FFCP PHASE1:Hg19::chr4:28837473..28837475,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:28837473..28837475,+ | |||
|coexpression_cluster_id=C4406 | |coexpression_cluster_id=C4406 | ||
|description=CAGE_peak_at_chr4:28837473..28837475,+ | |description=CAGE_peak_at_chr4:28837473..28837475,+ | ||
|id=chr4:28837473..28837475,+ | |id=chr4:28837473..28837475,+ | ||
|ontology_enrichment_celltype=CL:0000515!9.78e-14!4;CL:0002504!2.70e-08!3;CL:1000279!2.70e-08!3;CL:1000280!2.70e-08!3;CL:0002601!4.78e-07!1 | |ontology_enrichment_celltype=CL:0000515!9.78e-14!4;CL:0002504!2.70e-08!3;CL:1000279!2.70e-08!3;CL:1000280!2.70e-08!3;CL:0002601!4.78e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000515;3.27e-23;3!CL:0000056;8.69e-18;4!CL:0000680;8.99e-11;7!CL:0000128;8.99e-11;7!CL:0000126;8.99e-11;7!CL:0000127;8.99e-11;7!CL:0002570;1.35e-09;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,8.69e-18,4;CL:0000128,8.16e-11,7;CL:0000126,8.16e-11,7;CL:0000127,8.16e-11,7;CL:0002453,8.16e-11,7;CL:0002570,1.47e-09,8 | |||
|ontology_enrichment_development_v019=CL:0000515;8.69e-18;4!UBERON:0006238;2.47e-07;10 | |||
|ontology_enrichment_disease=DOID:2513!5.06e-07!1 | |ontology_enrichment_disease=DOID:2513!5.06e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:3093;7.92e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,7.48e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0000200!1.45e-08!6;UBERON:0002771!3.90e-08!3;UBERON:0007029!3.57e-07!1;UBERON:0003112!7.15e-07!1;UBERON:0000032!7.15e-07!1;UBERON:0005253!7.15e-07!1;UBERON:0003128!7.15e-07!1;UBERON:0002241!7.15e-07!1;UBERON:0001703!7.15e-07!1;UBERON:0004761!7.15e-07!1;UBERON:0009617!7.15e-07!1 | |ontology_enrichment_uberon=UBERON:0000200!1.45e-08!6;UBERON:0002771!3.90e-08!3;UBERON:0007029!3.57e-07!1;UBERON:0003112!7.15e-07!1;UBERON:0000032!7.15e-07!1;UBERON:0005253!7.15e-07!1;UBERON:0003128!7.15e-07!1;UBERON:0002241!7.15e-07!1;UBERON:0001703!7.15e-07!1;UBERON:0004761!7.15e-07!1;UBERON:0009617!7.15e-07!1 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr4:28837473..28837475,+ | |short_description=p@chr4:28837473..28837475,+ | ||
}} | }} |
Latest revision as of 04:43, 30 July 2015
Short description: | p@chr4:28837473..28837475, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:28837473..28837475, + |
Coexpression cluster: | C4406_astrocytoma_Myoblast_mesenchymal_spindle_Smooth_Preadipocyte_Small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 8.69e-18 | 4 |
oligodendrocyte | 8.16e-11 | 7 |
macroglial cell | 8.16e-11 | 7 |
astrocyte | 8.16e-11 | 7 |
oligodendrocyte precursor cell | 8.16e-11 | 7 |
mesenchymal stem cell of adipose | 1.47e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 7.48e-07 | 11 |