FFCP PHASE1:Hg19::chr3:25509887..25509890,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:25509887..25509890,+
|short_description=p@chr3:25509887..25509890,+
|description=CAGE_peak_at_chr3:25509887..25509890,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:25509887..25509890,+ | |||
|description=CAGE_peak_at_chr3:25509887..25509890,+ | |||
|id=chr3:25509887..25509890,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000319;4.05e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,4.18e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.92e-08;3!UBERON:0000358;4.05e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;3.31e-07;1!DOID:3030;4.05e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,3.52e-07,1;DOID:3030,4.18e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.50e-13!115;UBERON:0000073!1.12e-12!94;UBERON:0001016!1.12e-12!94;UBERON:0000119!4.34e-12!312;UBERON:0000483!8.83e-12!309;UBERON:0003056!9.61e-12!61;UBERON:0003075!2.14e-11!86;UBERON:0007284!2.14e-11!86;UBERON:0005743!4.01e-11!86;UBERON:0002346!1.02e-10!90;UBERON:0000955!5.21e-10!69;UBERON:0006238!5.21e-10!69;UBERON:0001017!5.60e-10!82;UBERON:0000481!1.42e-09!347;UBERON:0002780!2.21e-09!41;UBERON:0001890!2.21e-09!41;UBERON:0006240!2.21e-09!41;UBERON:0002616!2.49e-09!59;UBERON:0000153!5.37e-09!129;UBERON:0007811!5.37e-09!129;UBERON:0003080!5.91e-09!42;UBERON:0004121!1.04e-08!169;UBERON:0000477!1.18e-08!286;UBERON:0000033!1.19e-08!123;UBERON:0000924!2.18e-08!173;UBERON:0006601!2.18e-08!173;UBERON:0001893!7.77e-08!34;UBERON:0001049!1.49e-07!57;UBERON:0005068!1.49e-07!57;UBERON:0006241!1.49e-07!57;UBERON:0007135!1.49e-07!57;UBERON:0004111!1.79e-07!241;UBERON:0002791!2.08e-07!33;UBERON:0001869!2.70e-07!32;UBERON:0002020!3.12e-07!34;UBERON:0003528!3.12e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,6.92e-09,6;UBERON:0005388,6.92e-09,6;UBERON:0001802,6.92e-09,6;UBERON:0001456,2.27e-08,22;UBERON:0000941,8.27e-07,1;UBERON:0001785,8.27e-07,1;UBERON:0002464,8.27e-07,1;UBERON:0004904,8.27e-07,1;UBERON:0001021,8.27e-07,1;UBERON:0003902,8.27e-07,1;UBERON:0005425,8.27e-07,1;UBERON:0002084,8.75e-07,1;UBERON:0002082,8.75e-07,1;UBERON:0010226,8.75e-07,1 | |||
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| ||
|short_description=p@chr3:25509887..25509890,+ | |||
}} | }} |
Latest revision as of 20:14, 29 July 2015
Short description: | p@chr3:25509887..25509890, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:25509887..25509890, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 4.18e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
retina | 6.92e-09 | 6 |
photoreceptor array | 6.92e-09 | 6 |
posterior segment of eyeball | 6.92e-09 | 6 |
face | 2.27e-08 | 22 |
cranial nerve II | 8.27e-07 | 1 |
cranial nerve | 8.27e-07 | 1 |
nerve trunk | 8.27e-07 | 1 |
nerve connecting eye with brain | 8.27e-07 | 1 |
nerve | 8.27e-07 | 1 |
retinal neural layer | 8.27e-07 | 1 |
presumptive neural retina | 8.27e-07 | 1 |
heart left ventricle | 8.75e-07 | 1 |
cardiac ventricle | 8.75e-07 | 1 |
future cardiac ventricle | 8.75e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 3.52e-07 | 1 |
mucinous adenocarcinoma | 4.18e-07 | 1 |