FFCP PHASE1:Hg19::chr3:45267139..45267195,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:45267139..45267195,-
|short_description=p1@ENST00000325090
|description=CAGE_peak_1_at_ENST00000325090_5end
|association_with_transcript=323bp_to_ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=323bp_to_ENST00000325090_5end | |||
|cluster_id=chr3:45267139..45267195,- | |||
|coexpression_cluster_id=C4330 | |||
|description=CAGE_peak_1_at_ENST00000325090_5end | |||
|id=chr3:45267139..45267195,- | |||
|ontology_enrichment_celltype=CL:0000393!2.01e-23!60;CL:0000211!2.01e-23!60;CL:0000192!1.72e-21!42;CL:0000514!1.72e-21!42;CL:0000055!5.76e-21!180;CL:0000187!3.23e-20!54;CL:0000680!6.89e-20!57;CL:0000056!6.89e-20!57;CL:0000355!6.89e-20!57;CL:0000183!7.73e-19!59;CL:0000359!2.57e-18!32;CL:0000222!4.61e-11!119;CL:0002539!4.79e-09!10;CL:0002321!7.22e-08!248;CL:0000220!1.37e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.58e-30;32!CL:0000192;2.30e-22;43!CL:0002539;2.42e-16;10!CL:0002595;1.84e-12;5!CL:0000187;9.19e-12;55!CL:0000393;1.67e-10;61!CL:0000211;1.67e-10;61!CL:0002582;4.71e-08;3!CL:0000346;1.09e-07;3!CL:1000428;1.09e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.37e-31,32;CL:0000192,2.44e-28,43;CL:0000514,2.44e-28,43;CL:0000187,3.02e-24,55;CL:0000393,8.78e-23,61;CL:0000211,8.78e-23,61;CL:0000680,1.46e-22,58;CL:0000056,1.46e-22,58;CL:0000355,1.46e-22,58;CL:0002539,1.28e-16,10;CL:0002595,1.97e-12,5;CL:0000048,6.13e-10,427;CL:0000222,6.22e-10,121;CL:0000723,1.47e-09,433;CL:0000034,4.55e-09,441;CL:0002582,4.85e-08,3;CL:0000346,1.37e-07,3;CL:1000428,1.37e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000514;2.30e-22;43!CL:0000355;1.32e-10;58 | |||
|ontology_enrichment_disease=DOID:2394!1.24e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:0060072;2.81e-10;4!DOID:0060084;1.89e-08;3!DOID:127;1.89e-08;3!DOID:2394;7.23e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0060072,2.29e-10,4;DOID:0060084,1.90e-08,3;DOID:127,1.90e-08,3;DOID:2394,5.82e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004290!2.78e-22!70;UBERON:0000914!5.78e-20!83;UBERON:0002329!5.78e-20!83;UBERON:0003077!5.78e-20!83;UBERON:0003059!5.78e-20!83;UBERON:0007282!5.78e-20!83;UBERON:0009618!5.78e-20!83;UBERON:0007285!5.78e-20!83;UBERON:0001637!3.47e-19!42;UBERON:0003509!3.47e-19!42;UBERON:0004572!3.47e-19!42;UBERON:0000486!3.83e-19!82;UBERON:0001134!2.25e-17!61;UBERON:0002036!2.25e-17!61;UBERON:0003082!2.25e-17!61;UBERON:0002385!2.97e-16!63;UBERON:0001015!2.97e-16!63;UBERON:0000383!2.97e-16!63;UBERON:0004573!1.02e-15!33;UBERON:0004571!1.02e-15!33;UBERON:0001981!1.04e-13!60;UBERON:0007500!1.04e-13!60;UBERON:0004537!1.04e-13!60;UBERON:0006965!1.04e-13!60;UBERON:0000055!1.48e-11!69;UBERON:0005256!3.11e-11!143;UBERON:0002049!2.71e-10!79;UBERON:0007798!2.71e-10!79;UBERON:0004872!6.05e-10!84;UBERON:0004237!4.79e-09!10;UBERON:0004695!4.79e-09!10;UBERON:0002111!4.79e-09!10;UBERON:0004178!4.79e-09!10;UBERON:0000490!5.05e-08!138;UBERON:0002100!1.22e-07!216;UBERON:0001135!1.85e-07!15;UBERON:0000947!2.88e-07!21;UBERON:0010191!2.88e-07!21;UBERON:0004535!5.20e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.20e-24;33!UBERON:0004571;7.20e-24;33!UBERON:0004237;2.42e-16;10!UBERON:0004695;2.42e-16;10!UBERON:0002111;2.42e-16;10!UBERON:0004178;2.42e-16;10!UBERON:0001637;2.54e-16;42!UBERON:0003509;2.54e-16;42!UBERON:0004572;2.54e-16;42!UBERON:0003834;1.84e-12;5!UBERON:0001533;1.84e-12;5!UBERON:0001135;2.95e-10;15!UBERON:0000947;4.70e-10;21!UBERON:0010191;4.70e-10;21!UBERON:0007500;1.99e-09;56!UBERON:0001981;1.99e-09;56!UBERON:0004537;1.99e-09;56!UBERON:0002067;5.67e-09;9!UBERON:0003513;9.78e-09;7!UBERON:0000412;1.09e-07;3!UBERON:0001992;1.09e-07;3!UBERON:0