FFCP PHASE1:Hg19::chr4:148461249..148461259,-: Difference between revisions
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|id=chr4:148461249..148461259,-
|short_description=p@chr4:148461249..148461259,-
|description=CAGE_peak_at_chr4:148461249..148461259,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:148461249..148461259,- | |||
|coexpression_cluster_id=C818 | |||
|description=CAGE_peak_at_chr4:148461249..148461259,- | |||
|id=chr4:148461249..148461259,- | |||
|ontology_enrichment_celltype=CL:0000080!1.21e-18!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.28e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.28e-07,25;CL:0000827,2.28e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4960!2.95e-13!1;DOID:0070004!2.95e-13!1 | |||
|ontology_enrichment_disease_v019=DOID:0060058;6.93e-17;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,6.93e-17,10 | |||
|ontology_enrichment_uberon=UBERON:0001950!1.65e-19!20;UBERON:0000200!7.52e-18!6;UBERON:0002619!8.62e-18!22;UBERON:0001869!1.43e-16!32;UBERON:0000956!1.05e-15!25;UBERON:0000203!1.05e-15!25;UBERON:0001893!1.36e-15!34;UBERON:0002902!5.38e-13!1;UBERON:0009899!5.38e-13!1;UBERON:0002780!6.71e-13!41;UBERON:0001890!6.71e-13!41;UBERON:0006240!6.71e-13!41;UBERON:0007190!7.68e-13!1;UBERON:0002581!8.64e-13!1;UBERON:0003080!1.38e-12!42;UBERON:0002791!6.15e-12!33;UBERON:0002020!1.38e-11!34;UBERON:0003528!1.38e-11!34;UBERON:0002331!2.00e-11!10;UBERON:0000358!2.00e-11!10;UBERON:0000307!2.00e-11!10;UBERON:0000091!2.00e-11!10;UBERON:0000087!2.00e-11!10;UBERON:0007806!2.00e-11!10;UBERON:0008780!2.00e-11!10;UBERON:0005728!2.00e-11!10;UBERON:0002021!2.35e-10!5;UBERON:0001872!3.12e-10!5;UBERON:0001049!3.56e-09!57;UBERON:0005068!3.56e-09!57;UBERON:0006241!3.56e-09!57;UBERON:0007135!3.56e-09!57;UBERON:0002616!7.56e-09!59;UBERON:0003056!1.53e-08!61;UBERON:0001017!5.51e-08!82;UBERON:0000178!8.66e-08!15;UBERON:0000179!8.66e-08!15;UBERON:0000463!8.66e-08!15;UBERON:0003075!1.11e-07!86;UBERON:0007284!1.11e-07!86;UBERON:0005743!1.39e-07!86;UBERON:0000955!2.23e-07!69;UBERON:0006238!2.23e-07!69;UBERON:0002346!2.65e-07!90;UBERON:0002360!3.28e-07!2;UBERON:0000094!3.28e-07!2;UBERON:0007645!3.28e-07!2;UBERON:0001870!5.60e-07!2;UBERON:0000073!8.52e-07!94;UBERON:0001016!8.52e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;3.88e-36;10!UBERON:0000178;1.93e-24;15!UBERON:0000179;1.93e-24;15!UBERON:0000463;1.93e-24;15!UBERON:0000478;1.25e-15;24!UBERON:0002390;4.88e-12;32!UBERON:0000922;6.45e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,3.88e-36,10;UBERON:0000358,3.88e-36,10;UBERON:0000307,3.88e-36,10;UBERON:0000091,3.88e-36,10;UBERON:0000087,3.88e-36,10;UBERON:0007010,3.88e-36,10;UBERON:0007806,3.88e-36,10;UBERON:0008780,3.88e-36,10;UBERON:0005728,3.88e-36,10;UBERON:0000178,1.93e-24,15;UBERON:0000179,1.93e-24,15;UBERON:0000463,1.93e-24,15;UBERON:0000478,1.25e-15,24 | |||
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|short_description=p@chr4:148461249..148461259,- | |||
}} | }} |
Latest revision as of 02:06, 30 July 2015
Short description: | p@chr4:148461249..148461259, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:148461249..148461259, - |
Coexpression cluster: | C818_adult_cord_hairy_anaplastic_mycosis_CD4_non |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.28e-07 | 25 |
pro-T cell | 2.28e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 3.88e-36 | 10 |
blastocyst | 3.88e-36 | 10 |
blastula | 3.88e-36 | 10 |
bilaminar disc | 3.88e-36 | 10 |
inner cell mass | 3.88e-36 | 10 |
cleaving embryo | 3.88e-36 | 10 |
connecting stalk | 3.88e-36 | 10 |
inner cell mass derived epiblast | 3.88e-36 | 10 |
extraembryonic mesoderm | 3.88e-36 | 10 |
blood | 1.93e-24 | 15 |
haemolymphatic fluid | 1.93e-24 | 15 |
organism substance | 1.93e-24 | 15 |
extraembryonic structure | 1.25e-15 | 24 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 6.93e-17 | 10 |