FFCP PHASE1:Hg19::chr3:190025784..190025804,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:190025784..190025804,- | |||
|coexpression_cluster_id=C2736 | |||
|description=CAGE_peak_at_chr3:190025784..190025804,- | |description=CAGE_peak_at_chr3:190025784..190025804,- | ||
|id=chr3:190025784..190025804,- | |id=chr3:190025784..190025804,- | ||
|ontology_enrichment_celltype=CL:0000066!3.70e-35!254;CL:0000223!2.96e-22!59;CL:0002076!6.35e-17!43;CL:0002251!6.39e-10!21;CL:0000220!2.26e-09!246;CL:0002321!4.25e-09!248;CL:1000507!4.64e-07!12;CL:1000494!4.64e-07!12 | |ontology_enrichment_celltype=CL:0000066!3.70e-35!254;CL:0000223!2.96e-22!59;CL:0002076!6.35e-17!43;CL:0002251!6.39e-10!21;CL:0000220!2.26e-09!246;CL:0002321!4.25e-09!248;CL:1000507!4.64e-07!12;CL:1000494!4.64e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002076;8.52e-12;42!CL:0002166;2.44e-09;3!CL:0002159;6.83e-09;14!CL:0000064;3.18e-08;3!CL:0000067;3.18e-08;3!CL:0005012;3.18e-08;3!CL:0002304;3.18e-08;3!CL:0002149;1.10e-07;6!CL:0002255;1.10e-07;6!CL:0002251;2.21e-07;20!CL:0001014;7.43e-07;2!CL:0001016;7.43e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.17e-23,253;CL:0000223,1.37e-16,58;CL:0002076,2.21e-14,42;CL:0002166,2.70e-09,3;CL:0002321,6.19e-09,250;CL:0002159,7.09e-09,14;CL:0000064,3.32e-08,3;CL:0000067,3.32e-08,3;CL:0005012,3.32e-08,3;CL:0002304,3.32e-08,3;CL:0002149,1.37e-07,6;CL:0002255,1.37e-07,6;CL:0002251,2.24e-07,20;CL:0002077,3.56e-07,34;CL:0001014,6.68e-07,2;CL:0001016,6.68e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000223;2.28e-10;58 | |||
|ontology_enrichment_disease=DOID:305!2.11e-17!106;DOID:0050687!8.79e-16!143;DOID:162!2.75e-09!235;DOID:14566!5.69e-09!239;DOID:1749!4.76e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:120;1.85e-11;27!DOID:193;1.77e-10;29!DOID:299;1.02e-08;25!DOID:3001;1.10e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:120,1.42e-11,27;DOID:193,1.39e-10,29;DOID:299,1.18e-08,25;DOID:305,5.91e-08,106;DOID:0050687,1.17e-07,143;DOID:3001,1.37e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.38e-19!169;UBERON:0000925!3.38e-19!169;UBERON:0006595!3.38e-19!169;UBERON:0005911!1.59e-15!82;UBERON:0001007!2.98e-15!155;UBERON:0001555!2.98e-15!155;UBERON:0007026!2.98e-15!155;UBERON:0004921!3.04e-12!129;UBERON:0004185!3.04e-12!129;UBERON:0000466!8.11e-12!126;UBERON:0003929!2.03e-11!54;UBERON:0005177!3.74e-11!107;UBERON:0000077!1.02e-10!130;UBERON:0000481!1.76e-10!347;UBERON:0006554!8.27e-10!44;UBERON:0001041!1.46e-09!98;UBERON:0003104!2.04e-09!238;UBERON:0009142!2.04e-09!238;UBERON:0001008!2.16e-09!45;UBERON:0005172!1.00e-08!55;UBERON:0005173!1.00e-08!55;UBERON:0001048!3.25e-08!168;UBERON:0000464!9.46e-08!104;UBERON:0001004!9.65e-08!72;UBERON:0000922!4.25e-07!612;UBERON:0009497!4.51e-07!25;UBERON:0000015!4.51e-07!25;UBERON:0002423!4.51e-07!25;UBERON:0006235!4.51e-07!25;UBERON:0004161!4.51e-07!25;UBERON:0009773!4.64e-07!12;UBERON:0001231!4.64e-07!12;UBERON:0004810!4.64e-07!12;UBERON:0002417!5.80e-07!61;UBERON:0000916!5.80e-07!61;UBERON:0000923!7.26e-07!604;UBERON:0005291!7.26e-07!604;UBERON:0006598!7.26e-07!604;UBERON:0002532!7.26e-07!604;UBERON:0002050!8.83e-07!605;UBERON:0005423!8.83e