002072;1.45e-07;5!UBERON:0000055;1.54e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,2.24e-27,71;UBERON:0003059,2.24e-27,71;UBERON:0007282,2.24e-27,71;UBERON:0004290,2.24e-27,71;UBERON:0009618,2.24e-27,71;UBERON:0004573,4.26e-27,33;UBERON:0004571,4.26e-27,33;UBERON:0003077,7.46e-27,72;UBERON:0007285,7.46e-27,72;UBERON:0001637,1.31e-26,42;UBERON:0003509,1.31e-26,42;UBERON:0004572,1.31e-26,42;UBERON:0007524,2.40e-26,73;UBERON:0007503,5.23e-24,78;UBERON:0000486,5.87e-22,83;UBERON:0001134,1.42e-20,62;UBERON:0002036,1.42e-20,62;UBERON:0003082,1.42e-20,62;UBERON:0002385,1.12e-19,64;UBERON:0001015,1.12e-19,64;UBERON:0000383,1.12e-19,64;UBERON:0007500,2.41e-18,59;UBERON:0001981,2.41e-18,59;UBERON:0004537,2.41e-18,59;UBERON:0006965,2.41e-18,59;UBERON:0004237,1.28e-16,10;UBERON:0004695,1.28e-16,10;UBERON:0002111,1.28e-16,10;UBERON:0004178,1.28e-16,10;UBERON:0005256,5.16e-16,122;UBERON:0000055,6.09e-15,68;UBERON:0000490,5.03e-14,148;UBERON:0004872,2.76e-13,83;UBERON:0003834,1.97e-12,5;UBERON:0001533,1.97e-12,5;UBERON:0002049,4.08e-12,78;UBERON:0007798,4.08e-12,78;UBERON:0000926,5.85e-11,315;UBERON:0004120,5.85e-11,315;UBERON:0006603,5.85e-11,315;UBERON:0003104,1.59e-10,160;UBERON:0009142,1.59e-10,160;UBERON:0001135,1.97e-10,15;UBERON:0000947,3.50e-10,21;UBERON:0010191,3.50e-10,21;UBERON:0002067,5.74e-09,9;UBERON:0004016,5.74e-09,9;UBERON:0010083,5.74e-09,9;UBERON:0002100,6.55e-09,199;UBERON:0003513,1.02e-08,7;UBERON:0004535,2.55e-08,109;UBERON:0001009,6.49e-08,112;UBERON:0002072,1.22e-07,5;UBERON:0000412,1.37e-07,3;UBERON:0001992,1.37e-07,3;UBERON:0003914,3.04e-07,117 | |||
|phase1_expression=1.2717486548939,0.642301571672949,1.83240725324762,1.0007329835313,0.893922188854576,0,2.53299878168311,8.2123583545488,0,0.245733936501509,0,0,0,0.123766352960047,0.331397375727916,0.672325146451775,1.80808358407193,1.46062018077475,1.95173119516203,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0.376484679085209,0.272906150057846,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01392563272577,0,0,0.0945348171640679,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,1.72046919021225,0,0,0.838998872419812,0.275118041940067,0.626984899610432,0,0,0,0.402829317109147,1.52054421143703,0,0.367663080345869,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0.759783069987479,0.264818361626438,0.286836620748814,1.06400514659507,0,0,0.49333509683432,0,0,0,0,0,0,16.2323239951767,2.85235910772225,5.97794722207204,0.23486899728753,0.161872944368132,0.140450806702248,0,0.122834317311768,0.206651562351531,2.37600571456411,0.494533858557114,0.910161361938026,0.718618141816238,0,0.125118519871964,0,0.438977620880838,0,0.751190294532984,0,0.179389635688862,0,0.211931901159562,0,0.515262646192195,0,0.18611685633159,0,0.194874010322397,0,0.184099797284599,0.161646056818812,0,0.403008392910561,0,0,0,0,0.243947412259191,0.132529768321485,0.813357600086629,0.414644220061482,0.252320850875628,0.72995471815166,3.12899064659632,3.21620469096443,4.14404764057442,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15014803749563,0,0,1.03664057770386,0.720599767084807,0.37872730027914,0,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0.387815147273333,7.15312891703765,0.845302752556,0.797814349754612,0,0,0,0,0,0,0,0,0,0,1.20575750823834,0,0.399891964728228,0,0,0,0,1.14861935834114,1.42636905040718,0,0.205476322550383,0.179060963239896,0,0,0,0,4.31960861178188,2.60279707715243,0.773288812777695,0.502548796003046,1.91381625495949,0,0,0,0,0,0,0.623912584592421,0.356857977594324,0,0.468565659970853,3.61135319673263,2.27407504055985,1.03473071292505,0,0.921845842708516,2.08520674723399,0.195801157462741,0,0.206768026122887,0,0,0,0,0,0.496215615637554,0