FFCP PHASE1:Hg19::chr4:149677484..149677487,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:149677484..149677487,- | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_at_chr4:149677484..149677487,- | |description=CAGE_peak_at_chr4:149677484..149677487,- | ||
|id=chr4:149677484..149677487,- | |id=chr4:149677484..149677487,- | ||
|ontology_enrichment_celltype=CL:1000507!5.65e-45!12;CL:1000494!5.65e-45!12;CL:1000449!1.28e-33!16;CL:1000497!7.90e-30!18;CL:0002518!7.90e-30!18;CL:0000239!4.30e-16!3;CL:1000615!4.30e-16!3;CL:0002306!4.30e-16!3;CL:0002681!3.80e-14!13;CL:0002584!3.80e-14!13;CL:0000319!2.46e-12!1;CL:0000066!9.86e-08!254;CL:1000415!5.41e-07!2;CL:0000159!8.52e-07!2 | |ontology_enrichment_celltype=CL:1000507!5.65e-45!12;CL:1000494!5.65e-45!12;CL:1000449!1.28e-33!16;CL:1000497!7.90e-30!18;CL:0002518!7.90e-30!18;CL:0000239!4.30e-16!3;CL:1000615!4.30e-16!3;CL:0002306!4.30e-16!3;CL:0002681!3.80e-14!13;CL:0002584!3.80e-14!13;CL:0000319!2.46e-12!1;CL:0000066!9.86e-08!254;CL:1000415!5.41e-07!2;CL:0000159!8.52e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:1000415;8.10e-26;2!CL:1000507;8.98e-21;10!CL:1000494;8.98e-21;10!CL:0000239;1.03e-17;3!CL:1000615;1.03e-17;3!CL:0002306;1.03e-17;3!CL:1000449;3.04e-14;15!CL:1000497;1.06e-12;17!CL:0002518;1.06e-12;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,9.18e-26,2;CL:1000507,8.54e-21,10;CL:1000494,8.54e-21,10;CL:0000239,9.46e-18,3;CL:1000615,9.46e-18,3;CL:0002306,9.46e-18,3;CL:1000449,2.94e-14,15;CL:1000497,1.03e-12,17;CL:0002518,1.03e-12,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3030!2.46e-12!1;DOID:1749!1.25e-07!14;DOID:4231!9.02e-07!2;DOID:1907!9.02e-07!2;DOID:4468!9.54e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr4:149677484..149677487,- | |short_description=p@chr4:149677484..149677487,- | ||
}} | }} |
Latest revision as of 02:09, 30 July 2015
Short description: | p@chr4:149677484..149677487, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:149677484..149677487, - |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 9.18e-26 | 2 |
kidney tubule cell | 8.54e-21 | 10 |
nephron tubule epithelial cell | 8.54e-21 | 10 |
brush border epithelial cell | 9.46e-18 | 3 |
kidney cortex tubule cell | 9.46e-18 | 3 |
epithelial cell of proximal tubule | 9.46e-18 | 3 |
epithelial cell of nephron | 2.94e-14 | 15 |
kidney cell | 1.03e-12 | 17 |
kidney epithelial cell | 1.03e-12 | 17 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 8.54e-21 | 10 |
renal cortex tubule | 9.46e-18 | 3 |
region of nephron tubule | 9.46e-18 | 3 |
proximal tubule | 9.46e-18 | 3 |
gallbladder | 1.12e-17 | 3 |
gall bladder primordium | 1.12e-17 | 3 |
nephron epithelium | 2.94e-14 | 15 |
renal tubule | 2.94e-14 | 15 |
nephron tubule | 2.94e-14 | 15 |
nephron | 2.94e-14 | 15 |
uriniferous tubule | 2.94e-14 | 15 |
nephrogenic mesenchyme | 2.94e-14 | 15 |
excretory tube | 1.95e-13 | 16 |
kidney epithelium | 1.95e-13 | 16 |
abdomen element | 3.93e-09 | 54 |
abdominal segment element | 3.93e-09 | 54 |
kidney | 1.11e-08 | 26 |
kidney mesenchyme | 1.11e-08 | 26 |
upper urinary tract | 1.11e-08 | 26 |
kidney rudiment | 1.11e-08 | 26 |
kidney field | 1.11e-08 | 26 |
abdominal segment of trunk | 2.64e-08 | 60 |
abdomen | 2.64e-08 | 60 |
cavitated compound organ | 1.92e-07 | 31 |
biliary system | 8.85e-07 | 9 |
biliary tree | 8.85e-07 | 9 |
biliary bud | 8.85e-07 | 9 |