FFCP PHASE1:Hg19::chr3:42055874..42055894,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:42055874..42055894,- | |||
|coexpression_cluster_id=C1175 | |coexpression_cluster_id=C1175 | ||
|description=CAGE_peak_at_chr3:42055874..42055894,- | |description=CAGE_peak_at_chr3:42055874..42055894,- | ||
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|ontology_enrichment_celltype_v019_2=CL:0000623,1.95e-32,3;CL:0000825,1.95e-32,3;CL:0000738,1.81e-22,136;CL:0000771,3.93e-22,2;CL:0000838,7.59e-19,52;CL:0000542,1.82e-18,53;CL:0000051,1.82e-18,53;CL:0000037,9.14e-18,168;CL:0002031,2.26e-17,120;CL:0000988,9.57e-17,177;CL:0002032,1.99e-16,161;CL:0000837,1.99e-16,161;CL:0002087,9.73e-16,115;CL:0002393,2.79e-11,9;CL:0002397,2.79e-11,9;CL:0000791,2.14e-09,18;CL:0000789,2.14e-09,18;CL:0002420,2.14e-09,18;CL:0002419,2.14e-09,18;CL:0000790,2.14e-09,18;CL:0000097,3.44e-09,5;CL:0002028,3.44e-09,5;CL:0000625,4.80e-09,11;CL:0000236,1.73e-07,14;CL:0000134,4.06e-07,354;CL:0002320,6.30e-07,361;CL:0000084,8.18e-07,25;CL:0000827,8.18e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000051;5.75e-12;53!CL:0000790;1.79e-09;18 | |ontology_enrichment_development_v019=CL:0000051;5.75e-12;53!CL:0000790;1.79e-09;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.54e-10!102;UBERON:0003061!1.54e-10!102;UBERON:0002371!3.46e-10!80;UBERON:0002193!7.04e-10!112;UBERON:0001474!4.18e-09!86;UBERON:0002384!1.77e-08!375;UBERON:0004765!5.42e-07!101;UBERON:0001434!5.42e-07!101;UBERON:0002405!6.35e-07!115 | |ontology_enrichment_uberon=UBERON:0002390!1.54e-10!102;UBERON:0003061!1.54e-10!102;UBERON:0002371!3.46e-10!80;UBERON:0002193!7.04e-10!112;UBERON:0001474!4.18e-09!86;UBERON:0002384!1.77e-08!375;UBERON:0004765!5.42e-07!101;UBERON:0001434!5.42e-07!101;UBERON:0002405!6.35e-07!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr3:42055874..42055894,- | |short_description=p@chr3:42055874..42055894,- | ||
}} | }} |
Latest revision as of 20:58, 29 July 2015
Short description: | p@chr3:42055874..42055894, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:42055874..42055894, - |
Coexpression cluster: | C1175_Mast_CD14_Natural_CD19_Eosinophils_Basophils_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.95e-32 | 3 |
pro-NK cell | 1.95e-32 | 3 |
leukocyte | 1.81e-22 | 136 |
eosinophil | 3.93e-22 | 2 |
lymphoid lineage restricted progenitor cell | 7.59e-19 | 52 |
lymphocyte | 1.82e-18 | 53 |
common lymphoid progenitor | 1.82e-18 | 53 |
hematopoietic stem cell | 9.14e-18 | 168 |
hematopoietic lineage restricted progenitor cell | 2.26e-17 | 120 |
hematopoietic cell | 9.57e-17 | 177 |
hematopoietic oligopotent progenitor cell | 1.99e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.99e-16 | 161 |
nongranular leukocyte | 9.73e-16 | 115 |
intermediate monocyte | 2.79e-11 | 9 |
CD14-positive, CD16-positive monocyte | 2.79e-11 | 9 |
mature alpha-beta T cell | 2.14e-09 | 18 |
alpha-beta T cell | 2.14e-09 | 18 |
immature T cell | 2.14e-09 | 18 |
mature T cell | 2.14e-09 | 18 |
immature alpha-beta T cell | 2.14e-09 | 18 |
mast cell | 3.44e-09 | 5 |
basophil mast progenitor cell | 3.44e-09 | 5 |
CD8-positive, alpha-beta T cell | 4.80e-09 | 11 |
B cell | 1.73e-07 | 14 |
mesenchymal cell | 4.06e-07 | 354 |
connective tissue cell | 6.30e-07 | 361 |
T cell | 8.18e-07 | 25 |
pro-T cell | 8.18e-07 | 25 |