FFCP PHASE1:Hg19::chr4:15719160..15719162,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:15719160..15719162,+ | |||
|description=CAGE_peak_at_chr4:15719160..15719162,+ | |description=CAGE_peak_at_chr4:15719160..15719162,+ | ||
|id=chr4:15719160..15719162,+ | |id=chr4:15719160..15719162,+ | ||
|ontology_enrichment_celltype=CL:0000077!2.40e-17!19;CL:0000222!3.23e-10!119;CL:0000220!1.58e-08!246;CL:0000076!2.06e-08!62;CL:0002321!2.46e-08!248;CL:0000213!5.57e-08!57;CL:0000215!5.57e-08!57 | |ontology_enrichment_celltype=CL:0000077!2.40e-17!19;CL:0000222!3.23e-10!119;CL:0000220!1.58e-08!246;CL:0000076!2.06e-08!62;CL:0002321!2.46e-08!248;CL:0000213!5.57e-08!57;CL:0000215!5.57e-08!57 | ||
|ontology_enrichment_celltype_v019=CL:0002262;8.28e-07;2!CL:1000398;8.28e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,7.20e-07,2;CL:1000398,7.20e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;9.27e-10;5 | |||
|ontology_enrichment_disease=DOID:193!6.30e-14!29;DOID:2394!6.43e-13!14;DOID:120!4.05e-12!27;DOID:14566!9.14e-07!239 | |ontology_enrichment_disease=DOID:193!6.30e-14!29;DOID:2394!6.43e-13!14;DOID:120!4.05e-12!27;DOID:14566!9.14e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:2394;6.05e-13;14!DOID:3112;2.32e-12;1!DOID:120;3.42e-10;27!DOID:193;1.76e-09;29!DOID:4468;8.28e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.97e-13,14;DOID:3112,1.11e-12,1;DOID:120,3.93e-10,27;DOID:193,2.00e-09,29;DOID:4468,9.54e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002118!3.33e-09!5;UBERON:0004532!3.33e-09!5 | |ontology_enrichment_uberon=UBERON:0002118!3.33e-09!5;UBERON:0004532!3.33e-09!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;7.02e-13;1!UBERON:0002118;6.36e-10;5!UBERON:0002046;9.27e-10;5!UBERON:0001281;8.28e-07;2!UBERON:0003497;8.28e-07;2!UBERON:0003909;8.28e-07;2!UBERON:0003835;8.28e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,7.03e-13,1;UBERON:0002118,5.44e-10,5;UBERON:0002046,6.80e-10,5;UBERON:0004117,6.80e-10,5;UBERON:0007689,6.80e-10,5;UBERON:0007123,6.80e-10,5;UBERON:0003091,6.80e-10,5;UBERON:0001281,7.20e-07,2;UBERON:0003497,7.20e-07,2;UBERON:0003909,7.20e-07,2;UBERON:0003835,7.20e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.662794751455832,0,0,1.46062018077475,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0.221729397462564,0.43917392846563,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600182192168805,0.206105058476878,0.257640540045629,0,0,0,1.00973509697646,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0.721879481669586,0.946454400318751,0.168584690078102,0,0,0.217879444092406,0.474541238222193,0.269662616320329,0,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0.277765335475589,0,0,0,0,0.352226082707465,0.288732895522148,0.462985512576611,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0.266422179016099,0,0,0.823240336780769,0,0,0.791951872933429,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.468565659970853,0,0,0,0.664225598535437,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0.308419387605311,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0.765676274967505,0,0,0.94443704049192,0,0,0,0,0.18532421910392,0.429374660225974,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0.421258456238981,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0.405820753925408,0,0,0,0.0982490410131212,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,3.33410970433911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871507708151921,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,1.05499032264014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0.330991955875499,0,0,0.284609546029793,0,0,0,0.34823682632161,0,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0,0.959293472527256,0.19871461170299,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0.67952103036807,1.67364554099733,0.203996435272644,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316801009558219,0,0.191915197319445,0,0,0,0,0,0,2.39460383124975,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0.606596470166591,0,0.235265819698172,0,0,0.149254802886874,0,0,0.568209015825267,0.754703705257725,0,0.228840068396924,0,0.15543720058278,0.443565449968902,0.63718706865481,0,0.621051827505038,0,0.265841714557995,1.04349012362347,1.05180326298053,0.380805212168795,0.813741466409323,1.63