FFCP PHASE1:Hg19::chr3:70014473..70014515,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:70014473..70014515,+ | |||
|description=CAGE_peak_at_chr3:70014473..70014515,+ | |||
|id=chr3:70014473..70014515,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000147;3.13e-39;14!CL:0000148;1.78e-35;10!CL:0002566;1.67e-23;1!CL:0000149;5.74e-23;4!CL:0000710;5.08e-18;20!CL:0000075;1.81e-13;27!CL:0002077;1.07e-10;34!CL:0002567;1.30e-08;3!CL:0002586;1.30e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000147,2.89e-39,14;CL:0000148,1.37e-35,10;CL:0000541,1.37e-35,10;CL:0002566,1.34e-23,1;CL:0000149,7.18e-23,4;CL:0000710,4.45e-18,20;CL:0000075,1.64e-13,27;CL:0002077,8.16e-11,34;CL:0000333,1.26e-08,41;CL:0002567,1.30e-08,3;CL:0002586,1.51e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;1.48e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.48e-12,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;1.30e-08;3!UBERON:0001782;1.30e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,1.51e-08,3;UBERON:0005424,1.51e-08,3 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0,0,0,0.929119112685311,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.869079113764942,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0.324547393654683,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.220587945464788,0,0,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,0.468008530278475,0.445893486866185,0,0,0,0.0895585227028483,0,0,0.985326475791887,0.088048434013226,0,0.144119953416961,0.25248486685276,2.85740524314761,0,1.17217447210047,0,0.925447434329912,2.70308752059526,1.71495859578347,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.623912584592421,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.256278298511402,0.511707249066704,0,0,0,0,0,0,0,0,0,0.184161977871793,0.459257792658427,0.546273504020151,0.524497659837696,0,0.616122696835318,0,0,0.422206515571503,0,0,0.431831832204279,0,0,0,0.509752546090077,0,0.223874754722178,0,0,1.02580050046556,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0.21787692703798,0.139423744278603,0.384751292518985,0,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0,0,0,0.189753732724185,0,0.210998064528027,0.163232808159148,0,0.216388639742091,0,0.0884575645033392,0,0.296521128680622,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0.173559738335131,0,0,0,0.171986032471617,0.19351266257817,0.0730893170861856,0.164230914106418,0,0,0.451961481561065,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0.271808412147228,0.313808538937,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0.612691153526923,0,0,0,0.244052529803926,0,0.573409195690071,0,0,0,0,0.909894705249887,3.71104933608458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0,0,0,0,0,1.53744911152768,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0.172214979660816,0,0.184105950251841,0,0,0,0,0.157265941855896,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0.3062454773532,0,0,0,0.205116364240755,0,0,0.322951291263702,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0.131545547125698,0.236387681767936,0,0,0,0,0,0.215927591218621,0,0.142953088353313,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0.447421727191169,0,0.121917924982269,0,0.205325613712494,0,0,0.233939463462106,0,0.237840181555137,0,0,0,0.154348316215889,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0.250707539292375,0,0,0,0.20686599172379,0,0.23806443146374,0,0,0.112131862580613,0.0636471582781649,0.202117188958219,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0,0,0,0.929119112685311,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.869079113764942,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0.324547393654683,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.220587945464788,0,0,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.246217006087397,0.468008530278475,0.445893486866185,0,0,0,0.0895585227028483,0,0,0.985326475791887,0.088048434013226,0,0.144119953416961,0.25248486685276,2.85740524314761,0,1.17217447210047,0,0.925447434329912,2.70308752059526,1.71495859578347,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.623912584592421,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.256278298511402,0.511707249066704,0,0,0,0,0,0,0,0,0,0.184161977871793,0.459257792658427,0.546273504020151,0.524497659837696,0,0.616122696835318,0,0,0.422206515571503,0,0,0.431831832204279,0,0,0,0.509752546090077,0,0.223874754722178,0,0,1.02580050046556,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0.21787692703798,0.139423744278603,0.384751292518985,0,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0,0,0,0.189753732724185,0,0.210998064528027,0.163232808159148,0,0.216388639742091,0,0.0884575645033392,0,0.296521128680622,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0.173559738335131,0,0,0,0.171986032471617,0.19351266257817,0.0730893170861856,0.164230914106418,0,0,0.451961481561065,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0.271808412147228,0.313808538937,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0.612691153526923,0,0,0,0.244052529803926,0,0.573409195690071,0,0,0,0,0.909894705249887,3.71104933608458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0,0,0,0,0,1.53744911152768,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0.172214979660816,0,0.184105950251841,0,0,0,0,0.157265941855896,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0.3062454773532,0,0,0,0.205116364240755,0,0,0.322951291263702,0,0,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0.131545547125698,0.236387681767936,0,0,0,0,0,0.215927591218621,0,0.142953088353313,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0.447421727191169,0,0.121917924982269,0,0.205325613712494,0,0,0.233939463462106,0,0.237840181555137,0,0,0,0.154348316215889,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0.250707539292375,0,0,0,0.20686599172379,0,0.23806443146374,0,0,0.112131862580613,0.0636471582781649,0.202117188958219,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr3:70014473..70014515,+ | |||
}} | }} |
Latest revision as of 23:24, 29 July 2015
Short description: | p@chr3:70014473..70014515, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:70014473..70014515, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 2.89e-39 | 14 |
melanocyte | 1.37e-35 | 10 |
melanoblast | 1.37e-35 | 10 |
dark melanocyte | 1.34e-23 | 1 |
visual pigment cell | 7.18e-23 | 4 |
neurecto-epithelial cell | 4.45e-18 | 20 |
columnar/cuboidal epithelial cell | 1.64e-13 | 27 |
ecto-epithelial cell | 8.16e-11 | 34 |
migratory neural crest cell | 1.26e-08 | 41 |
light melanocyte | 1.30e-08 | 3 |
retinal pigment epithelial cell | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 1.51e-08 | 3 |
presumptive retinal pigmented epithelium | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.48e-12 | 2 |