FFCP PHASE1:Hg19::chr4:19458340..19458348,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=268bp_to_ENST00000505347_5end | |||
|cluster_id=chr4:19458340..19458348,- | |||
|description=CAGE_peak_2_at_ENST00000505347_5end | |||
|id=chr4:19458340..19458348,- | |||
|ontology_enrichment_celltype=CL:0002149!5.11e-19!6;CL:0002255!5.11e-19!6;CL:0000223!3.32e-08!59;CL:0002573!3.63e-07!2;CL:0000066!4.78e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002149;6.78e-23;6!CL:0002255;6.78e-23;6!CL:0002253;9.07e-18;2!CL:0002573;2.59e-12;2!CL:0000214;2.59e-12;3!CL:0000499;2.37e-11;28!CL:0002563;1.44e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,4.86e-23,6;CL:0002255,4.86e-23,6;CL:0002253,1.27e-17,2;CL:0000214,2.59e-12,3;CL:0002573,2.89e-12,2;CL:0000499,2.13e-11,28;CL:0002563,1.70e-09,4;CL:0002076,8.13e-08,42 | |||
|ontology_enrichment_development_v019=UBERON:0005795;3.47e-14;10 | |||
|ontology_enrichment_disease=DOID:305!1.04e-21!106;DOID:0050687!1.10e-20!143;DOID:14566!2.18e-19!239;DOID:3001!5.11e-19!6;DOID:299!4.35e-16!25;DOID:162!4.92e-16!235;DOID:5409!1.98e-10!4;DOID:1325!2.95e-10!7;DOID:3904!2.95e-10!7;DOID:4468!4.34e-10!2;DOID:120!1.86e-09!27;DOID:0050686!5.86e-09!137;DOID:193!1.03e-08!29 | |||
|ontology_enrichment_disease_v019=DOID:3001;6.78e-23;6!DOID:299;1.28e-12;25!DOID:5409;1.12e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,4.86e-23,6;DOID:299,1.23e-12,25;DOID:5409,1.12e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0000995!1.71e-15!21;UBERON:0005795!1.03e-14!22;UBERON:0003975!1.03e-14!22;UBERON:0004175!9.44e-13!25;UBERON:0003134!6.47e-10!37;UBERON:0000474!6.47e-10!37;UBERON:0003100!9.16e-09!41;UBERON:0005156!3.32e-08!59;UBERON:0000990!3.32e-08!59;UBERON:0003133!3.23e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;2.59e-12;3!UBERON:0007616;2.59e-12;3!UBERON:0002217;2.59e-12;3!UBERON:0002018;2.59e-12;3!UBERON:0001052;1.44e-09;4!UBERON:0001242;1.44e-09;4!UBERON:0001262;1.44e-09;4!UBERON:0004786;1.44e-09;4!UBERON:0004808;1.44e-09;4!UBERON:0001277;1.44e-09;4!UBERON:0000995;9.25e-09;17!UBERON:0003975;2.51e-08;18!UBERON:0004907;6.55e-08;5!UBERON:0004175;2.86e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,2.59e-12,3;UBERON:0007616,2.59e-12,3;UBERON:0002217,2.59e-12,3;UBERON:0002018,2.59e-12,3;UBERON:0001052,1.70e-09,4;UBERON:0001242,1.70e-09,4;UBERON:0001262,1.70e-09,4;UBERON:0004786,1.70e-09,4;UBERON:0004808,1.70e-09,4;UBERON:0001277,1.70e-09,4;UBERON:0004907,7.49e-08,5;UBERON:0000995,2.60e-07,21;UBERON:0005795,5.09e-07,22;UBERON:0003975,5.09e-07,22 | |||
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| ||
|short_description=p2@ENST00000505347 | |||
}} | }} |
Latest revision as of 04:15, 30 July 2015
Short description: | p2@ENST00000505347 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000505347_5end |
Coexpression cluster: | NA |
Association with transcript: | 268bp_to_ENST00000505347_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 4.86e-23 | 6 |
stromal cell of endometrium | 4.86e-23 | 6 |
epithelial cell of large intestine | 1.27e-17 | 2 |
synovial cell | 2.59e-12 | 3 |
Schwann cell | 2.89e-12 | 2 |
stromal cell | 2.13e-11 | 28 |
intestinal epithelial cell | 1.70e-09 | 4 |
endo-epithelial cell | 8.13e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 2.59e-12 | 3 |
layer of synovial tissue | 2.59e-12 | 3 |
synovial joint | 2.59e-12 | 3 |
synovial membrane of synovial joint | 2.59e-12 | 3 |
rectum | 1.70e-09 | 4 |
intestinal mucosa | 1.70e-09 | 4 |
wall of intestine | 1.70e-09 | 4 |
gastrointestinal system mucosa | 1.70e-09 | 4 |
gastrointestinal system epithelium | 1.70e-09 | 4 |
intestinal epithelium | 1.70e-09 | 4 |
lower digestive tract | 7.49e-08 | 5 |
uterus | 2.60e-07 | 21 |
embryonic uterus | 5.09e-07 | 22 |
internal female genitalia | 5.09e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 4.86e-23 | 6 |
adenocarcinoma | 1.23e-12 | 25 |
lung small cell carcinoma | 1.12e-09 | 4 |