FFCP PHASE1:Hg19::chr3:190025518..190025532,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:190025518..190025532,- | |||
|coexpression_cluster_id=C2736 | |coexpression_cluster_id=C2736 | ||
|description=CAGE_peak_at_chr3:190025518..190025532,- | |description=CAGE_peak_at_chr3:190025518..190025532,- | ||
|id=chr3:190025518..190025532,- | |id=chr3:190025518..190025532,- | ||
|ontology_enrichment_celltype=CL:0001014;2.49e-11;2!CL:0001016;2.49e-11;2!CL:0002076;7.13e-09;42!CL:0002149;1.64e-08;6!CL:0002255;1.64e-08;6!CL:0002231;7.89e-08;3 | |ontology_enrichment_celltype=CL:0000066!2.69e-26!254;CL:0000223!1.16e-16!59;CL:0002076!1.35e-12!43 | ||
| | |ontology_enrichment_celltype_v019=CL:0001014;2.49e-11;2!CL:0001016;2.49e-11;2!CL:0002076;7.13e-09;42!CL:0002149;1.64e-08;6!CL:0002255;1.64e-08;6!CL:0002231;7.89e-08;3 | ||
|ontology_enrichment_disease=DOID:3001;1.64e-08;6!DOID:120;1.65e-08;27!DOID:193;7.41e-08;29!DOID:299;6.00e-07;25 | |ontology_enrichment_celltype_v019_2=CL:0001014,1.79e-11,2;CL:0001016,1.79e-11,2;CL:0002076,1.35e-10,42;CL:0000223,1.79e-10,58;CL:0000066,9.98e-09,253;CL:0002149,1.54e-08,6;CL:0002255,1.54e-08,6;CL:0002231,9.88e-08,3 | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!9.96e-16!106;DOID:0050687!1.52e-13!143;DOID:162!7.96e-09!235;DOID:14566!1.27e-08!239;DOID:193!1.30e-08!29;DOID:1749!1.40e-08!14;DOID:120!2.07e-08!27 | |||
|ontology_enrichment_disease_v019=DOID:3001;1.64e-08;6!DOID:120;1.65e-08;27!DOID:193;7.41e-08;29!DOID:299;6.00e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:120,1.45e-08,27;DOID:3001,1.54e-08,6;DOID:193,6.58e-08,29;DOID:299,5.92e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0005911!4.72e-13!82;UBERON:0004119!9.26e-13!169;UBERON:0000925!9.26e-13!169;UBERON:0006595!9.26e-13!169;UBERON:0003929!4.27e-11!54;UBERON:0001007!2.39e-09!155;UBERON:0001555!2.39e-09!155;UBERON:0007026!2.39e-09!155;UBERON:0000466!1.58e-07!126;UBERON:0009497!4.54e-07!25;UBERON:0000015!4.54e-07!25;UBERON:0002423!4.54e-07!25;UBERON:0006235!4.54e-07!25;UBERON:0004161!4.54e-07!25;UBERON:0000077!5.87e-07!130;UBERON:0005156!9.62e-07!59;UBERON:0000990!9.62e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003929,1.32e-07,54;UBERON:0008814,8.30e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,1.10864698731282,0.702678285545008,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0.386521706326594,3.27295344709002,0.573609190778008,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.269662616320329,0,0.38474715694639,0,0,0.4115740113314,0,3.80265104465493,0,1.18157981336281,0,1.22988438543114,1.02940686179115,1.97550513735526,1.1240175325762,0.502644862058154,0.370353780634118,0,0,0,0.34779121492523,0.234817388471643,0,0,0,0,0,0,0,0,0,0.335964256397719,1.13420077793909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,1.99945982364114,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0.271265023699736,0,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,2.00506470303285,1.19705285616665,0,0,0,0.451199612907412,0.770153371044148,0,0,0.422206515571503,0,0,0.215915916102139,0,0,0.501689773854853,0.509752546090077,0,0.447749509444357,0,0,0,0,0,0.412164046590889,0,0,0.574265537996172,0,0,0,0.154048617114644,0,0,0,0,0,0,2.31398881505369,0.960950336825531,0.255225424989168,0.910420027699949,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876901770507525,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0.86101074534246,1.68471475667626,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,1.66963057534359,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0.537063524026827,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,1.25481369850743,0.153900517007594,0.683652335082007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.59593032300897,0.979396848954886,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0.19566461893209,0.242780379534093,0.394584402849391,0,0,0,0,0,0,0.330991955875499,0,0,5.40758137456606,0,1.38847790668105,0.587954384486266,0.174118413160805,0.17472666824203,0,0,0.146178634172371,0.0821154570532092,0,0,0,0,0.19871461170299,0,0.782205530939212,0.240476460754601,0.213452994739353,0,0.288180834308212,0.343609788497747,0.514784993585894,0,0.248505071130865,0.707082103850386,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.247247575143499,0.337017719270924,0.688992370603241,0,0,0,0,0,0,2.69968669861801,1.5476039091159,0,0.670869375198532,0.0788057072991982,0,0.211200673038813,0.35857467866569,0.575745591958336,0,0,0,0,0,0,0,0,0,0,1.31897010310274,1.32506888912221,0.129282956361551,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0.457680136793847,0,0,0,0,0,0.621051827505038,0,0,1.5652351854352,0.751288044986092,1.52322084867518,0,0.181848659202559,0.751873899297419,0,0.398095888698616,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0.617602894321944,0,0.176689145945881,0,0,1.02496607435179,0,0.607719912354764,0,0,0,0,1.63804924423206,0.245772908753719,1.05656061679314,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0.157265941855896,0,1.18812770967818,1.91317428091515,0.495743057036009,0,0,0,0,1.05802783107205,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0,2.4260389891571,0,0,0,0.300841313397029,0,1.56302802246618,0,1.80149109261106,0,0,0,0,0,0,0,0,0.351742488719241,2.55524855279191,0,0,0,0,0.177404740325278,0,0,0,0,0.118193840883968,0,0.078493092850514,0,0.280272163313789,0,0.431855182437243,0.47775168788705,0,0,0,0,0,0.414432328326074,0.6828739