FFCP PHASE1:Hg19::chr4:183424089..183424094,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:183424089..183424094,+ | |||
|coexpression_cluster_id=C4398 | |||
|description=CAGE_peak_at_chr4:183424089..183424094,+ | |||
|id=chr4:183424089..183424094,+ | |||
|ontology_enrichment_celltype=CL:0002319!8.24e-07!25 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.80e-22!94;UBERON:0001016!2.80e-22!94;UBERON:0001017!9.22e-22!82;UBERON:0005743!5.34e-21!86;UBERON:0000955!6.74e-20!69;UBERON:0006238!6.74e-20!69;UBERON:0001049!2.93e-18!57;UBERON:0005068!2.93e-18!57;UBERON:0006241!2.93e-18!57;UBERON:0007135!2.93e-18!57;UBERON:0002616!1.26e-17!59;UBERON:0003075!7.05e-15!86;UBERON:0007284!7.05e-15!86;UBERON:0002780!2.87e-14!41;UBERON:0001890!2.87e-14!41;UBERON:0006240!2.87e-14!41;UBERON:0002346!1.22e-13!90;UBERON:0003080!1.46e-13!42;UBERON:0004121!2.38e-13!169;UBERON:0000924!1.27e-12!173;UBERON:0006601!1.27e-12!173;UBERON:0002020!2.90e-12!34;UBERON:0003528!2.90e-12!34;UBERON:0001869!3.97e-12!32;UBERON:0001893!7.27e-12!34;UBERON:0000153!1.27e-11!129;UBERON:0007811!1.27e-11!129;UBERON:0002791!1.77e-11!33;UBERON:0000033!2.66e-11!123;UBERON:0002619!1.20e-10!22;UBERON:0003056!2.38e-10!61;UBERON:0000956!2.69e-10!25;UBERON:0000203!2.69e-10!25;UBERON:0001950!1.92e-09!20;UBERON:0007023!6.68e-09!115;UBERON:0000475!9.32e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.48e-12;22!UBERON:0003528;9.21e-11;34!UBERON:0002020;9.21e-11;34!UBERON:0002780;3.56e-10;41!UBERON:0001890;3.56e-10;41!UBERON:0000956;4.39e-10;25!UBERON:0000203;4.39e-10;25!UBERON:0001869;7.58e-10;32!UBERON:0002791;8.36e-10;32!UBERON:0001950;9.94e-10;20!UBERON:0000073;3.96e-09;53!UBERON:0002616;3.96e-09;53!UBERON:0001893;4.01e-08;34!UBERON:0000349;5.65e-08;5!UBERON:0001871;8.08e-08;6!UBERON:0001017;3.92e-07;75!UBERON:0001016;8.47e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.12e-15,81;UBERON:0001016,2.96e-15,89;UBERON:0001049,4.11e-15,56;UBERON:0005068,4.11e-15,56;UBERON:0006241,4.11e-15,56;UBERON:0007135,4.11e-15,56;UBERON:0000955,2.24e-14,68;UBERON:0006238,2.24e-14,68;UBERON:0000073,8.06e-14,53;UBERON:0002616,8.06e-14,53;UBERON:0002780,1.08e-13,41;UBERON:0001890,1.08e-13,41;UBERON:0003080,1.08e-13,41;UBERON:0006240,1.08e-13,41;UBERON:0003075,9.04e-13,82;UBERON:0007284,9.04e-13,82;UBERON:0003056,1.08e-12,61;UBERON:0002619,4.60e-12,22;UBERON:0002346,9.41e-12,86;UBERON:0003528,4.93e-11,34;UBERON:0002020,4.93e-11,34;UBERON:0002791,1.03e-10,32;UBERON:0001869,1.03e-10,32;UBERON:0000956,3.26e-10,25;UBERON:0000203,3.26e-10,25;UBERON:0001950,7.21e-10,20;UBERON:0001893,7.84e-10,34;UBERON:0010371,1.20e-09,104;UBERON:0000349,2.57e-08,5;UBERON:0001871,8.05e-08,6;UBERON:0010314,1.93e-07,132 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.422863212287913,0,0,0,0,0,0,0,0,0.655324116390517,0.263766978228454,0,0,0,0.602694528023977,0,0.487932798790507,0.246242116153576,0.204000691244253,0.626909442956176,0,0.958120975510189,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.541607727530031,0,0,0,0,0,0.296573126324121,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0.486634870302636,5.86115866417221,3.1042115644759,4.3917392846563,0.654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0.35576626268671,1.67360306382335,0,0.760272105718513,0,0.367663080345869,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,1.05927344650575,0.573673241497627,0,0,0,0,0.622422070799533,0,0.326923806226917,0.302714855289863,0,0,0,0,0,0.23486899728753,0.485618833104395,0.421352420106746,0,0.61417158655884,0.206651562351531,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0.30648779579902,0,0,2.51145489964407,1.06778694409284,0,1.50045548042201,0.103052529238439,1.8034837803194,0.37223371266318,8.77636927654584,1.75386609290158,2.77677151668526,0.552299391853796,0.161646056818812,3.19508633264953,0.906768884048762,0,0.193260853163297,0.818238361772504,0,0.121973706129595,0.265059536642971,0.464775771478074,0.310983165046111,0.252320850875628,5.83963774521328,0,0,0,0,0,0.118306800039844,0.337169380156203,0.241011029883482,0.220587945464788,0.217879444092406,0.237270619111097,0,0.196221465125346,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0.245976877086227,0,0,0,0,0,0,0,0,0.115930404975077,0,0.288732895522148,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0.425325291727159,0.179117045405697,0,0,0,0.088048434013226,0.207328115540772,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,0.517