FFCP PHASE1:Hg19::chr4:110964002..110964007,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:110964002..110964007,- | |||
|description=CAGE_peak_at_chr4:110964002..110964007,- | |description=CAGE_peak_at_chr4:110964002..110964007,- | ||
|id=chr4:110964002..110964007,- | |id=chr4:110964002..110964007,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002127;2.12e-08;1!CL:0000911;2.12e-08;1!CL:0002553;2.12e-08;1!CL:0002379;2.12e-08;1!CL:0000814;2.12e-08;1 | |ontology_enrichment_celltype_v019=CL:0002127;2.12e-08;1!CL:0000911;2.12e-08;1!CL:0002553;2.12e-08;1!CL:0002379;2.12e-08;1!CL:0000814;2.12e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.27e-08,1;CL:0002379,2.84e-08,1;CL:0002127,3.28e-08,1;CL:0000914,3.28e-08,1;CL:0000911,3.28e-08,1;CL:0000814,3.28e-08,1;CL:0002042,3.28e-08,1;CL:0002039,3.28e-08,1;CL:0002040,3.28e-08,1;CL:0002041,3.28e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;7.83e-09;1!UBERON:0008425;2.12e-08;1 | |ontology_enrichment_development_v019=UBERON:0000358;7.83e-09;1!UBERON:0008425;2.12e-08;1 | ||
|ontology_enrichment_disease=DOID:162!5.73e-23!235;DOID:14566!8.71e-22!239;DOID:0050687!1.34e-20!143;DOID:305!1.11e-14!106;DOID:0050686!7.26e-11!137;DOID:3095!7.42e-07!22;DOID:2994!7.42e-07!22 | |ontology_enrichment_disease=DOID:162!5.73e-23!235;DOID:14566!8.71e-22!239;DOID:0050687!1.34e-20!143;DOID:305!1.11e-14!106;DOID:0050686!7.26e-11!137;DOID:3095!7.42e-07!22;DOID:2994!7.42e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:8692;8.52e-14;31!DOID:1240;1.03e-11;39!DOID:2531;4.31e-11;51!DOID:0060083;4.31e-11;51!DOID:9119;7.83e-09;1!DOID:8552;7.83e-09;1!DOID:4960;2.12e-08;1!DOID:3620;2.12e-08;1!DOID:0070004;2.12e-08;1!DOID:3565;2.12e-08;1 | |ontology_enrichment_disease_v019=DOID:8692;8.52e-14;31!DOID:1240;1.03e-11;39!DOID:2531;4.31e-11;51!DOID:0060083;4.31e-11;51!DOID:9119;7.83e-09;1!DOID:8552;7.83e-09;1!DOID:4960;2.12e-08;1!DOID:3620;2.12e-08;1!DOID:0070004;2.12e-08;1!DOID:3565;2.12e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,3.99e-18,51;DOID:0060083,3.99e-18,51;DOID:1240,6.57e-17,39;DOID:8692,5.42e-14,31;DOID:0050686,2.18e-13,137;DOID:162,6.46e-12,235;DOID:14566,1.40e-11,239;DOID:9119,6.50e-09,1;DOID:8552,7.01e-09,1;DOID:4960,2.64e-08,1;DOID:0070004,2.64e-08,1;DOID:3620,2.84e-08,1;DOID:3565,2.84e-08,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000997;2.12e-08;1!UBERON:0005056;2.12e-08;1!UBERON:0004176;2.12e-08;1 | |ontology_enrichment_uberon_v019=UBERON:0000997;2.12e-08;1!UBERON:0005056;2.12e-08;1!UBERON:0004176;2.12e-08;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,3.79e-08,1;UBERON:0005056,3.79e-08,1 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.251085279189606,0.305653622991805,0.164201178899891,0.314843125254717,0,0.383829398097213,0,0,0,0,0.0774672005803016,1.27952309238679,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0.384273959177026,0,1.31550323682941,0.552700035571697,0,0.444859689486181,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0.245668634623536,0,0,0,0,0,0.336672227908132,0.250237039743928,0,0,0,0,0,0.358779271377724,0,0,0,0,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0.72995471815166,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0.492663237895943,0.176096868026452,0,0.144119953416961,0,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,1.12085143993527,0,0.646882724578552,0,1.01637849688985,0,1.54657762555539,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0.173767228936166,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0.274537029736055,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0.569647187174163,0.238231775457789,0,0.648473311192717,0,0,0.106824071127473,0.962479855263359,0.245040215981032,0.371606350251437,0,1.42283686696828,0,0.199579371432817,0,2.32840940996271,0,0.842391534340376,0,0,0,0.50787533