083758,0,0,0.118332000730565,0,0,4.582137370881,0.31020638566432,0,0.447421727191169,0.098150233615243,0,0,0,0,0.485710993059139,0,0,0,0.11294608203896,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0,0,1.07132363163395,0.352894871715692,0.641930933513346,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.535928260312357,0,0,0.426467963801962,0.714193294391221,0.0645889098360061,0.124149428591716,0.897054900644907,0.0636471582781649,0,0.870866991587845,0,0,0,0,0.407016343054873,1.70763753404345,0,0.538951212639521,0,0.244482888365733,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,1.10864698731282,0.702678285545008,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0.386521706326594,3.27295344709002,0.573609190778008,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.269662616320329,0,0.38474715694639,0,0,0.4115740113314,0,3.80265104465493,0,1.18157981336281,0,1.22988438543114,1.02940686179115,1.97550513735526,1.1240175325762,0.502644862058154,0.370353780634118,0,0,0,0.34779121492523,0.234817388471643,0,0,0,0,0,0,0,0,0,0.335964256397719,1.13420077793909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,1.99945982364114,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0.271265023699736,0,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,2.00506470303285,1.19705285616665,0,0,0,0.451199612907412,0.770153371044148,0,0,0.422206515571503,0,0,0.215915916102139,0,0,0.501689773854853,0.509752546090077,0,0.447749509444357,0,0,0,0,0,0.412164046590889,0,0,0.574265537996172,0,0,0,0.154048617114644,0,0,0,0,0,0,2.31398881505369,0.960950336825531,0.255225424989168,0.910420027699949,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876901770507525,0,0,0.202910376962704,0.30982349809975,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0.86101074534246,1.68471475667626,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,1.66963057534359,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0.537063524026827,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,1.25481369850743,0.153900517007594,0.683652335082007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.59593032300897,0.979396848954886,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0.19566461893209,0.242780379534093,0.394584402849391,0,0,0,0,0,0,0.330991955875499,0,0,5.40758137456606,0,1.38847790668105,0.587954384486266,0.174118413160805,0.17472666824203,0,0,0.146178634172371,0.0821154570532092,0,0,0,0,0.19871461170299,0,0.782205530939212,0.240476460754601,0.213452994739353,0,0.288180834308212,0.343609788497747,0.514784993585894,0,0.248505071130865,0.707082103850386,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.247247575143499,0.337017719270924,0.688992370603241,0,0,0,0,0,0,2.69968669861801,1.5476039091159,0,0.670869375198532,0.0788057072991982,0,0.211200673038813,0.35857467866569,0.575745591958336,0,0,0,0,0,0,0,0,0,0,1.31897010310274,1.32506888912221,0.129282956361551,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0.457680136793847,0,0,0,0,0,0.621051827505038,0,0,1.5652351854352,0.751288044986092,1.52322084867518,0,0.181848659202559,0.751873899297419,0,0.398095888698616,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0.617602894321944,0,0.176689145945881,0,0,1.02496607435179,0,0.607719912354764,0,0,0,0,1.63804924423206,0.245772908753719,1.05656061679314,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0.157265941855896,0,1.18812770967818,1.91317428091515,0.495743057036009,0,0,0,0,1.05802783107205,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0,2.4260389891571,0,0,0,0.300841313397029,0,1.56302802246618,0,1.80149109261106,0,0,0,0,0,0,0,0,0.351742488719241,2.55524855279191,0,0,0,0,0.177404740325278,0,0,0,0,0.118193840883968,0,0.078493092850514,0,0.280272163313789,0,0.431855182437243,0.47775168788705,0,0,0,0,0,0.414432328326074,0.6828739083758,0,0,0.118332000730565,0,0,4.582137370881,0.31020638566432,0,0.447421727191169,0.098150233615243,0,0,0,0,0.485710993059139,0,0,0,0.11294608203896,0,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0,0,1.07132363163395,0.352894871715692,0.641930933513346,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.535928260312357,0,0,0.426467963801962,0.714193294391221,0.0645889098360061,0.124149428591716,0.897054900644907,0.0636471582781649,0,0.870866991587845,0,0,0,0,0.407016343054873,1.70763753404345,0,0.538951212639521,0,0.244482888365733,0,0,0,0 | ||
|short_description=p@chr3:190025518..190025532,- | |short_description=p@chr3:190025518..190025532,- | ||
}} | }} |
Latest revision as of 19:25, 29 July 2015
Short description: | p@chr3:190025518..190025532, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:190025518..190025532, - |
Coexpression cluster: | C2736_oral_immature_endometrial_serous_Keratinocyte_Mallassezderived_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.79e-11 | 2 |
immature CD1a-positive Langerhans cell | 1.79e-11 | 2 |
endo-epithelial cell | 1.35e-10 | 42 |
endodermal cell | 1.79e-10 | 58 |
epithelial cell | 9.98e-09 | 253 |
epithelial cell of uterus | 1.54e-08 | 6 |
stromal cell of endometrium | 1.54e-08 | 6 |
epithelial cell of prostate | 9.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
gut epithelium | 1.32e-07 | 54 |
pharyngeal arch system | 8.30e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 1.45e-08 | 27 |
female reproductive endometrioid cancer | 1.54e-08 | 6 |
reproductive organ cancer | 6.58e-08 | 29 |
adenocarcinoma | 5.92e-07 | 25 |