FFCP PHASE1:Hg19::chr4:151749436..151749449,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:151749436..151749449,- | |||
|coexpression_cluster_id=C662 | |coexpression_cluster_id=C662 | ||
|description=CAGE_peak_at_chr4:151749436..151749449,- | |description=CAGE_peak_at_chr4:151749436..151749449,- | ||
|id=chr4:151749436..151749449,- | |id=chr4:151749436..151749449,- | ||
|ontology_enrichment_celltype=CL:0000738!3.54e-24!140;CL:0000037!3.58e-22!172;CL:0000566!3.58e-22!172;CL:0002087!8.51e-22!119;CL:0000988!5.91e-20!182;CL:0002032!1.29e-19!165;CL:0000837!1.29e-19!165;CL:0000838!2.28e-19!52;CL:0002031!2.62e-19!124;CL:0000542!7.81e-19!53;CL:0000051!7.81e-19!53;CL:0000791!6.61e-17!18;CL:0000789!6.61e-17!18;CL:0002420!6.61e-17!18;CL:0002419!6.61e-17!18;CL:0000790!6.61e-17!18;CL:0000084!1.27e-12!25;CL:0000827!1.27e-12!25;CL:0000625!1.48e-12!11;CL:0002057!5.56e-09!42;CL:0000860!4.63e-08!45;CL:0000623!6.59e-07!3;CL:0000825!6.59e-07!3;CL:0000766!7.67e-07!76 | |ontology_enrichment_celltype=CL:0000738!3.54e-24!140;CL:0000037!3.58e-22!172;CL:0000566!3.58e-22!172;CL:0002087!8.51e-22!119;CL:0000988!5.91e-20!182;CL:0002032!1.29e-19!165;CL:0000837!1.29e-19!165;CL:0000838!2.28e-19!52;CL:0002031!2.62e-19!124;CL:0000542!7.81e-19!53;CL:0000051!7.81e-19!53;CL:0000791!6.61e-17!18;CL:0000789!6.61e-17!18;CL:0002420!6.61e-17!18;CL:0002419!6.61e-17!18;CL:0000790!6.61e-17!18;CL:0000084!1.27e-12!25;CL:0000827!1.27e-12!25;CL:0000625!1.48e-12!11;CL:0002057!5.56e-09!42;CL:0000860!4.63e-08!45;CL:0000623!6.59e-07!3;CL:0000825!6.59e-07!3;CL:0000766!7.67e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000625;2.29e-25;11!CL:0000791;7.31e-25;18!CL:0000789;7.31e-25;18!CL:0002419;7.31e-25;18!CL:0000623;2.95e-19;3!CL:0000542;4.91e-18;53!CL:0000084;1.70e-17;25!CL:0000236;3.95e-11;13!CL:0000767;5.84e-09;3!CL:0000945;2.90e-08;24!CL:0002087;6.92e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,6.23e-33,52;CL:0000542,3.07e-32,53;CL:0000051,3.07e-32,53;CL:0000625,1.88e-25,11;CL:0000791,7.46e-25,18;CL:0000789,7.46e-25,18;CL:0002420,7.46e-25,18;CL:0002419,7.46e-25,18;CL:0000790,7.46e-25,18;CL:0000738,4.36e-20,136;CL:0000623,2.40e-19,3;CL:0000825,2.40e-19,3;CL:0000084,1.72e-17,25;CL:0000827,1.72e-17,25;CL:0002031,3.20e-17,120;CL:0000037,5.58e-17,168;CL:0002032,2.77e-16,161;CL:0000837,2.77e-16,161;CL:0002087,4.19e-16,115;CL:0000988,7.32e-16,177;CL:0000236,2.31e-10,14;CL:0000767,4.25e-09,3;CL:0000945,2.79e-08,24;CL:0000826,2.79e-08,24 | |||
|ontology_enrichment_development_v019=CL:0000790;7.31e-25;18!CL:0000051;4.91e-18;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.54e-09!102;UBERON:0003061!4.54e-09!102;UBERON:0002193!7.67e-09!112 | |ontology_enrichment_uberon=UBERON:0002390!4.54e-09!102;UBERON:0003061!4.54e-09!102;UBERON:0002193!7.67e-09!112 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0.246301768349837,0.0787107813136792,1.57345710739562,3.83829398097213,0.309632246632152,0,0,0,0,0,0,0,1.40381113229099,0.434021741431704,0,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0.411167888021826,0,0.28769239232215,0.768482119587302,0.236482229888585,0,0,0,0.188242339542605,0,0,0.612167784741805,0.320929027076094,0,0.989553900560148,0,0.426224750532694,0.290209238628584,0,0,0,0,0.434377689410233,0,0,0.632924774881769,0.422510572623884,0,0,0,0.150176892841506,0,0,0,0,3.51992488922645,0,0,0,0.800791974072025,1.14950487990897,0,0,1.70763890732835,1.76171156811282,1.14681968437569,0,0,0,0.196709770113833,1.17903228824749,1.23360899399706,0.668745981562712,0,0.473447805734733,0,3.00808233589969,0.589211814949674,0.443067789167242,2.16643091012012,0.896639238079726,2.47112760363769,0.328875809207352,1.10540007114339,0,0,0,0,0.566546713487831,0,1.03088233644789,1.51811815211702,1.27426165729639,1.30216690771284,0,0.752875595388864,0.255973222308837,1.24930726552346,1.18388626022008,0,3.62892137804518,1.60464117470104,2.02754165435919,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7945706610864,5.81119664487292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,4.53