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;3.18e-08;3!UBERON:0001775;3.18e-08;3!UBERON:0001708;4.46e-07;4!UBERON:0008895;4.46e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,1.10e-08,82;UBERON:0001778,3.32e-08,3;UBERON:0001775,3.32e-08,3;UBERON:0003929,1.63e-07,54;UBERON:0001708,4.81e-07,4;UBERON:0008895,4.81e-07,4;UBERON:0008814,8.52e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0.218441372130172,0,0,0.331397375727916,0,0,1.46062018077475,0.487932798790507,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03988298880475,2.88248216701333,1.49319135678314,0.196468613246569,1.45718115317017,2.22470665670658,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93260853163297,5.45492241181669,0.860413786167011,0,0,0.116193942869518,0,0,0.36497735907583,0,1.28648187638577,0,0,0,0.118306800039844,0,0.241011029883482,0.882351781859152,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,16.478154526838,8.84544495009863,1.18157981336281,0,2.33678033231916,0.686271241194102,3.84125998930189,0,0.904760751704678,0.0925884451585296,0,0,1.44331342025273,0.463721619900307,0.587043471179108,0.288732895522148,0,0,0,0,0,0,0,4.68669169933885,4.03157107677263,2.26840155587818,0,0,0.383382679165211,0,0,0,0,0,0,0.381988425558278,0,0,0,0.600686115687835,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41151501647669,0,2.49932477955143,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,2.20557117333613,1.47329582297434,0,0.182091168006717,0.262248829918848,0.451199612907412,1.92538342761037,0,1.46139224653261,1.58327443339314,0,0,0.215915916102139,0,0.541892875087706,0.501689773854853,1.78413391131527,1.66215201785745,0.895499018888713,0,0,0,0,0.325378394664303,0.309123034943167,0,0,0,5.20048196829217,0,0.096670718292122,0,0,0,0,0,0,0,5.2891172915513,2.11409074101617,0.127612712494584,2.8324178639554,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0,0,0,0.855877976067841,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,0.769776901804097,0.670302275535787,0,0.564862804660675,1.72202149068492,3.36942951335251,0.443430153536676,0.918893600827838,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.47748896947538,0,0,0,0,2.00355669041231,0,0.211125408127993,0.19924798825107,0,0,0,0.123084805461069,0,0.359473404589307,0.895105873378046,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0.796554137998498,0.254253650292766,0.236387681767936,0,0.583209226766509,0,0,0,0,0,0,0,0,1.67308493134324,0.0769502585037971,1.13942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,14.1368703233778,0.652931232636591,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0.19566461893209,0.971121518136371,0,0,0,0,0,0.103688191397247,0,1.323967823502,0,0,3.13070500632772,0,3.29763502836749,0.783939179315021,0.174118413160805,0.17472666824203,0.171986032471617,0.0967563312890851,0.292357268344742,0.0821154570532092,0.775912131907355,0,0.451961481561065,0,0.397429223405979,0.0633107959558787,0.586654148204409,0.160317640503067,0.213452994739353,0.19980960958213,1.00863292007874,0.114536596165916,0.171594997861965,0.576219191952599,0.124252535565433,3.29971648463514,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