FFCP PHASE1:Hg19::chr4:103506219..103506228,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:103506219..103506228,+ | |||
|coexpression_cluster_id=C621 | |||
|description=CAGE_peak_at_chr4:103506219..103506228,+ | |description=CAGE_peak_at_chr4:103506219..103506228,+ | ||
|id=chr4:103506219..103506228,+ | |id=chr4:103506219..103506228,+ | ||
|ontology_enrichment_celltype=CL:0000738!7.58e-27!140;CL:0002057!3.37e-26!42;CL:0000860!1.03e-23!45;CL:0000988!1.19e-20!182;CL:0000037!1.73e-20!172;CL:0000566!1.73e-20!172;CL:0002087!1.80e-20!119;CL:0002031!6.87e-20!124;CL:0002032!1.91e-18!165;CL:0000837!1.91e-18!165;CL:0000766!8.16e-16!76;CL:0000557!3.69e-15!71;CL:0002009!4.00e-15!65;CL:0002194!1.39e-13!63;CL:0000576!1.39e-13!63;CL:0000040!1.39e-13!63;CL:0000559!1.39e-13!63;CL:0000839!2.54e-13!70;CL:0000763!4.83e-12!112;CL:0000049!4.83e-12!112 | |ontology_enrichment_celltype=CL:0000738!7.58e-27!140;CL:0002057!3.37e-26!42;CL:0000860!1.03e-23!45;CL:0000988!1.19e-20!182;CL:0000037!1.73e-20!172;CL:0000566!1.73e-20!172;CL:0002087!1.80e-20!119;CL:0002031!6.87e-20!124;CL:0002032!1.91e-18!165;CL:0000837!1.91e-18!165;CL:0000766!8.16e-16!76;CL:0000557!3.69e-15!71;CL:0002009!4.00e-15!65;CL:0002194!1.39e-13!63;CL:0000576!1.39e-13!63;CL:0000040!1.39e-13!63;CL:0000559!1.39e-13!63;CL:0000839!2.54e-13!70;CL:0000763!4.83e-12!112;CL:0000049!4.83e-12!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.50e-42;33!CL:0002057;3.50e-42;33!CL:0000473;2.23e-30;39!CL:0000234;2.23e-30;39!CL:0000576;1.76e-26;48!CL:0000623;9.90e-20;3!CL:0000766;4.95e-19;69!CL:0002087;7.20e-18;104!CL:0002393;1.27e-10;6!CL:0002397;1.27e-10;6!CL:0000738;4.73e-09;136!CL:0000763;6.09e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.13e-52,42;CL:0002057,4.13e-52,42;CL:0000473,3.99e-45,48;CL:0000234,3.99e-45,48;CL:0002087,4.75e-39,115;CL:0002031,3.11e-37,120;CL:0002194,2.42e-35,59;CL:0000576,2.42e-35,59;CL:0000040,2.42e-35,59;CL:0000559,2.42e-35,59;CL:0000738,5.53e-35,136;CL:0002009,4.44e-34,61;CL:0000766,1.11e-31,72;CL:0000839,2.99e-31,66;CL:0000557,9.79e-31,67;CL:0002032,8.17e-29,161;CL:0000837,8.17e-29,161;CL:0000037,2.06e-27,168;CL:0000988,9.01e-26,177;CL:0000763,6.87e-20,108;CL:0000049,6.87e-20,108;CL:0000623,7.40e-20,3;CL:0000825,7.40e-20,3;CL:0000134,2.48e-10,354;CL:0002320,4.99e-10,361;CL:0000219,5.84e-09,386;CL:0000034,6.18e-09,441;CL:0000838,1.12e-08,52;CL:0000048,1.66e-08,427;CL:0000542,1.74e-08,53;CL:0000051,1.74e-08,53;CL:0000723,2.59e-08,433;CL:0002393,3.08e-07,9;CL:0002397,3.08e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.54e-36;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.10e-13!102;UBERON:0003061!2.10e-13!102;UBERON:0002371!3.85e-13!80;UBERON:0001474!3.20e-12!86;UBERON:0002193!6.47e-12!112;UBERON:0002405!4.65e-09!115;UBERON:0004765!7.22e-09!101;UBERON:0001434!7.22e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.07e-26,76;UBERON:0001474,1.73e-24,82;UBERON:0004765,5.35e-22,90;UBERON:0002405,3.57e-21,93;UBERON:0002390,6.55e-20,98;UBERON:0003061,6.55e-20,98;UBERON:0001434,1.94e-19,100;UBERON:0002193,9.91e-18,108;UBERON:0002204,3.71e-10,167;UBERON:0002384,1.29e-09,371;UBERON:0003081,1.07e-07,203 | |||
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| ||
|short_description=p@chr4:103506219..103506228,+ | |short_description=p@chr4:103506219..103506228,+ | ||
}} | }} |
Latest revision as of 00:31, 30 July 2015
Short description: | p@chr4:103506219..103506228, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:103506219..103506228, + |
Coexpression cluster: | C621_Neutrophils_CD14_CD4_CD8_Natural_CD19_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.07e-26 | 76 |
bone element | 1.73e-24 | 82 |
skeletal element | 5.35e-22 | 90 |
immune system | 3.57e-21 | 93 |
hematopoietic system | 6.55e-20 | 98 |
blood island | 6.55e-20 | 98 |
skeletal system | 1.94e-19 | 100 |
hemolymphoid system | 9.91e-18 | 108 |
musculoskeletal system | 3.71e-10 | 167 |
connective tissue | 1.29e-09 | 371 |
lateral plate mesoderm | 1.07e-07 | 203 |