086863031111,0,0,0,1.04007436911366,0,1.41849132023278,0.266422179016099,0,0,0,0,0,0,0.602878754119172,0,0.799783929456456,0,0,0,0,0,0,0.723906533337896,0.61642896765115,1.43248770591916,0.112085143993527,0,0,0,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,1.24782516918484,0,1.41932173530541,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,5.98501695823444,0.841980283299221,0.768834895534206,1.02341449813341,0.804269605718038,0,0,0.355123450626254,0.164254312027618,0.519254429183621,0.116210378459959,0.846016147141356,0.200506470303285,0.0920809889358963,0,0,0.131124414959424,0.451199612907412,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,1.13345112812495,1.64825036673018,3.71292749642646,0,0,1.6068392984416,0.193341436584244,1.54048617114644,1.5350367472613,0.964856007391714,2.14840489736547,2.61030049045611,0.426133137080504,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0.744316738719335,1.58189712359363,0.762520775695299,0,0,0,0,0.179872457583315,0.274537029736055,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,2.30584991324076,0,0,0.23874448473769,0.296964680832639,0,2.98244294329889,1.96937182974718,0.890469640183247,2.30725423917463,0.211125408127993,0,0,1.76352923497993,6.54519568013791,0,0,0.718946809178615,1.07412704805365,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0.254253650292766,0,2.06846023944879,0,6.07687482266523,0.885741385813839,0.964771509003264,1.52581736317083,2.21158519862449,0.886642856860642,0,0.10893846351899,0,1.15425387755696,2.39278317278703,7.60860884480598,1.52587995496613,14.2328057217831,0.957003479195758,0.549585560411174,2.66517388009317,0,0,0,0,0,0,0,0,0.632994193584081,1.95879369790977,0.989471500037586,0.432777279484182,0.995261931078505,0.353830258013357,0,7.70954934569617,3.21266241260907,3.86361213170185,0.134802265961354,0,1.87411556580271,0,0.19566461893209,0,1.57833761139756,2.41981432097328,2.44858209304392,1.32691817219825,2.70582154946087,0.518440956986236,0.664653872707185,0,0,0,0,0,1.73559738335131,0,0.0870592065804026,0.698906672968121,0,0.19351266257817,0.146178634172371,0.0821154570532092,0,0,0.90392296312213,0.548167698587004,0,1.26621591911757,0,0.240476460754601,0,0.19980960958213,0,10.5373668472642,0.343189995723929,0,0,0,1.9026588850306,3.765702467244,0.509991088181609,0.866851769704557,1.20084057741958,0,0,0.429765441419957,0.262887354279314,0.279282401272254,0.687481272035051,0,0,0.429226048136571,0,0.201550417460179,0.720599767084807,1.16495949527454,0,0,0,0,0,3.18091875923721,1.49823746722733,1.28602518772015,2.75078873194468,0.83088067605837,0,0,1.15424157650247,0,0,0.472091293214983,0,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0,3.57814845749386,0.226624183040251,0.146552233678082,0,0.517131825446202,1.19009341568421,0.171086837884329,0,0,1.10043013569766,0,0.496166021811951,0,0,0,0.544017803369474,1.50413936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| |||
|short_description=p@chr4:183424089..183424094,+ | |||
}} |
Latest revision as of 03:45, 30 July 2015
Short description: | p@chr4:183424089..183424094, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:183424089..183424094, + |
Coexpression cluster: | C4398_choriocarcinoma_pancreatic_gastric_synovial_small_astrocytoma_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.12e-15 | 81 |
nervous system | 2.96e-15 | 89 |
neural tube | 4.11e-15 | 56 |
neural rod | 4.11e-15 | 56 |
future spinal cord | 4.11e-15 | 56 |
neural keel | 4.11e-15 | 56 |
brain | 2.24e-14 | 68 |
future brain | 2.24e-14 | 68 |
regional part of nervous system | 8.06e-14 | 53 |
regional part of brain | 8.06e-14 | 53 |
regional part of forebrain | 1.08e-13 | 41 |
forebrain | 1.08e-13 | 41 |
anterior neural tube | 1.08e-13 | 41 |
future forebrain | 1.08e-13 | 41 |
neural plate | 9.04e-13 | 82 |
presumptive neural plate | 9.04e-13 | 82 |
pre-chordal neural plate | 1.08e-12 | 61 |
regional part of cerebral cortex | 4.60e-12 | 22 |
neurectoderm | 9.41e-12 | 86 |
brain grey matter | 4.93e-11 | 34 |
gray matter | 4.93e-11 | 34 |
regional part of telencephalon | 1.03e-10 | 32 |
cerebral hemisphere | 1.03e-10 | 32 |
cerebral cortex | 3.26e-10 | 25 |
pallium | 3.26e-10 | 25 |
neocortex | 7.21e-10 | 20 |
telencephalon | 7.84e-10 | 34 |
ecto-epithelium | 1.20e-09 | 104 |
limbic system | 2.57e-08 | 5 |
temporal lobe | 8.05e-08 | 6 |
structure with developmental contribution from neural crest | 1.93e-07 | 132 |