FFCP PHASE1:Hg19::chr4:14094655..14094663,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:14094655..14094663,+ | |||
|coexpression_cluster_id=C530 | |coexpression_cluster_id=C530 | ||
|description=CAGE_peak_at_chr4:14094655..14094663,+ | |description=CAGE_peak_at_chr4:14094655..14094663,+ | ||
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|ontology_enrichment_celltype=CL:0000197!3.77e-13!6;CL:0000098!3.77e-13!6;CL:0002167!3.77e-13!6;CL:0002603!2.63e-07!3;CL:0000708!2.79e-07!3 | |ontology_enrichment_celltype=CL:0000197!3.77e-13!6;CL:0000098!3.77e-13!6;CL:0002167!3.77e-13!6;CL:0002603!2.63e-07!3;CL:0000708!2.79e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002556;9.07e-18;6 | |ontology_enrichment_celltype_v019=CL:0002556;9.07e-18;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002556,9.07e-18,6 | |||
|ontology_enrichment_development_v019=UBERON:0007123;4.21e-21;5 | |ontology_enrichment_development_v019=UBERON:0007123;4.21e-21;5 | ||
|ontology_enrichment_disease=DOID:3112!8.95e-20!1 | |ontology_enrichment_disease=DOID:3112!8.95e-20!1 | ||
|ontology_enrichment_disease_v019=DOID:3112;9.37e-99;1 | |ontology_enrichment_disease_v019=DOID:3112;9.37e-99;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3112,9.37e-99,1 | |||
|ontology_enrichment_uberon=UBERON:0004733!4.13e-14!12;UBERON:0002028!4.13e-14!12;UBERON:0007277!4.13e-14!12;UBERON:0004732!4.47e-13!13;UBERON:0003076!2.03e-11!15;UBERON:0003057!2.03e-11!15;UBERON:0002148!2.27e-10!2;UBERON:0009662!2.27e-10!2;UBERON:0002298!6.06e-10!8;UBERON:0002680!5.64e-09!9;UBERON:0001895!5.64e-09!9;UBERON:0010092!5.64e-09!9;UBERON:0000988!2.47e-07!3;UBERON:0006331!2.47e-07!3;UBERON:0003210!2.79e-07!3;UBERON:0001896!2.97e-07!3;UBERON:0005290!2.97e-07!3;UBERON:0010096!2.97e-07!3 | |ontology_enrichment_uberon=UBERON:0004733!4.13e-14!12;UBERON:0002028!4.13e-14!12;UBERON:0007277!4.13e-14!12;UBERON:0004732!4.47e-13!13;UBERON:0003076!2.03e-11!15;UBERON:0003057!2.03e-11!15;UBERON:0002148!2.27e-10!2;UBERON:0009662!2.27e-10!2;UBERON:0002298!6.06e-10!8;UBERON:0002680!5.64e-09!9;UBERON:0001895!5.64e-09!9;UBERON:0010092!5.64e-09!9;UBERON:0000988!2.47e-07!3;UBERON:0006331!2.47e-07!3;UBERON:0003210!2.79e-07!3;UBERON:0001896!2.97e-07!3;UBERON:0005290!2.97e-07!3;UBERON:0010096!2.97e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;4.21e-21;5!UBERON:0001758;9.07e-18;6!UBERON:0003672;9.07e-18;6!UBERON:0003129;1.91e-15;7!UBERON:0011137;2.37e-10;11!UBERON:0010323;2.37e-10;11!UBERON:0000075;1.54e-07;16 | |ontology_enrichment_uberon_v019=UBERON:0002046;4.21e-21;5!UBERON:0001758;9.07e-18;6!UBERON:0003672;9.07e-18;6!UBERON:0003129;1.91e-15;7!UBERON:0011137;2.37e-10;11!UBERON:0010323;2.37e-10;11!UBERON:0000075;1.54e-07;16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,4.21e-21,5;UBERON:0004117,4.21e-21,5;UBERON:0007689,4.21e-21,5;UBERON:0007123,4.21e-21,5;UBERON:0003091,4.21e-21,5;UBERON:0001758,9.07e-18,6;UBERON:0003672,9.07e-18,6;UBERON:0003129,1.91e-15,7;UBERON:0009722,2.16e-10,11;UBERON:0007690,2.16e-10,11;UBERON:0010323,2.37e-10,11;UBERON:0011137,2.00e-08,14;UBERON:0000075,1.54e-07,16;UBERON:0008814,7.18e-07,18 | |||
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|short_description=p@chr4:14094655..14094663,+ | |short_description=p@chr4:14094655..14094663,+ | ||
}} | }} |
Latest revision as of 01:48, 30 July 2015
Short description: | p@chr4:14094655..14094663, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:14094655..14094663, + |
Coexpression cluster: | C530_papillary_salivary_skin_Smooth_leiomyoma_lung_Keratinocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of periodontium | 9.07e-18 | 6 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 4.21e-21 | 5 |
pharyngeal pouch | 4.21e-21 | 5 |
thyroid diverticulum | 4.21e-21 | 5 |
pharyngeal pouch 2 | 4.21e-21 | 5 |
thyroid primordium | 4.21e-21 | 5 |
periodontium | 9.07e-18 | 6 |
dentition | 9.07e-18 | 6 |
skull | 1.91e-15 | 7 |
entire pharyngeal arch endoderm | 2.16e-10 | 11 |
early pharyngeal endoderm | 2.16e-10 | 11 |
cranial skeletal system | 2.37e-10 | 11 |
axial skeletal system | 2.00e-08 | 14 |
subdivision of skeletal system | 1.54e-07 | 16 |
pharyngeal arch system | 7.18e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 9.37e-99 | 1 |