FFCP PHASE1:Hg19::chr4:25664152..25664169,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:25664152..25664169,+ | |||
|coexpression_cluster_id=C95 | |coexpression_cluster_id=C95 | ||
|description=CAGE_peak_at_chr4:25664152..25664169,+ | |description=CAGE_peak_at_chr4:25664152..25664169,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002605!8.03e-09!3;CL:0000313!2.67e-07!1 | |ontology_enrichment_celltype=CL:0002605!8.03e-09!3;CL:0000313!2.67e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002149;8.02e-07;6!CL:0002255;8.02e-07;6 | |ontology_enrichment_celltype_v019=CL:0002149;8.02e-07;6!CL:0002255;8.02e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002149,8.48e-07,6;CL:0002255,8.48e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0005754;8.34e-34;1!UBERON:0007297;1.17e-17;2!UBERON:0008947;4.64e-11;29!UBERON:0001041;1.02e-10;30 | |ontology_enrichment_development_v019=UBERON:0005754;8.34e-34;1!UBERON:0007297;1.17e-17;2!UBERON:0008947;4.64e-11;29!UBERON:0001041;1.02e-10;30 | ||
|ontology_enrichment_disease=DOID:2152!2.67e-07!1;DOID:178!3.02e-07!1;DOID:326!3.02e-07!1;DOID:3978!3.02e-07!1;DOID:3394!3.02e-07!1;DOID:5844!3.02e-07!1 | |ontology_enrichment_disease=DOID:2152!2.67e-07!1;DOID:178!3.02e-07!1;DOID:326!3.02e-07!1;DOID:3978!3.02e-07!1;DOID:3394!3.02e-07!1;DOID:5844!3.02e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:3001;8.02e-07;6 | |ontology_enrichment_disease_v019=DOID:3001;8.02e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:3001,8.48e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002171!9.91e-08!1;UBERON:0006518!9.91e-08!1;UBERON:0008949!9.91e-08!1;UBERON:0000101!9.91e-08!1;UBERON:0002167!9.91e-08!1;UBERON:0000998!1.27e-07!1;UBERON:0006868!1.27e-07!1;UBERON:0007029!1.74e-07!1;UBERON:0004911!2.67e-07!1;UBERON:0002372!7.40e-07!1;UBERON:0001961!7.40e-07!1;UBERON:0001744!7.40e-07!1;UBERON:0001735!7.40e-07!1 | |ontology_enrichment_uberon=UBERON:0002171!9.91e-08!1;UBERON:0006518!9.91e-08!1;UBERON:0008949!9.91e-08!1;UBERON:0000101!9.91e-08!1;UBERON:0002167!9.91e-08!1;UBERON:0000998!1.27e-07!1;UBERON:0006868!1.27e-07!1;UBERON:0007029!1.74e-07!1;UBERON:0004911!2.67e-07!1;UBERON:0002372!7.40e-07!1;UBERON:0001961!7.40e-07!1;UBERON:0001744!7.40e-07!1;UBERON:0001735!7.40e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.84e-34;1!UBERON:0006518;1.84e-34;1!UBERON:0008949;1.84e-34;1!UBERON:0000101;1.84e-34;1!UBERON:0002167;1.84e-34;1!UBERON:0000998;8.34e-34;1!UBERON:0006868;8.34e-34;1!UBERON:0002048;2.49e-14;22!UBERON:0000117;2.49e-14;22!UBERON:0000171;2.49e-14;22!UBERON:0000170;2.49e-14;22!UBERON:0006947;3.06e-12;3!UBERON:0004054;3.06e-12;3!UBERON:0005904;1.63e-09;4!UBERON:0005178;1.39e-08;34!UBERON:0002224;1.39e-08;34!UBERON:0004175;2.91e-07;21!UBERON:0000065;5.51e-07;44!UBERON:0005181;7.04e-07;35 | |ontology_enrichment_uberon_v019=UBERON:0002171;1.84e-34;1!UBERON:0006518;1.84e-34;1!UBERON:0008949;1.84e-34;1!UBERON:0000101;1.84e-34;1!UBERON:0002167;1.84e-34;1!UBERON:0000998;8.34e-34;1!UBERON:0006868;8.34e-34;1!UBERON:0002048;2.49e-14;22!UBERON:0000117;2.49e-14;22!UBERON:0000171;2.49e-14;22!UBERON:0000170;2.49e-14;22!UBERON:0006947;3.06e-12;3!UBERON:0004054;3.06e-12;3!UBERON:0005904;1.63e-09;4!UBERON:0005178;1.39e-08;34!UBERON:0002224;1.39e-08;34!UBERON:0004175;2.91e-07;21!UBERON:0000065;5.51e-07;44!UBERON:0005181;7.04e-07;35 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.84e-34,1;UBERON:0006518,1.84e-34,1;UBERON:0008949,1.84e-34,1;UBERON:0000101,1.84e-34,1;UBERON:0002167,1.84e-34,1;UBERON:0000998,7.06e-34,1;UBERON:0006868,7.06e-34,1;UBERON:0002048,2.38e-14,22;UBERON:0000117,2.38e-14,22;UBERON:0000171,2.38e-14,22;UBERON:0000170,2.38e-14,22;UBERON:0005597,2.38e-14,22;UBERON:0000118,2.38e-14,22;UBERON:0006947,2.89e-12,3;UBERON:0004054,2.89e-12,3;UBERON:0005178,1.48e-09,34;UBERON:0002224,1.48e-09,34;UBERON:0005904,1.57e-09,4;UBERON:0005181,2.65e-09,35;UBERON:0005153,7.74e-09,37;UBERON:0008947,1.27e-08,38;UBERON:0003258,1.27e-08,38;UBERON:0005157,4.22e-07,47 | |||
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|short_description=p@chr4:25664152..25664169,+ | |short_description=p@chr4:25664152..25664169,+ | ||
}} | }} |
Latest revision as of 04:33, 30 July 2015
Short description: | p@chr4:25664152..25664169, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:25664152..25664169, + |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 8.48e-07 | 6 |
stromal cell of endometrium | 8.48e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.84e-34 | 1 |
right lung lobe | 1.84e-34 | 1 |
lower lobe of lung | 1.84e-34 | 1 |
lobe of lung | 1.84e-34 | 1 |
right lung | 1.84e-34 | 1 |
seminal vesicle | 7.06e-34 | 1 |
seminal fluid secreting gland | 7.06e-34 | 1 |
lung | 2.38e-14 | 22 |
respiratory tube | 2.38e-14 | 22 |
respiration organ | 2.38e-14 | 22 |
pair of lungs | 2.38e-14 | 22 |
lung primordium | 2.38e-14 | 22 |
lung bud | 2.38e-14 | 22 |
male genital duct | 2.89e-12 | 3 |
internal male genitalia | 2.89e-12 | 3 |
thoracic cavity element | 1.48e-09 | 34 |
thoracic cavity | 1.48e-09 | 34 |
duct of male reproductive system | 1.57e-09 | 4 |
thoracic segment organ | 2.65e-09 | 35 |
epithelial bud | 7.74e-09 | 37 |
respiratory primordium | 1.27e-08 | 38 |
endoderm of foregut | 1.27e-08 | 38 |
epithelial fold | 4.22e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 8.48e-07 | 6 |