838,2.32e-10,52;CL:0000542,3.69e-10,53;CL:0000051,3.69e-10,53;CL:0002195,8.74e-09,2;CL:0002571,8.74e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0009847;2.17e-21;3!UBERON:0003353;2.17e-21;3!CL:0000051;9.83e-08;53 | |||
|ontology_enrichment_disease=DOID:1749!2.03e-08!14 | |ontology_enrichment_disease=DOID:1749!2.03e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:4960;5.10e-17;1!DOID:0070004;5.10e-17;1!DOID:3910;3.57e-09;2!DOID:0060058;5.26e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,5.53e-17,1;DOID:0070004,5.53e-17,1;DOID:3910,3.43e-09,2;DOID:0060058,4.81e-07,10 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;3.57e-09;2!UBERON:0002173;3.57e-09;2!UBERON:0002186;3.57e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,3.43e-09,2;UBERON:0002173,3.43e-09,2;UBERON:0002186,3.43e-09,2;UBERON:0005153,5.70e-07,37 | |||
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| ||
|short_description=p@chr4:39033232..39033249,- | |short_description=p@chr4:39033232..39033249,- | ||
}} | }} |
Latest revision as of 05:01, 30 July 2015
Short description: | p@chr4:39033232..39033249, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:39033232..39033249, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.16e-22 | 24 |
pro-B cell | 1.16e-22 | 24 |
lymphoid lineage restricted progenitor cell | 2.32e-10 | 52 |
lymphocyte | 3.69e-10 | 53 |
common lymphoid progenitor | 3.69e-10 | 53 |
hepatic stem cell | 8.74e-09 | 2 |
hepatic mesenchymal stem cell | 8.74e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 3.43e-09 | 2 |
alveolar duct | 3.43e-09 | 2 |
bronchiole | 3.43e-09 | 2 |
epithelial bud | 5.70e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 5.53e-17 | 1 |
myeloma | 5.53e-17 | 1 |
lung adenocarcinoma | 3.43e-09 | 2 |
lymphoma | 4.81e-07 | 10 |