FFCP PHASE1:Hg19::chr4:154687342..154687352,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:154687342..154687352,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_at_chr4:154687342..154687352,+ | |description=CAGE_peak_at_chr4:154687342..154687352,+ | ||
|id=chr4:154687342..154687352,+ | |id=chr4:154687342..154687352,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000322;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,2.63e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4960!1.72e-07!1;DOID:0070004!1.72e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3910;2.60e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,2.49e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.93e-26!15;UBERON:0000179!2.93e-26!15;UBERON:0000463!2.93e-26!15;UBERON:0007023!1.52e-13!115;UBERON:0007029!1.61e-07!1;UBERON:0001154!1.83e-07!1;UBERON:0001153!1.83e-07!1;UBERON:0001874!2.66e-07!1;UBERON:0003343!4.92e-07!4;UBERON:0004785!4.92e-07!4 | |ontology_enrichment_uberon=UBERON:0000178!2.93e-26!15;UBERON:0000179!2.93e-26!15;UBERON:0000463!2.93e-26!15;UBERON:0007023!1.52e-13!115;UBERON:0007029!1.61e-07!1;UBERON:0001154!1.83e-07!1;UBERON:0001153!1.83e-07!1;UBERON:0001874!2.66e-07!1;UBERON:0003343!4.92e-07!4;UBERON:0004785!4.92e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.06e-58;15!UBERON:0000179;1.06e-58;15!UBERON:0000463;1.06e-58;15!UBERON:0002390;2.85e-26;32!UBERON:0002193;1.92e-17;42!UBERON:0004903;2.60e-10;2!UBERON:0002173;2.60e-10;2!UBERON:0002186;2.60e-10;2!UBERON:0004821;2.71e-07;3!UBERON:0007499;2.71e-07;3!UBERON:0003215;2.71e-07;3!UBERON:0010368;2.71e-07;3!UBERON:0009911;2.71e-07;3!UBERON:0002299;2.71e-07;3!UBERON:0006524;2.71e-07;3!UBERON:0008874;2.71e-07;3!UBERON:0002169;2.71e-07;3!UBERON:0004894;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.10e-58,15;UBERON:0000179,1.10e-58,15;UBERON:0000463,1.10e-58,15;UBERON:0004903,2.49e-10,2;UBERON:0002173,2.49e-10,2;UBERON:0002186,2.49e-10,2;UBERON:0002390,1.11e-08,98;UBERON:0003061,1.11e-08,98;UBERON:0004535,7.59e-08,109;UBERON:0002193,7.59e-08,108;UBERON:0001009,1.26e-07,112;UBERON:0007023,1.75e-07,114;UBERON:0004821,2.63e-07,3;UBERON:0003215,2.63e-07,3;UBERON:0010368,2.63e-07,3;UBERON:0009911,2.63e-07,3;UBERON:0002299,2.63e-07,3;UBERON:0006524,2.63e-07,3;UBERON:0008874,2.63e-07,3;UBERON:0002169,2.63e-07,3;UBERON:0004894,2.63e-07,3 | |||
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|short_description=p@chr4:154687342..154687352,+ | |short_description=p@chr4:154687342..154687352,+ | ||
}} | }} |
Latest revision as of 02:26, 30 July 2015
Short description: | p@chr4:154687342..154687352, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:154687342..154687352, + |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.10e-58 | 15 |
haemolymphatic fluid | 1.10e-58 | 15 |
organism substance | 1.10e-58 | 15 |
bronchoalveolar duct junction | 2.49e-10 | 2 |
alveolar duct | 2.49e-10 | 2 |
bronchiole | 2.49e-10 | 2 |
hematopoietic system | 1.11e-08 | 98 |
blood island | 1.11e-08 | 98 |
cardiovascular system | 7.59e-08 | 109 |
hemolymphoid system | 7.59e-08 | 108 |
circulatory system | 1.26e-07 | 112 |
adult organism | 1.75e-07 | 114 |
pulmonary alveolus epithelium | 2.63e-07 | 3 |
alveolus | 2.63e-07 | 3 |
pulmonary lobule | 2.63e-07 | 3 |
lobule | 2.63e-07 | 3 |
alveolus of lung | 2.63e-07 | 3 |
alveolar system | 2.63e-07 | 3 |
pulmonary acinus | 2.63e-07 | 3 |
alveolar sac | 2.63e-07 | 3 |
alveolar wall | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.49e-10 | 2 |