FFCP PHASE1:Hg19::chr3:46412794..46412814,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:46412794..46412814,- | |||
|coexpression_cluster_id=C392 | |||
|description=CAGE_peak_at_chr3:46412794..46412814,- | |description=CAGE_peak_at_chr3:46412794..46412814,- | ||
|id=chr3:46412794..46412814,- | |id=chr3:46412794..46412814,- | ||
|ontology_enrichment_celltype=CL:0002009!1.70e-58!65;CL:0002194!4.28e-56!63;CL:0000576!4.28e-56!63;CL:0000040!4.28e-56!63;CL:0000559!4.28e-56!63;CL:0000557!5.22e-52!71;CL:0000766!1.58e-51!76;CL:0002057!3.80e-49!42;CL:0000839!1.01e-48!70;CL:0000860!6.43e-45!45;CL:0000738!1.16e-39!140;CL:0002087!7.53e-38!119;CL:0002031!1.56e-35!124;CL:0000763!1.49e-34!112;CL:0000049!1.49e-34!112;CL:0000037!2.26e-31!172;CL:0000566!2.26e-31!172;CL:0000988!2.26e-28!182;CL:0002032!6.59e-28!165;CL:0000837!6.59e-28!165;CL:0000840!3.27e-09!5;CL:0001029!3.27e-09!5;CL:0000451!4.12e-08!10 | |ontology_enrichment_celltype=CL:0002009!1.70e-58!65;CL:0002194!4.28e-56!63;CL:0000576!4.28e-56!63;CL:0000040!4.28e-56!63;CL:0000559!4.28e-56!63;CL:0000557!5.22e-52!71;CL:0000766!1.58e-51!76;CL:0002057!3.80e-49!42;CL:0000839!1.01e-48!70;CL:0000860!6.43e-45!45;CL:0000738!1.16e-39!140;CL:0002087!7.53e-38!119;CL:0002031!1.56e-35!124;CL:0000763!1.49e-34!112;CL:0000049!1.49e-34!112;CL:0000037!2.26e-31!172;CL:0000566!2.26e-31!172;CL:0000988!2.26e-28!182;CL:0002032!6.59e-28!165;CL:0000837!6.59e-28!165;CL:0000840!3.27e-09!5;CL:0001029!3.27e-09!5;CL:0000451!4.12e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.41e-81;39!CL:0000234;1.41e-81;39!CL:0000860;4.88e-79;33!CL:0002057;4.88e-79;33!CL:0000576;1.56e-51;48!CL:0000766;7.06e-35;69!CL:0000235;2.38e-21;6!CL:0000763;1.10e-20;100!CL:0000451;5.06e-14;10!CL:0000738;6.20e-14;136!CL:0000840;9.80e-14;5!CL:0002087;1.15e-11;104!CL:0000784;1.09e-10;3!CL:0000990;4.53e-09;8!CL:0000219;3.32e-07;193!CL:0000988;4.73e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.63e-103,61;CL:0002194,2.53e-102,59;CL:0000576,2.53e-102,59;CL:0000040,2.53e-102,59;CL:0000559,2.53e-102,59;CL:0000473,8.22e-96,48;CL:0000234,8.22e-96,48;CL:0000557,1.84e-93,67;CL:0000839,1.47e-90,66;CL:0000766,2.31e-90,72;CL:0000860,2.04e-76,42;CL:0002057,2.04e-76,42;CL:0000763,1.10e-62,108;CL:0000049,1.10e-62,108;CL:0000738,2.26e-52,136;CL:0002087,2.03e-50,115;CL:0002031,2.23e-50,120;CL:0000037,2.70e-42,168;CL:0002032,1.44e-40,161;CL:0000837,1.44e-40,161;CL:0000988,1.35e-39,177;CL:0000235,2.90e-21,6;CL:0000134,2.79e-14,354;CL:0000451,4.53e-14,10;CL:0000840,6.46e-14,5;CL:0001029,6.46e-14,5;CL:0002320,8.66e-14,361;CL:0000219,4.70e-12,386;CL:0000784,1.25e-10,3;CL:0000048,6.16e-10,427;CL:0000723,1.21e-09,433;CL:0000034,2.87e-09,441;CL:0000990,3.46e-09,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.20e-57;42!CL:0000049;1.82e-18;108!UBERON:0006241;1.09e-10;3!UBERON:0003057;1.09e