FFCP PHASE1:Hg19::chr3:197206051..197206063,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:197206051..197206063,+ | |||
|coexpression_cluster_id=C139 | |||
|description=CAGE_peak_at_chr3:197206051..197206063,+ | |description=CAGE_peak_at_chr3:197206051..197206063,+ | ||
|id=chr3:197206051..197206063,+ | |id=chr3:197206051..197206063,+ | ||
|ontology_enrichment_celltype=CL:0002319!7.51e-22!25;CL:0000128!2.23e-16!7;CL:0000126!2.23e-16!7;CL:0000127!2.23e-16!7;CL:0002453!2.23e-16!7;CL:0002605!8.87e-15!3;CL:0000047!2.42e-14!8;CL:0002586!3.15e-14!3;CL:0000221!1.01e-13!71;CL:0000133!3.95e-13!59;CL:0000243!3.35e-12!15;CL:0000125!3.35e-12!15;CL:0000030!3.35e-12!15;CL:0000339!3.35e-12!15;CL:0000095!8.21e-11!17;CL:0000123!8.21e-11!17;CL:0000149!8.66e-11!4;CL:0000159!1.74e-09!2;CL:0000220!1.16e-07!246;CL:0002321!1.50e-07!248;CL:0000540!2.05e-07!6;CL:0000031!2.05e-07!6;CL:0000404!2.05e-07!6;CL:0002149!2.14e-07!6;CL:0002255!2.14e-07!6;CL:0000333!8.64e-07!41 | |ontology_enrichment_celltype=CL:0002319!7.51e-22!25;CL:0000128!2.23e-16!7;CL:0000126!2.23e-16!7;CL:0000127!2.23e-16!7;CL:0002453!2.23e-16!7;CL:0002605!8.87e-15!3;CL:0000047!2.42e-14!8;CL:0002586!3.15e-14!3;CL:0000221!1.01e-13!71;CL:0000133!3.95e-13!59;CL:0000243!3.35e-12!15;CL:0000125!3.35e-12!15;CL:0000030!3.35e-12!15;CL:0000339!3.35e-12!15;CL:0000095!8.21e-11!17;CL:0000123!8.21e-11!17;CL:0000149!8.66e-11!4;CL:0000159!1.74e-09!2;CL:0000220!1.16e-07!246;CL:0002321!1.50e-07!248;CL:0000540!2.05e-07!6;CL:0000031!2.05e-07!6;CL:0000404!2.05e-07!6;CL:0002149!2.14e-07!6;CL:0002255!2.14e-07!6;CL:0000333!8.64e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0000047;7.10e-34;2!CL:0002605;5.76e-23;3!CL:0000128;4.93e-22;7!CL:0000126;4.93e-22;7!CL:0000127;4.93e-22;7!CL:0002319;7.34e-22;25!CL:0002149;6.17e-12;6!CL:0002255;6.17e-12;6!CL:0000243;1.87e-09;15!CL:0000125;1.87e-09;15!CL:0000095;1.62e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,5.15e-23,3;CL:0000128,4.59e-22,7;CL:0000126,4.59e-22,7;CL:0000127,4.59e-22,7;CL:0002453,4.59e-22,7;CL:0002319,7.90e-22,25;CL:0000047,4.78e-19,8;CL:0002149,5.68e-12,6;CL:0002255,5.68e-12,6;CL:0000133,1.41e-09,59;CL:0000243,1.82e-09,15;CL:0000125,1.82e-09,15;CL:0000030,1.82e-09,15;CL:0000339,1.82e-09,15;CL:0000095,1.57e-08,17;CL:0000123,1.57e-08,17;CL:0000221,7.49e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000339;1.87e-09;15!CL:0000133;1.07e-07;59!UBERON:0005795;1.59e-07;10 | |||
|ontology_enrichment_disease=DOID:299!9.10e-08!25;DOID:3001!2.14e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:3001;6.17e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,5.68e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0001781!3.15e-14!3;UBERON:0001782!3.15e-14!3;UBERON:0005424!3.15e-14!3;UBERON:0005743!3.21e-12!86;UBERON:0000073!4.56e-12!94;UBERON:0001016!4.56e-12!94;UBERON:0007625!4.30e-10!11;UBERON:0000966!1.02e-08!5;UBERON:0005388!1.02e-08!5;UBERON:0001802!1.02e-08!5;UBERON:0001017!1.40e-08!82;UBERON:0004121!2.35e-07!169;UBERON:0000924!4.42e-07!173;UBERON:0006601!4.42e-07!173 | |ontology_enrichment_uberon=UBERON:0001781!3.15e-14!3;UBERON:0001782!3.15e-14!3;UBERON:0005424!3.15e-14!3;UBERON:0005743!3.21e-12!86;UBERON:0000073!4.56e-12!94;UBERON:0001016!4.56e-12!94;UBERON:0007625!4.30e-10!11;UBERON:0000966!1.02e-08!5;UBERON:0005388!1.02e-08!5;UBERON:0001802!1.02e-08!5;UBERON:0001017!1.40e-08!82;UBERON:0004121!2.35e-07!169;UBERON:0000924!4.42e-07!173;UBERON:0006601!4.42e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;6.78e-18;1!UBERON:0009842;6.78e-18;1!UBERON:0003704;6.78e-18;1!UBERON:0001171;6.78e-18;1!UBERON:0001172;6.78e-18;1!UBERON:0001280;7.92e-07;3!UBERON:0004647;7.92e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,6.23e-18,1;UBERON:0009842,6.23e-18,1;UBERON:0003704,6.23e-18,1;UBERON:0001171,6.23e-18,1;UBERON:0001172,6.23e-18,1;UBERON:0001017,5.69e-07,81;UBERON:0001280,7.70e-07,3;UBERON:0004647,7.70e-07,3;UBERON:0005171,7.70e-07,3 | |||
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| ||
|short_description=p@chr3:197206051..197206063,+ | |short_description=p@chr3:197206051..197206063,+ | ||
}} | }} |
Latest revision as of 19:58, 29 July 2015
Short description: | p@chr3:197206051..197206063, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:197206051..197206063, + |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 5.15e-23 | 3 |
oligodendrocyte | 4.59e-22 | 7 |
macroglial cell | 4.59e-22 | 7 |
astrocyte | 4.59e-22 | 7 |
oligodendrocyte precursor cell | 4.59e-22 | 7 |
neural cell | 7.90e-22 | 25 |
neuronal stem cell | 4.78e-19 | 8 |
epithelial cell of uterus | 5.68e-12 | 6 |
stromal cell of endometrium | 5.68e-12 | 6 |
neurectodermal cell | 1.41e-09 | 59 |
glial cell (sensu Vertebrata) | 1.82e-09 | 15 |
glial cell | 1.82e-09 | 15 |
glioblast | 1.82e-09 | 15 |
glioblast (sensu Vertebrata) | 1.82e-09 | 15 |
neuron associated cell | 1.57e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 1.57e-08 | 17 |
ectodermal cell | 7.49e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 6.23e-18 | 1 |
acinus | 6.23e-18 | 1 |
intrahepatic bile duct | 6.23e-18 | 1 |
portal lobule | 6.23e-18 | 1 |
hepatic acinus | 6.23e-18 | 1 |
central nervous system | 5.69e-07 | 81 |
liver parenchyma | 7.70e-07 | 3 |
liver lobule | 7.70e-07 | 3 |
hepatic duct | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 5.68e-12 | 6 |