170748464433,2.80315847317372,3.85029108839245,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.862856803274467,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,0,0.476463550915578,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,5.63948020351398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.903017728242729,0,0,0.146552233678082,0,0,0,0,0,0.320362237703084,0,0.414239055347196,0,0,1.21792598380896,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0,0,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.657887425858975,0.257831551894309,0,0,0,0,0,0,0,0.157771562193185,0,0.436350690340377,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0.5388164241167,0.215166616178029,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0.246301768349837,0.0787107813136792,1.57345710739562,3.83829398097213,0.309632246632152,0,0,0,0,0,0,0,1.40381113229099,0.434021741431704,0,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0.411167888021826,0,0.28769239232215,0.768482119587302,0.236482229888585,0,0,0,0.188242339542605,0,0,0.612167784741805,0.320929027076094,0,0.989553900560148,0,0.426224750532694,0.290209238628584,0,0,0,0,0.434377689410233,0,0,0.632924774881769,0.422510572623884,0,0,0,0.150176892841506,0,0,0,0,3.51992488922645,0,0,0,0.800791974072025,1.14950487990897,0,0,1.70763890732835,1.76171156811282,1.14681968437569,0,0,0,0.196709770113833,1.17903228824749,1.23360899399706,0.668745981562712,0,0.473447805734733,0,3.00808233589969,0.589211814949674,0.443067789167242,2.16643091012012,0.896639238079726,2.47112760363769,0.328875809207352,1.10540007114339,0,0,0,0,0.566546713487831,0,1.03088233644789,1.51811815211702,1.27426165729639,1.30216690771284,0,0.752875595388864,0.255973222308837,1.24930726552346,1.18388626022008,0,3.62892137804518,1.60464117470104,2.02754165435919,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7945706610864,5.81119664487292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,4.53170748464433,2.80315847317372,3.85029108839245,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.862856803274467,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,0,0.476463550915578,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,5.63948020351398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.903017728242729,0,0,0.146552233678082,0,0,0,0,0,0.320362237703084,0,0.414239055347196,0,0,1.21792598380896,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0,0,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.657887425858975,0.257831551894309,0,0,0,0,0,0,0,0.157771562193185,0,0.436350690340377,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0.5388164241167,0.215166616178029,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p@chr4:151749436..151749449,- | |short_description=p@chr4:151749436..151749449,- | ||
}} | }} |
Latest revision as of 02:14, 30 July 2015
Short description: | p@chr4:151749436..151749449, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:151749436..151749449, - |
Coexpression cluster: | C662_Mast_CD8_Natural_Basophils_CD4_Peripheral_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 6.23e-33 | 52 |
lymphocyte | 3.07e-32 | 53 |
common lymphoid progenitor | 3.07e-32 | 53 |
CD8-positive, alpha-beta T cell | 1.88e-25 | 11 |
mature alpha-beta T cell | 7.46e-25 | 18 |
alpha-beta T cell | 7.46e-25 | 18 |
immature T cell | 7.46e-25 | 18 |
mature T cell | 7.46e-25 | 18 |
immature alpha-beta T cell | 7.46e-25 | 18 |
leukocyte | 4.36e-20 | 136 |
natural killer cell | 2.40e-19 | 3 |
pro-NK cell | 2.40e-19 | 3 |
T cell | 1.72e-17 | 25 |
pro-T cell | 1.72e-17 | 25 |
hematopoietic lineage restricted progenitor cell | 3.20e-17 | 120 |
hematopoietic stem cell | 5.58e-17 | 168 |
hematopoietic oligopotent progenitor cell | 2.77e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.77e-16 | 161 |
nongranular leukocyte | 4.19e-16 | 115 |
hematopoietic cell | 7.32e-16 | 177 |
B cell | 2.31e-10 | 14 |
basophil | 4.25e-09 | 3 |
lymphocyte of B lineage | 2.79e-08 | 24 |
pro-B cell | 2.79e-08 | 24 |