FFCP PHASE1:Hg19::chr4:185314151..185314178,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:185314151..185314178,- | |||
|coexpression_cluster_id=C687 | |||
|description=CAGE_peak_at_chr4:185314151..185314178,- | |description=CAGE_peak_at_chr4:185314151..185314178,- | ||
|id=chr4:185314151..185314178,- | |id=chr4:185314151..185314178,- | ||
|ontology_enrichment_celltype=CL:0002194!1.44e-72!63;CL:0000576!1.44e-72!63;CL:0000040!1.44e-72!63;CL:0000559!1.44e-72!63;CL:0002009!9.41e-70!65;CL:0000766!1.75e-66!76;CL:0002057!2.41e-64!42;CL:0000839!2.04e-63!70;CL:0000557!2.95e-62!71;CL:0000860!5.27e-59!45;CL:0000763!7.71e-44!112;CL:0000049!7.71e-44!112;CL:0000738!7.99e-40!140;CL:0002087!2.13e-37!119;CL:0002031!3.68e-31!124;CL:0000037!2.58e-28!172;CL:0000566!2.58e-28!172;CL:0002032!4.26e-26!165;CL:0000837!4.26e-26!165;CL:0000988!1.42e-25!182;CL:0002393!3.95e-13!9;CL:0002397!3.95e-13!9;CL:0000451!1.83e-08!10;CL:0000990!2.45e-08!8 | |ontology_enrichment_celltype=CL:0002194!1.44e-72!63;CL:0000576!1.44e-72!63;CL:0000040!1.44e-72!63;CL:0000559!1.44e-72!63;CL:0002009!9.41e-70!65;CL:0000766!1.75e-66!76;CL:0002057!2.41e-64!42;CL:0000839!2.04e-63!70;CL:0000557!2.95e-62!71;CL:0000860!5.27e-59!45;CL:0000763!7.71e-44!112;CL:0000049!7.71e-44!112;CL:0000738!7.99e-40!140;CL:0002087!2.13e-37!119;CL:0002031!3.68e-31!124;CL:0000037!2.58e-28!172;CL:0000566!2.58e-28!172;CL:0002032!4.26e-26!165;CL:0000837!4.26e-26!165;CL:0000988!1.42e-25!182;CL:0002393!3.95e-13!9;CL:0002397!3.95e-13!9;CL:0000451!1.83e-08!10;CL:0000990!2.45e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.41e-97;33!CL:0002057;4.41e-97;33!CL:0000473;2.77e-96;39!CL:0000234;2.77e-96;39!CL:0000576;2.21e-72;48!CL:0000766;2.02e-50;69!CL:0000763;3.56e-24;100!CL:0000235;1.32e-19;6!CL:0000738;5.98e-17;136!CL:0002087;4.14e-16;104!CL:0002393;4.30e-13;6!CL:0002397;4.30e-13;6!CL:0000990;1.28e-12;8!CL:0002619;7.62e-12;3!CL:0000451;3.32e-10;10!CL:0000988;8.49e-09;177!CL:0000219;1.66e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.09e-132,59;CL:0000576,1.09e-132,59;CL:0000040,1.09e-132,59;CL:0000559,1.09e-132,59;CL:0000473,2.44e-128,48;CL:0000234,2.44e-128,48;CL:0002009,4.86e-128,61;CL:0000839,1.24e-117,66;CL:0000766,4.62e-116,72;CL:0000557,9.84e-116,67;CL:0000860,2.84e-109,42;CL:0002057,2.84e-109,42;CL:0000763,1.31e-83,108;CL:0000049,1.31e-83,108;CL:0000738,4.32e-64,136;CL:0002087,4.37e-63,115;CL:0002031,5.30e-60,120;CL:0002032,2.34e-52,161;CL:0000837,2.34e-52,161;CL:0000037,1.08e-49,168;CL:0000988,1.42e-46,177;CL:0000235,1.37e-19,6;CL:0000134,2.56e-17,354;CL:0002320,9.53e-17,361;CL:0000219,9.75e-15,386;CL:0000990,1.23e-12,8;CL:0000048,2.80e-12,427;CL:0000723,6.10e-12,433;CL:0002619,7.63e-12,3;CL:0000034,1.67e-11,441;CL:0000451,3.21e-10,10;CL:0002393,1.35e-08,9;CL:0002397,1.35e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.26e-79;42!CL:0000049;8.39e-25;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.16e-57!102;UBERON:0003061!5.16e-57!102;UBERON:0002193!1.38e-53!112;UBERON:0002371!4.07e-53!80;UBERON:0001474!4.33e-48!86;UBERON:0002405!9.58e-42!115;UBERON:0004765!3.17e-41!101;UBERON:0001434!3.17e-41!101;UBERON:0003081!2.28e-22!216;UBERON:0007023!6.11e-22!115;UBERON:0002204!2.87e-19!167;UBERON:0000062!5.30e-09!511;UBERON:0000926!5.23e-08!448;UBERON:0004120!5.23e-08!448;UBERON:0006603!5.23e-08!448;UBERON:0000467!5.43e-07!625;UBERON:0000480!6.20e-07!626 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.24e-101,76;UBERON:0001474,9.56e-93,82;UBERON:0002405,6.63e-91,93;UBERON:0002390,1.01e-85,98;UBERON:0003061,1.01e-85,98;UBERON:0004765,1.39e-83,90;UBERON:0002193,8.84e-77,108;UBERON:0001434,3.62e-74,100;UBERON:0002204,5.58e-40,167;UBERON:0003081,8.27e-39,203;UBERON:0000926,7.59e-22,315;UBERON:0004120,7.59e-22,315;UBERON:0006603,7.59e-22,315;UBERON:0002384,5.72e-16,371;UBERON:0000923,8.83e-07,560;UBERON:0010316,8.83e-07,560;UBERON:0005291,8.83e-07,560;UBERON:0006598,8.83e-07,560;UBERON:0010317,8.83e-07,560;UBERON:0002532,8.83e-07,560 | |||
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|short_description=p@chr4:185314151..185314178,- | |short_description=p@chr4:185314151..185314178,- | ||
}} | }} |
Latest revision as of 03:52, 30 July 2015
Short description: | p@chr4:185314151..185314178, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:185314151..185314178, - |
Coexpression cluster: | C687_CD14_Macrophage_Monocytederived_Dendritic_Endothelial_Pericytes_schwannoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.24e-101 | 76 |
bone element | 9.56e-93 | 82 |
immune system | 6.63e-91 | 93 |
hematopoietic system | 1.01e-85 | 98 |
blood island | 1.01e-85 | 98 |
skeletal element | 1.39e-83 | 90 |
hemolymphoid system | 8.84e-77 | 108 |
skeletal system | 3.62e-74 | 100 |
musculoskeletal system | 5.58e-40 | 167 |
lateral plate mesoderm | 8.27e-39 | 203 |
mesoderm | 7.59e-22 | 315 |
mesoderm-derived structure | 7.59e-22 | 315 |
presumptive mesoderm | 7.59e-22 | 315 |
connective tissue | 5.72e-16 | 371 |
germ layer | 8.83e-07 | 560 |
germ layer / neural crest | 8.83e-07 | 560 |
embryonic tissue | 8.83e-07 | 560 |
presumptive structure | 8.83e-07 | 560 |
germ layer / neural crest derived structure | 8.83e-07 | 560 |
epiblast (generic) | 8.83e-07 | 560 |