FFCP PHASE1:Hg19::chr4:177302052..177302063,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:177302052..177302063,+ | |||
|coexpression_cluster_id=C420 | |coexpression_cluster_id=C420 | ||
|description=CAGE_peak_at_chr4:177302052..177302063,+ | |description=CAGE_peak_at_chr4:177302052..177302063,+ | ||
|id=chr4:177302052..177302063,+ | |id=chr4:177302052..177302063,+ | ||
|ontology_enrichment_celltype=CL:0002573!3.85e-13!2;CL:0000243!1.00e-08!15;CL:0000125!1.00e-08!15;CL:0000030!1.00e-08!15;CL:0000339!1.00e-08!15;CL:0000095!8.10e-08!17;CL:0000123!8.10e-08!17 | |ontology_enrichment_celltype=CL:0002573!3.85e-13!2;CL:0000243!1.00e-08!15;CL:0000125!1.00e-08!15;CL:0000030!1.00e-08!15;CL:0000339!1.00e-08!15;CL:0000095!8.10e-08!17;CL:0000123!8.10e-08!17 | ||
|ontology_enrichment_celltype_v019=CL:0002573;1.28e-53;2!CL:0000243;1.14e-37;15!CL:0000125;1.14e-37;15!CL:0000095;8.34e-34;17!CL:0002319;4.68e-24;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,1.28e-53,2;CL:0000243,1.14e-37,15;CL:0000125,1.14e-37,15;CL:0000030,1.14e-37,15;CL:0000339,1.14e-37,15;CL:0000095,8.35e-34,17;CL:0000123,8.35e-34,17;CL:0002319,4.68e-24,25;CL:0000333,2.10e-15,41;CL:0000133,4.53e-11,59;CL:0000221,3.07e-09,72 | |||
|ontology_enrichment_development_v019=CL:0000339;1.14e-37;15!UBERON:0006238;2.51e-15;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;3.84e-14;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,3.84e-14,11 | |||
|ontology_enrichment_uberon=UBERON:0002084!3.10e-10!1;UBERON:0002082!3.10e-10!1;UBERON:0004706!3.10e-10!1;UBERON:0006834!6.91e-10!1;UBERON:0001882!1.07e-09!1;UBERON:0005403!1.07e-09!1;UBERON:0008814!1.66e-09!15;UBERON:0002046!5.12e-08!5;UBERON:0004117!5.12e-08!5;UBERON:0007689!5.12e-08!5;UBERON:0007123!5.12e-08!5;UBERON:0003091!5.12e-08!5;UBERON:0009722!1.19e-07!11;UBERON:0007690!1.19e-07!11 | |ontology_enrichment_uberon=UBERON:0002084!3.10e-10!1;UBERON:0002082!3.10e-10!1;UBERON:0004706!3.10e-10!1;UBERON:0006834!6.91e-10!1;UBERON:0001882!1.07e-09!1;UBERON:0005403!1.07e-09!1;UBERON:0008814!1.66e-09!15;UBERON:0002046!5.12e-08!5;UBERON:0004117!5.12e-08!5;UBERON:0007689!5.12e-08!5;UBERON:0007123!5.12e-08!5;UBERON:0003091!5.12e-08!5;UBERON:0009722!1.19e-07!11;UBERON:0007690!1.19e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0000010;1.03e-18;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.03e-18,8;UBERON:0001016,1.50e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.667852230137435,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76675467895698,1.569042694685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739202355635845,0,0,0,0.662091970365432,0,0,0,0,0,0.082092520749339,3.57814845749386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.86325604237279,6.30579195217767,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0.33639558774184,0,0,0,0.342233301085281,0,0,0.332660356546013,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.667852230137435,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76675467895698,1.569042694685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739202355635845,0,0,0,0.662091970365432,0,0,0,0,0,0.082092520749339,3.57814845749386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.86325604237279,6.30579195217767,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0.33639558774184,0,0,0,0.342233301085281,0,0,0.332660356546013,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr4:177302052..177302063,+ | |short_description=p@chr4:177302052..177302063,+ | ||
}} | }} |
Latest revision as of 03:39, 30 July 2015
Short description: | p@chr4:177302052..177302063, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:177302052..177302063, + |
Coexpression cluster: | C420_schwannoma_salivary_Mammary_skin_squamous_Smooth_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 1.28e-53 | 2 |
glial cell (sensu Vertebrata) | 1.14e-37 | 15 |
glial cell | 1.14e-37 | 15 |
glioblast | 1.14e-37 | 15 |
glioblast (sensu Vertebrata) | 1.14e-37 | 15 |
neuron associated cell | 8.35e-34 | 17 |
neuron associated cell (sensu Vertebrata) | 8.35e-34 | 17 |
neural cell | 4.68e-24 | 25 |
migratory neural crest cell | 2.10e-15 | 41 |
neurectodermal cell | 4.53e-11 | 59 |
ectodermal cell | 3.07e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 1.03e-18 | 8 |
nervous system | 1.50e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 3.84e-14 | 11 |