FFCP PHASE1:Hg19::chr3:54660709..54660712,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:54660709..54660712,- | |||
|coexpression_cluster_id=C383 | |||
|description=CAGE_peak_at_chr3:54660709..54660712,- | |description=CAGE_peak_at_chr3:54660709..54660712,- | ||
|id=chr3:54660709..54660712,- | |id=chr3:54660709..54660712,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002251;2.29e-11;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,2.29e-11,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1749;1.43e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.43e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0005418!6.47e-17!1;UBERON:0001389!6.47e-17!1;UBERON:0000026!6.47e-17!1;UBERON:0008784!6.47e-17!1;UBERON:0006058!6.47e-17!1;UBERON:0003663!6.47e-17!1;UBERON:0001383!6.47e-17!1;UBERON:0004256!6.47e-17!1;UBERON:0002529!6.47e-17!1;UBERON:0004708!6.47e-17!1;UBERON:0002101!6.47e-17!1;UBERON:0004709!6.47e-17!1;UBERON:0003661!6.47e-17!1;UBERON:0002471!6.47e-17!1;UBERON:0004357!6.47e-17!1;UBERON:0009872!6.47e-17!1;UBERON:0004347!6.47e-17!1;UBERON:0005420!6.47e-17!1;UBERON:0005732!6.47e-17!1;UBERON:0006057!6.47e-17!1;UBERON:0000978!6.47e-17!1;UBERON:0002103!6.47e-17!1;UBERON:0001665!6.47e-17!1;UBERON:0003823!6.47e-17!1;UBERON:0000154!6.47e-17!1;UBERON:0005733!6.47e-17!1;UBERON:0005730!6.47e-17!1;UBERON:0001630!4.02e-09!2;UBERON:0005090!4.02e-09!2 | |ontology_enrichment_uberon=UBERON:0005418!6.47e-17!1;UBERON:0001389!6.47e-17!1;UBERON:0000026!6.47e-17!1;UBERON:0008784!6.47e-17!1;UBERON:0006058!6.47e-17!1;UBERON:0003663!6.47e-17!1;UBERON:0001383!6.47e-17!1;UBERON:0004256!6.47e-17!1;UBERON:0002529!6.47e-17!1;UBERON:0004708!6.47e-17!1;UBERON:0002101!6.47e-17!1;UBERON:0004709!6.47e-17!1;UBERON:0003661!6.47e-17!1;UBERON:0002471!6.47e-17!1;UBERON:0004357!6.47e-17!1;UBERON:0009872!6.47e-17!1;UBERON:0004347!6.47e-17!1;UBERON:0005420!6.47e-17!1;UBERON:0005732!6.47e-17!1;UBERON:0006057!6.47e-17!1;UBERON:0000978!6.47e-17!1;UBERON:0002103!6.47e-17!1;UBERON:0001665!6.47e-17!1;UBERON:0003823!6.47e-17!1;UBERON:0000154!6.47e-17!1;UBERON:0005733!6.47e-17!1;UBERON:0005730!6.47e-17!1;UBERON:0001630!4.02e-09!2;UBERON:0005090!4.02e-09!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0003343;3.10e-50;4!UBERON:0004785;3.10e-50;4!UBERON:0000974;4.27e-34;6!UBERON:0003729;1.21e-16;13!UBERON:0000161;6.95e-12;19!UBERON:0000166;6.95e-12;19!UBERON:0000344;2.29e-11;20!UBERON:0000165;1.52e-08;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,3.10e-50,4;UBERON:0004785,3.10e-50,4;UBERON:0000974,3.81e-21,10;UBERON:0003729,1.21e-16,13;UBERON:0000344,2.29e-11,20;UBERON:0000166,1.80e-10,22;UBERON:0000165,2.67e-08,29;UBERON:0000930,2.67e-08,29;UBERON:0000161,5.81e-07,36 | |||
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|short_description=p@chr3:54660709..54660712,- | |short_description=p@chr3:54660709..54660712,- | ||
}} | }} |
Latest revision as of 22:41, 29 July 2015
Short description: | p@chr3:54660709..54660712, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:54660709..54660712, - |
Coexpression cluster: | C383_oral_liposarcoma_small_Small_skeletal_amniotic_Astrocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 2.29e-11 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 3.10e-50 | 4 |
respiratory system mucosa | 3.10e-50 | 4 |
neck | 3.81e-21 | 10 |
mouth mucosa | 1.21e-16 | 13 |
mucosa | 2.29e-11 | 20 |
oral opening | 1.80e-10 | 22 |
mouth | 2.67e-08 | 29 |
stomodeum | 2.67e-08 | 29 |
orifice | 5.81e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.43e-15 | 14 |