0.86661500537946,1.40106959247983,0.943649613958588,0.492137407573744,0.0846733320657845,0,0,0,0.275078873194468,0.415440338029185,4.04953004792701,3.86900977278975,0,0.335434687599266,0.0788057072991982,0.104909176269996,0.211200673038813,1.25501137532991,1.34340638123612,0,0,0,0,0,0,0,0,0,0,1.61207457045891,2.65013777824443,0,0,0.171086837884329,0,0.427149650270779,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0.138348634936231,0.624902039810533,0,0,0,0,0,0,0,0,0,0,0,1.14420034198462,0,0,0.295710299979268,0.796483835818512,0,1.39736661188633,0,0,1.04349012362347,1.6528336989694,2.66563648518157,0,0,2.90008504014719,0,0,0,0,0,0,0.192619830407303,0,1.30497145982606,0.226705925512272,0.231522474323834,0,0,0.308801447160972,0,0.176689145945881,0.192914038270915,0.337884881306145,2.81865670446741,0,2.12701969324168,0,0,0,0,1.31043939538565,1.2288645437686,1.47918486351039,0,0,0,0.567515953566836,0,1.11903606175556,0,0,0,0.157265941855896,0,1.01839517972415,2.55089904122019,0.247871528518004,1.11728983594649,0,0,0,0.352675943690684,0.3062454773532,0.0642292250964595,0,0,0,0,0,0,0,0,0.353909170043221,2.75142897782519,10.9749382842821,0,0,0,0.0752103283492573,0,0,0,3.60298218522213,0,0,0,0,0.0634158101939068,0,0,0,0.351742488719241,6.89917109253815,0,0,0,0,0.177404740325278,0.230467975111559,0.171488009437418,0,0,0.236387681767936,0,0.156986185701028,0,0.280272163313789,0.913158720509496,1.07963795609311,0,0.0714765441766563,0,0,0,0,0.4144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| ||
|short_description=p@chr3:190025784..190025804,- | |short_description=p@chr3:190025784..190025804,- | ||
}} | }} |
Latest revision as of 19:25, 29 July 2015
Short description: | p@chr3:190025784..190025804, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:190025784..190025804, - |
Coexpression cluster: | C2736_oral_immature_endometrial_serous_Keratinocyte_Mallassezderived_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.17e-23 | 253 |
endodermal cell | 1.37e-16 | 58 |
endo-epithelial cell | 2.21e-14 | 42 |
epithelial cell of Malassez | 2.70e-09 | 3 |
embryonic cell | 6.19e-09 | 250 |
general ecto-epithelial cell | 7.09e-09 | 14 |
ciliated cell | 3.32e-08 | 3 |
ciliated epithelial cell | 3.32e-08 | 3 |
multi-ciliated epithelial cell | 3.32e-08 | 3 |
non-pigmented ciliary epithelial cell | 3.32e-08 | 3 |
epithelial cell of uterus | 1.37e-07 | 6 |
stromal cell of endometrium | 1.37e-07 | 6 |
epithelial cell of alimentary canal | 2.24e-07 | 20 |
ecto-epithelial cell | 3.56e-07 | 34 |
CD1a-positive Langerhans cell | 6.68e-07 | 2 |
immature CD1a-positive Langerhans cell | 6.68e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
endo-epithelium | 1.10e-08 | 82 |
ciliary epithelium | 3.32e-08 | 3 |
ciliary body | 3.32e-08 | 3 |
gut epithelium | 1.63e-07 | 54 |
jaw skeleton | 4.81e-07 | 4 |
splanchnocranium | 4.81e-07 | 4 |
pharyngeal arch system | 8.52e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 1.42e-11 | 27 |
reproductive organ cancer | 1.39e-10 | 29 |
adenocarcinoma | 1.18e-08 | 25 |
carcinoma | 5.91e-08 | 106 |
cell type cancer | 1.17e-07 | 143 |
female reproductive endometrioid cancer | 1.37e-07 | 6 |