,0,0.640695746278505,0,0.64341568457443,0,1.69630663182921,7.28003073783821,4.27061211271807,11.4235974420397,4.53220475993841,0,0.40101294060657,0.0920809889358963,0.803701137152247,1.82091168006717,3.40923478894503,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,8.03419649220798,5.80024309752732,0.154048617114644,0,0.275673144969061,0.429680979473094,0,0.255679882248303,0.267096106940212,0,0,0,0,5.57814659156743,2.20368642781448,4.8792608911242,3.38836938193698,2.66153015158511,6.95946393660058,20.941636758743,1.28812398067792,0,0.316379424718726,0,0.511795582622668,0.42793898803392,5.72765846266686,1.56989728039846,0.179872457583315,0.274537029736055,0.235624804691373,2.22400729730648,3.17020642346017,0.421258456238981,0,9.26111260598881,7.39551027297288,1.09199929126389,3.53513579884282,3.39024349860728,2.2054613741845,10.6150236038595,16.661133639643,0.578775534266688,0.655894752046633,3.24656603140326,0.30982349809975,0.563391205064483,0.143411352204052,0,2.49669736036875,2.12856638442359,0.211107635297664,0.329294892959902,0.379473173765715,0,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0.296964680832639,0,0,0.844016498463076,2.67140892054974,0.16480387422676,0,0,0,0,0.102268682502155,0,0.622079175323615,0,0,0,0.0986434056369336,2.3948309234694,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,1.68835014075571,0,0,0,0,0,0,0.846452843541768,0.341826167541004,0,0.0897576444097721,0,0,0.732780747214898,0,0,0,0,0,0,1.00692952185506,0.189753732724185,0,0,0,0,0,0,0.176915129006678,1.83309043480088,0,0.123563938946503,0,0.067401132980677,0,1.1713222286267,0,0,0.485560759068186,0.394584402849391,0,0.61214552326098,0.126373159256976,0.300646838828985,0,1.32930774541437,0,0.627865836814451,0,0,0.970722711091971,0,0,0,0.34945333648406,1.37588825977293,0,0,0,0.387956065953678,0.441280633457501,0,3.42604811616877,2.98071917554485,0.189932387867636,0,0,0.213452994739353,0.799238438328521,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,1.44119953416961,0,0,0,0,0,0,0,0,0.964518890790115,0.825236619583403,0.415440338029185,0,0,0.546746009922222,0,0,0.157363764404994,0,0,0,0,0,0,38.0099721227599,6.91377192961014,21.2281784071116,0,0,0.681552087141687,0.566560457600628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0.122026264901963,0,0,0,0.124192805882767,0,0,0.3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| ||
|short_description=p1@ENST00000325090 | |||
}} | }} |
Latest revision as of 21:15, 29 July 2015
Short description: | p1@ENST00000325090 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000325090_5end |
Coexpression cluster: | C4330_leiomyoma_Smooth_Fibroblast_Preadipocyte_Mesenchymal_mesenchymal_Adipocyte |
Association with transcript: | 323bp_to_ENST00000325090_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.37e-31 | 32 |
smooth muscle cell | 2.44e-28 | 43 |
smooth muscle myoblast | 2.44e-28 | 43 |
muscle cell | 3.02e-24 | 55 |
electrically responsive cell | 8.78e-23 | 61 |
electrically active cell | 8.78e-23 | 61 |
muscle precursor cell | 1.46e-22 | 58 |
myoblast | 1.46e-22 | 58 |
multi-potent skeletal muscle stem cell | 1.46e-22 | 58 |
aortic smooth muscle cell | 1.28e-16 | 10 |
smooth muscle cell of the subclavian artery | 1.97e-12 | 5 |
multi fate stem cell | 6.13e-10 | 427 |
mesodermal cell | 6.22e-10 | 121 |
somatic stem cell | 1.47e-09 | 433 |
stem cell | 4.55e-09 | 441 |
visceral preadipocyte | 4.85e-08 | 3 |
hair follicle dermal papilla cell | 1.37e-07 | 3 |
stem cell of epidermis | 1.37e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
benign neoplasm | 2.29e-10 | 4 |
cell type benign neoplasm | 1.90e-08 | 3 |
leiomyoma | 1.90e-08 | 3 |
ovarian cancer | 5.82e-07 | 14 |