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.78e-50!102;UBERON:0003061!1.78e-50!102;UBERON:0002371!7.04e-46!80;UBERON:0002193!1.76e-45!112;UBERON:0001474!2.16e-41!86;UBERON:0002405!9.45e-35!115;UBERON:0004765!7.52e-34!101;UBERON:0001434!7.52e-34!101;UBERON:0007023!7.91e-21!115;UBERON:0001049!1.51e-17!57;UBERON:0005068!1.51e-17!57;UBERON:0006241!1.51e-17!57;UBERON:0007135!1.51e-17!57;UBERON:0003081!4.79e-15!216;UBERON:0002204!1.11e-13!167;UBERON:0002616!9.55e-13!59;UBERON:0002780!6.87e-12!41;UBERON:0001890!6.87e-12!41;UBERON:0006240!6.87e-12!41;UBERON:0003080!1.84e-11!42;UBERON:0002020!2.50e-11!34;UBERON:0003528!2.50e-11!34;UBERON:0001893!2.63e-11!34;UBERON:0001017!9.18e-11!82;UBERON:0005743!1.46e-10!86;UBERON:0002791!1.58e-10!33;UBERON:0000955!2.46e-10!69;UBERON:0006238!2.46e-10!69;UBERON:0003075!5.10e-10!86;UBERON:0007284!5.10e-10!86;UBERON:0001869!1.13e-09!32;UBERON:0002346!3.51e-09!90;UBERON:0000073!1.01e-08!94;UBERON:0001016!1.01e-08!94;UBERON:0002619!3.10e-08!22;UBERON:0000062!5.19e-08!511;UBERON:0002298!8.09e-08!8;UBERON:0003076!1.16e-07!15;UBERON:0003057!1.16e-07!15;UBERON:0000956!6.59e-07!25;UBERON:0000203!6.59e-07!25;UBERON:0003056!9.09e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;1.09e-10;3!UBERON:0005174;1.09e-10;3!UBERON:0001137;1.09e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.54e-81,76;UBERON:0001474,1.09e-74,82;UBERON:0004765,3.31e-67,90;UBERON:0002405,9.94e-65,93;UBERON:0002390,6.22e-61,98;UBERON:0003061,6.22e-61,98;UBERON:0001434,1.61e-59,100;UBERON:0002193,2.20e-54,108;UBERON:0002204,1.30e-31,167;UBERON:0003081,3.42e-24,203;UBERON:0002384,4.07e-13,371;UBERON:0000926,5.85e-12,315;UBERON:0004120,5.85e-12,315;UBERON:0006603,5.85e-12,315;UBERON:0002240,9.18e-11,3;UBERON:0005174,9.18e-11,3;UBERON:0001137,9.18e-11,3 | |||
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|short_description=p@chr3:46412794..46412814,- | |short_description=p@chr3:46412794..46412814,- | ||
}} | }} |
Latest revision as of 21:23, 29 July 2015
Short description: | p@chr3:46412794..46412814, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:46412794..46412814, - |
Coexpression cluster: | C392_Monocytederived_CD14_Macrophage_CD14CD16_Dendritic_Eosinophils_migratory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.54e-81 | 76 |
bone element | 1.09e-74 | 82 |
skeletal element | 3.31e-67 | 90 |
immune system | 9.94e-65 | 93 |
hematopoietic system | 6.22e-61 | 98 |
blood island | 6.22e-61 | 98 |
skeletal system | 1.61e-59 | 100 |
hemolymphoid system | 2.20e-54 | 108 |
musculoskeletal system | 1.30e-31 | 167 |
lateral plate mesoderm | 3.42e-24 | 203 |
connective tissue | 4.07e-13 | 371 |
mesoderm | 5.85e-12 | 315 |
mesoderm-derived structure | 5.85e-12 | 315 |
presumptive mesoderm | 5.85e-12 | 315 |
spinal cord | 9.18e-11 | 3 |
dorsal region element | 9.18e-11 | 3 |
dorsum | 9.18e-11 | 3 |