340481,0,0,2.12923118845163,2.06103206853459,0,0,0,0.19538809540204,0,1.23087398947712,0,2.66457574398256,0,0,0,0,0,0,0.23874448473769,0.593929361665277,0,0,0,0.111308705022906,0.16480387422676,0.211125408127993,0,0,1.76352923497993,2.65898574505602,0.369254416383208,0,0.808815160325942,0.358042349351218,0,0,0,0,0,0,0,0,1.31189999994294,0,0.1137934482855,0,0,0.689486746482929,0.291604613383254,0.347249989866585,0,0.120596438625408,0,0,0,0,0,0,0,0.797594390929008,0,0.628303510868405,0,0,0,0,0,0.156980256395025,2.6593869104025,0,0,0,0.189753732724185,1.74830236878417,0,0.163232808159148,0,0.216388639742091,0,0,0,0.889563386041866,0,0,0,0,0,0.182454789215666,0.19566461893209,0,0,0,0.30607276163049,0,0,0.103688191397247,0,0,0.313932918407225,0,0.569219092059585,0.138674673013139,0.173559738335131,1.07791637155815,0,0,0,0,0,0.0821154570532092,0,0.353024506766001,0,0.548167698587004,0,0,0.391102765469606,0.961905843018405,0,0.19980960958213,0,0.229073192331831,0.171594997861965,0.14405479798815,0.621262677827163,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0.482259445395058,0,0.415440338029185,0,0,0,0,0,0,0.316801009558219,0.179287339332845,0.383830394638891,0,0,0.25426853765475,0,0,0,0,1.31348033198942,0.511164065356265,0,0,0,0,0,0.513260513652988,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0.327872630709804,0.157054096250234,0,0,0,0,0,0,0,0,0,0,1.17632909849086,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0.163565394255844,1.31043939538565,0.737318726261158,0.422624246717254,0,0.426766918776564,1.20550485762571,1.13503190713367,0,0,0,0,0.323474434190045,0.157265941855896,0.54604819096007,0.509197589862076,3.18862380152524,0.123935764259002,0,0,0.23658523500376,1.60114149657094,0.352675943690684,0,0,0,0,0.205116364240755,0,0,0,0,0.392590874004102,0.471878893390961,0,0.231051332300676,0.381382095467167,0.690359926060101,0.397832444232549,0,0,0,0.261906694481422,0,0.591424344868181,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0,0.460935950223117,0.514464028312255,0,0.131545547125698,0,0,0,0,0,0,0.863710364874486,0,0.0714765441766563,0,0.929931402945002,2.78173235684127,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0,0,0,0,0.485710993059139,0.935757853848423,0.397901550322736,0,0.90356865631168,0.109940516745429,0.905777061400041,0,0.218559560503957,0.470317296361523,0,0.235676547101626,0.196308467114945,0,0,0.169927114687817,0,0,0.799529247399431,0.178553938605658,0.7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| ||
|short_description=p@chr4:110964002..110964007,- | |short_description=p@chr4:110964002..110964007,- | ||
}} | }} |
Latest revision as of 00:53, 30 July 2015
Short description: | p@chr4:110964002..110964007, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:110964002..110964007, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.27e-08 | 1 |
meningothelial cell | 2.84e-08 | 1 |
innate effector T cell | 3.28e-08 | 1 |
immature NK T cell | 3.28e-08 | 1 |
effector T cell | 3.28e-08 | 1 |
mature NK T cell | 3.28e-08 | 1 |
immature NK T cell stage IV | 3.28e-08 | 1 |
immature NK T cell stage I | 3.28e-08 | 1 |
immature NK T cell stage II | 3.28e-08 | 1 |
immature NK T cell stage III | 3.28e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 3.79e-08 | 1 |
external female genitalia | 3.79e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.99e-18 | 51 |
immune system cancer | 3.99e-18 | 51 |
leukemia | 6.57e-17 | 39 |
myeloid leukemia | 5.42e-14 | 31 |
organ system cancer | 2.18e-13 | 137 |
cancer | 6.46e-12 | 235 |
disease of cellular proliferation | 1.40e-11 | 239 |
acute myeloid leukemia | 6.50e-09 | 1 |
chronic myeloid leukemia | 7.01e-09 | 1 |
bone marrow cancer | 2.64e-08 | 1 |
myeloma | 2.64e-08 | 1 |
central nervous system cancer | 2.84e-08 | 1 |
meningioma | 2.84e-08 | 1 |