FFCP PHASE1:Hg19::chr4:155387574..155387588,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:155387574..155387588,- | |||
|coexpression_cluster_id=C406 | |coexpression_cluster_id=C406 | ||
|description=CAGE_peak_at_chr4:155387574..155387588,- | |description=CAGE_peak_at_chr4:155387574..155387588,- | ||
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|ontology_enrichment_celltype=CL:0002166!3.04e-85!3;CL:0002159!2.03e-20!13;CL:0000594!1.09e-10!3;CL:0002077!1.72e-08!33 | |ontology_enrichment_celltype=CL:0002166!3.04e-85!3;CL:0002159!2.03e-20!13;CL:0000594!1.09e-10!3;CL:0002077!1.72e-08!33 | ||
|ontology_enrichment_celltype_v019=CL:0002166;2.39e-66;3!CL:0002159;1.43e-15;14 | |ontology_enrichment_celltype_v019=CL:0002166;2.39e-66;3!CL:0002159;1.43e-15;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0002166,2.39e-66,3;CL:0002159,1.43e-15,14;CL:0002077,2.74e-07,34 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001708!3.24e-64!4;UBERON:0001704!3.24e-64!4;UBERON:0002090!3.65e-43!6;UBERON:0003129!5.65e-24!11;UBERON:0000075!2.03e-20!13;UBERON:0005944!2.03e-20!13;UBERON:0004288!2.03e-20!13;UBERON:0003089!2.03e-20!13 | |ontology_enrichment_uberon=UBERON:0001708!3.24e-64!4;UBERON:0001704!3.24e-64!4;UBERON:0002090!3.65e-43!6;UBERON:0003129!5.65e-24!11;UBERON:0000075!2.03e-20!13;UBERON:0005944!2.03e-20!13;UBERON:0004288!2.03e-20!13;UBERON:0003089!2.03e-20!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0001708;3.10e-50;4!UBERON:0008895;3.10e-50;4!UBERON:0011159;1.48e-40;5!UBERON:0011137;2.25e-19;11!UBERON:0010323;2.25e-19;11!UBERON:0000075;8.02e-14;16!UBERON:0004765;4.34e-09;26!UBERON:0001434;4.53e-08;36 | |ontology_enrichment_uberon_v019=UBERON:0001708;3.10e-50;4!UBERON:0008895;3.10e-50;4!UBERON:0011159;1.48e-40;5!UBERON:0011137;2.25e-19;11!UBERON:0010323;2.25e-19;11!UBERON:0000075;8.02e-14;16!UBERON:0004765;4.34e-09;26!UBERON:0001434;4.53e-08;36 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,3.10e-50,4;UBERON:0008895,3.10e-50,4;UBERON:0011159,1.48e-40,5;UBERON:0010188,4.27e-34,6;UBERON:0002539,4.27e-34,6;UBERON:0008816,4.27e-34,6;UBERON:0010323,2.25e-19,11;UBERON:0011137,1.43e-15,14;UBERON:0000075,8.02e-14,16;UBERON:0008814,1.85e-12,18 | |||
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|short_description=p@chr4:155387574..155387588,- | |short_description=p@chr4:155387574..155387588,- | ||
}} | }} |
Latest revision as of 02:27, 30 July 2015
Short description: | p@chr4:155387574..155387588, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:155387574..155387588, - |
Coexpression cluster: | C406_Mallassezderived_Mesothelial_mesenchymal_chorionic_Gingival_Placental_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 2.39e-66 | 3 |
general ecto-epithelial cell | 1.43e-15 | 14 |
ecto-epithelial cell | 2.74e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 3.10e-50 | 4 |
splanchnocranium | 3.10e-50 | 4 |
primary subdivision of cranial skeletal system | 1.48e-40 | 5 |
protuberance | 4.27e-34 | 6 |
pharyngeal arch | 4.27e-34 | 6 |
embryonic head | 4.27e-34 | 6 |
cranial skeletal system | 2.25e-19 | 11 |
axial skeletal system | 1.43e-15 | 14 |
subdivision of skeletal system | 8.02e-14 | 16 |
pharyngeal arch system | 1.85e-12 | 18 |