663793282303,0.966695013382396,0.464033759878494,2.3885753321917,1.20008329398946,0,0,0,0,0.428883182749851,1.30497145982606,0.453411851024545,0.231522474323834,0.244736704506468,0.71635536432595,0.308801447160972,0.219284049578707,0.353378291891762,0.578742114812744,1.18259708457151,0.256241518587947,1.0362910251936,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523813388962845,1.80149109261106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.4582137370881,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,1.23345048838675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.662794751455832,0,0,1.46062018077475,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0.221729397462564,0.43917392846563,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600182192168805,0.206105058476878,0.257640540045629,0,0,0,1.00973509697646,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0.721879481669586,0.946454400318751,0.168584690078102,0,0,0.217879444092406,0.474541238222193,0.269662616320329,0,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0.277765335475589,0,0,0,0,0.352226082707465,0.288732895522148,0.462985512576611,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0.266422179016099,0,0,0.823240336780769,0,0,0.791951872933429,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.468565659970853,0,0,0,0.664225598535437,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0.308419387605311,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0.765676274967505,0,0,0.94443704049192,0,0,0,0,0.18532421910392,0.429374660225974,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0.421258456238981,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0.405820753925408,0,0,0,0.0982490410131212,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,3.33410970433911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871507708151921,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,1.05499032264014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0.330991955875499,0,0,0.284609546029793,0,0,0,0.34823682632161,0,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0,0.959293472527256,0.19871461170299,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0.67952103036807,1.67364554099733,0.203996435272644,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316801009558219,0,0.191915197319445,0,0,0,0,0,0,2.39460383124975,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0.606596470166591,0,0.235265819698172,0,0,0.149254802886874,0,0,0.568209015825267,0.754703705257725,0,0.228840068396924,0,0.15543720058278,0.443565449968902,0.63718706865481,0,0.621051827505038,0,0.265841714557995,1.04349012362347,1.05180326298053,0.380805212168795,0.813741466409323,1.63663793282303,0.966695013382396,0.464033759878494,2.3885753321917,1.20008329398946,0,0,0,0,0.428883182749851,1.30497145982606,0.453411851024545,0.231522474323834,0.244736704506468,0.71635536432595,0.308801447160972,0.219284049578707,0.353378291891762,0.578742114812744,1.18259708457151,0.256241518587947,1.0362910251936,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523813388962845,1.80149109261106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.4582137370881,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,1.23345048838675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:15719160..15719162,+ | |short_description=p@chr4:15719160..15719162,+ | ||
}} | }} |
Latest revision as of 02:40, 30 July 2015
Short description: | p@chr4:15719160..15719162, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:15719160..15719162, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 7.20e-07 | 2 |
endothelial cell of hepatic sinusoid | 7.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 7.03e-13 | 1 |
right ovary | 5.44e-10 | 5 |
thyroid gland | 6.80e-10 | 5 |
pharyngeal pouch | 6.80e-10 | 5 |
thyroid diverticulum | 6.80e-10 | 5 |
pharyngeal pouch 2 | 6.80e-10 | 5 |
thyroid primordium | 6.80e-10 | 5 |
hepatic sinusoid | 7.20e-07 | 2 |
abdomen blood vessel | 7.20e-07 | 2 |
sinusoid | 7.20e-07 | 2 |
abdominal segment blood vessel | 7.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.97e-13 | 14 |
papillary adenocarcinoma | 1.11e-12 | 1 |
female reproductive organ cancer | 3.93e-10 | 27 |
reproductive organ cancer | 2.00e-09 | 29 |
clear cell adenocarcinoma | 9.54e-07 | 2 |